RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 VWA8A3KMH1 1905 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 O00370 1275 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 TBC1D4O60343 1298 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 SNX3O60493 162 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 GREM1O60565 184 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 CALB1P05937 261 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 ABHD2P08910 425 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 ARPP19P56211 112 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 COPS2P61201 443 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 NOMO3P69849 1222 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 ACY1Q03154 408 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 SUZ12Q15022 739 aaKnown RBP11.78□□□□□ -0.52
LINC00538-201ENST00000626109 CCDC85BQ15834 202 aaPredicted RBP11.78□□□□□ -0.52
LINC00538-201ENST00000626109 DBN1Q16643 649 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 KYNUQ16719 465 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 SMUG1Q53HV7 270 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 SLC8B1Q6J4K2 584 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 DRICH1Q6PGQ1 229 aaPredicted RBP11.78□□□□□ -0.52
LINC00538-201ENST00000626109 ZSCAN18Q8TBC5 510 aaPredicted RBP11.78□□□□□ -0.52
LINC00538-201ENST00000626109 CKAP2Q8WWK9 683 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 ATG4AQ8WYN0 398 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 CASP10Q92851 521 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 GIMAP5Q96F15 307 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 THOC1Q96FV9 657 aaKnown RBP11.78□□□□□ -0.52
LINC00538-201ENST00000626109 TREX2Q9BQ50 279 aaPredicted RBP11.78□□□□□ -0.52
LINC00538-201ENST00000626109 OCSTAMPQ9BR26 566 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 IRAK3Q9Y616 596 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 EPOPA6NHQ4 379 aa11.77□□□□□ -0.53
LINC00538-201ENST00000626109 MED7O43513 233 aa11.77□□□□□ -0.53
LINC00538-201ENST00000626109 LSM8O95777 96 aaKnown RBP11.77□□□□□ -0.53
LINC00538-201ENST00000626109 OR4Q2P0C623 313 aa11.77□□□□□ -0.53
LINC00538-201ENST00000626109 BRAFP15056 766 aa11.77□□□□□ -0.53
LINC00538-201ENST00000626109 STX2P32856 288 aa11.77□□□□□ -0.53
LINC00538-201ENST00000626109 NDUFV1P49821 464 aa11.77□□□□□ -0.53
LINC00538-201ENST00000626109 AFF3P51826 1226 aaKnown RBP11.77□□□□□ -0.53
LINC00538-201ENST00000626109 USP46P62068 366 aa11.77□□□□□ -0.53
LINC00538-201ENST00000626109 STILQ15468 1287 aa11.77□□□□□ -0.53
LINC00538-201ENST00000626109 TRIP13Q15645 432 aaPredicted RBP11.77□□□□□ -0.53
LINC00538-201ENST00000626109 SLC39A12Q504Y0 691 aa11.77□□□□□ -0.53
LINC00538-201ENST00000626109 MDH1BQ5I0G3 518 aa11.77□□□□□ -0.53
LINC00538-201ENST00000626109 LRRC38Q5VT99 294 aa11.77□□□□□ -0.53
LINC00538-201ENST00000626109 IZUMO3Q5VZ72 239 aa11.77□□□□□ -0.53
LINC00538-201ENST00000626109 PTRH1Q86Y79 214 aaKnown RBP11.77□□□□□ -0.53
LINC00538-201ENST00000626109 MRPL43Q8N983 215 aaKnown RBP11.77□□□□□ -0.53
LINC00538-201ENST00000626109 ANKRD53Q8N9V6 530 aa11.77□□□□□ -0.53
LINC00538-201ENST00000626109 CCDC63Q8NA47 563 aa11.77□□□□□ -0.53
LINC00538-201ENST00000626109 TMEM209Q96SK2 561 aa11.77□□□□□ -0.53
LINC00538-201ENST00000626109 C11orf70Q9BRQ4 267 aa11.77□□□□□ -0.53
LINC00538-201ENST00000626109 HEMGNQ9BXL5 484 aa11.77□□□□□ -0.53
LINC00538-201ENST00000626109 RXFP1Q9HBX9 757 aa11.77□□□□□ -0.53
LINC00538-201ENST00000626109 WASH6PQ9NQA3 447 aa11.77□□□□□ -0.53
LINC00538-201ENST00000626109 FAM49BQ9NUQ9 324 aa11.77□□□□□ -0.53
LINC00538-201ENST00000626109 NINJ2Q9NZG7 142 aa11.77□□□□□ -0.53
LINC00538-201ENST00000626109 MARK1Q9P0L2 795 aa11.77□□□□□ -0.53
LINC00538-201ENST00000626109 SLC12A4Q9UP95 1085 aa11.77□□□□□ -0.53
LINC00538-201ENST00000626109 ARL2BPQ9Y2Y0 163 aa11.77□□□□□ -0.53
LINC00538-201ENST00000626109 NEU2Q9Y3R4 380 aa11.77□□□□□ -0.53
LINC00538-201ENST00000626109 A0A087X0M5 115 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 A0A1B0GX30 115 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 MYBPHLA2RUH7 354 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 RGSL1A5PLK6 1076 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 TCP11X1B4DZS4 312 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 STMND1H3BQB6 276 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 TP73O15350 636 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 MGRN1O60291 552 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 ADH1AP07327 375 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 TPP2P29144 1249 aaPredicted RBP11.76□□□□□ -0.53
LINC00538-201ENST00000626109 OR1D2P34982 312 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 IL9RQ01113 521 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 SMARCB1Q12824 385 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 ADAM15Q13444 863 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 CAMK1Q14012 370 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 BBS9Q3SYG4 887 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 FNDC3BQ53EP0 1204 aaKnown RBP11.76□□□□□ -0.53
LINC00538-201ENST00000626109 ZNF697Q5TEC3 545 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 YOD1Q5VVQ6 348 aaPredicted RBP11.76□□□□□ -0.53
LINC00538-201ENST00000626109 ARHGAP17Q68EM7 881 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 FAM171BQ6P995 826 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 IL27RAQ6UWB1 636 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 RSPO2Q6UXX9 243 aaPredicted RBP11.76□□□□□ -0.53
LINC00538-201ENST00000626109 ZCCHC9Q8N567 271 aaKnown RBP11.76□□□□□ -0.53
LINC00538-201ENST00000626109 C12orf29Q8N999 325 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 KISS1RQ969F8 398 aaPredicted RBP11.76□□□□□ -0.53
LINC00538-201ENST00000626109 MYLPFQ96A32 169 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 RHOVQ96L33 236 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 MAGEB18Q96M61 343 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 CLSTN3Q9BQT9 956 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 MED10Q9BTT4 135 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 CCDC106Q9BWC9 280 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 ZNF518BQ9C0D4 1074 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 INTS7Q9NVH2 962 aaKnown RBP11.76□□□□□ -0.53
LINC00538-201ENST00000626109 TBC1D14Q9P2M4 693 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 PCDHGB4Q9UN71 923 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 DRG1Q9Y295 367 aaKnown RBP11.76□□□□□ -0.53
LINC00538-201ENST00000626109 CAB39Q9Y376 341 aaPredicted RBP11.76□□□□□ -0.53
LINC00538-201ENST00000626109 SPO11Q9Y5K1 396 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 C2orf71A6NGG8 1288 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 MEN1O00255 615 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 TEX28O15482 410 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms