RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 TADA1Q96BN2 335 aa18.81■□□□□ 0.6
SSBP4-212ENST00000601919 CHFRQ96EP1 664 aa18.81■□□□□ 0.6
SSBP4-212ENST00000601919 IFT43Q96FT9 208 aa18.81■□□□□ 0.6
SSBP4-212ENST00000601919 MRGPRX3Q96LB0 322 aa18.81■□□□□ 0.6
SSBP4-212ENST00000601919 SERPINB12Q96P63 405 aa18.81■□□□□ 0.6
SSBP4-212ENST00000601919 TBL1YQ9BQ87 522 aa18.81■□□□□ 0.6
SSBP4-212ENST00000601919 GORASP1Q9BQQ3 440 aa18.81■□□□□ 0.6
SSBP4-212ENST00000601919 TM6SF2Q9BZW4 377 aa18.81■□□□□ 0.6
SSBP4-212ENST00000601919 ARFGAP3Q9NP61 516 aa18.81■□□□□ 0.6
SSBP4-212ENST00000601919 SLCO3A1Q9UIG8 710 aa18.81■□□□□ 0.6
SSBP4-212ENST00000601919 STARD13Q9Y3M8 1113 aa18.81■□□□□ 0.6
SSBP4-212ENST00000601919 POP4O95707 220 aaKnown RBP18.8■□□□□ 0.6
SSBP4-212ENST00000601919 MMP2P08253 660 aa18.8■□□□□ 0.6
SSBP4-212ENST00000601919 H2AFXP16104 143 aaPredicted RBP18.8■□□□□ 0.6
SSBP4-212ENST00000601919 DRD1P21728 446 aa18.8■□□□□ 0.6
SSBP4-212ENST00000601919 RGRP47804 291 aa18.8■□□□□ 0.6
SSBP4-212ENST00000601919 ZP2Q05996 745 aa18.8■□□□□ 0.6
SSBP4-212ENST00000601919 GRSF1Q12849 480 aaKnown RBP eCLIP18.8■□□□□ 0.6
SSBP4-212ENST00000601919 PCSK7Q16549 785 aa18.8■□□□□ 0.6
SSBP4-212ENST00000601919 PTPRNQ16849 979 aa18.8■□□□□ 0.6
SSBP4-212ENST00000601919 DGKKQ5KSL6 1271 aa18.8■□□□□ 0.6
SSBP4-212ENST00000601919 ATXN7L2Q5T6C5 722 aaPredicted RBP18.8■□□□□ 0.6
SSBP4-212ENST00000601919 NCEH1Q6PIU2 408 aa18.8■□□□□ 0.6
SSBP4-212ENST00000601919 KDELC1Q6UW63 502 aa18.8■□□□□ 0.6
SSBP4-212ENST00000601919 DNAAF3Q8N9W5 541 aa18.8■□□□□ 0.6
SSBP4-212ENST00000601919 KCNV2Q8TDN2 545 aa18.8■□□□□ 0.6
SSBP4-212ENST00000601919 FEM1CQ96JP0 617 aa18.8■□□□□ 0.6
SSBP4-212ENST00000601919 TUBGCP5Q96RT8 1024 aa18.8■□□□□ 0.6
SSBP4-212ENST00000601919 ATP13A3Q9H7F0 1226 aa18.8■□□□□ 0.6
SSBP4-212ENST00000601919 HEBP1Q9NRV9 189 aa18.8■□□□□ 0.6
SSBP4-212ENST00000601919 DUSP12Q9UNI6 340 aa18.8■□□□□ 0.6
SSBP4-212ENST00000601919 DHX9Q08211 1270 aaKnown RBP18.79■□□□□ 0.6
SSBP4-212ENST00000601919 MESP2Q0VG99 397 aa18.79■□□□□ 0.6
SSBP4-212ENST00000601919 CDH17Q12864 832 aa18.79■□□□□ 0.6
SSBP4-212ENST00000601919 CBLBQ13191 982 aa18.79■□□□□ 0.6
SSBP4-212ENST00000601919 SPARCL1Q14515 664 aa18.79■□□□□ 0.6
SSBP4-212ENST00000601919 SERPINA13PQ6UXR4 307 aa18.79■□□□□ 0.6
SSBP4-212ENST00000601919 LRRC39Q96DD0 335 aa18.79■□□□□ 0.6
SSBP4-212ENST00000601919 MRGPRX2Q96LB1 330 aa18.79■□□□□ 0.6
SSBP4-212ENST00000601919 FICDQ9BVA6 458 aa18.79■□□□□ 0.6
SSBP4-212ENST00000601919 ADGRE3Q9BY15 652 aa18.79■□□□□ 0.6
SSBP4-212ENST00000601919 TNKS2Q9H2K2 1166 aa18.79■□□□□ 0.6
SSBP4-212ENST00000601919 CASS4Q9NQ75 786 aa18.79■□□□□ 0.6
SSBP4-212ENST00000601919 BFARQ9NZS9 450 aa18.79■□□□□ 0.6
SSBP4-212ENST00000601919 THAP10Q9P2Z0 257 aaPredicted RBP18.79■□□□□ 0.6
SSBP4-212ENST00000601919 HECAQ9UBI9 543 aaPredicted RBP18.79■□□□□ 0.6
SSBP4-212ENST00000601919 SUN2Q9UH99 717 aa18.79■□□□□ 0.6
SSBP4-212ENST00000601919 SORCS3Q9UPU3 1222 aa18.79■□□□□ 0.6
SSBP4-212ENST00000601919 C5orf42Q9H799 3197 aa18.79■□□□□ 0.6
SSBP4-212ENST00000601919 EDDM13A0A1B0GTR0 161 aa18.78■□□□□ 0.6
SSBP4-212ENST00000601919 MAN2B1O00754 1011 aa18.78■□□□□ 0.6
SSBP4-212ENST00000601919 SOCS5O75159 536 aa18.78■□□□□ 0.6
SSBP4-212ENST00000601919 ZNF821O75541 412 aaPredicted RBP18.78■□□□□ 0.6
SSBP4-212ENST00000601919 FAM153BP0C7A2 387 aa18.78■□□□□ 0.6
SSBP4-212ENST00000601919 HNRNPLP14866 589 aaKnown RBP eCLIP18.78■□□□□ 0.6
SSBP4-212ENST00000601919 HLA-DPA1P20036 260 aa18.78■□□□□ 0.6
SSBP4-212ENST00000601919 SERPINA4P29622 427 aa18.78■□□□□ 0.6
SSBP4-212ENST00000601919 ADRA1AP35348 466 aa18.78■□□□□ 0.6
SSBP4-212ENST00000601919 NPY2RP49146 381 aa18.78■□□□□ 0.6
SSBP4-212ENST00000601919 CDK18Q07002 472 aa18.78■□□□□ 0.6
SSBP4-212ENST00000601919 BCL2L1Q07817 233 aa18.78■□□□□ 0.6
SSBP4-212ENST00000601919 PDIA2Q13087 525 aaKnown RBP18.78■□□□□ 0.6
SSBP4-212ENST00000601919 ZNF234Q14588 700 aa18.78■□□□□ 0.6
SSBP4-212ENST00000601919 MYLK3Q32MK0 819 aa18.78■□□□□ 0.6
SSBP4-212ENST00000601919 FAM153CQ494X1 144 aa18.78■□□□□ 0.6
SSBP4-212ENST00000601919 SLC44A4Q53GD3 710 aa18.78■□□□□ 0.6
SSBP4-212ENST00000601919 TMEM196Q5HYL7 178 aa18.78■□□□□ 0.6
SSBP4-212ENST00000601919 NAIF1Q69YI7 327 aaPredicted RBP18.78■□□□□ 0.6
SSBP4-212ENST00000601919 RANBP10Q6VN20 620 aa18.78■□□□□ 0.6
SSBP4-212ENST00000601919 Q6ZVU0 165 aa18.78■□□□□ 0.6
SSBP4-212ENST00000601919 CAND1Q86VP6 1230 aaKnown RBP18.78■□□□□ 0.6
SSBP4-212ENST00000601919 RNF135Q8IUD6 432 aa18.78■□□□□ 0.6
SSBP4-212ENST00000601919 RELL1Q8IUW5 271 aa18.78■□□□□ 0.6
SSBP4-212ENST00000601919 FRS2Q8WU20 508 aa18.78■□□□□ 0.6
SSBP4-212ENST00000601919 ATXN2LQ8WWM7 1075 aaKnown RBP18.78■□□□□ 0.6
SSBP4-212ENST00000601919 MYO19Q96H55 970 aa18.78■□□□□ 0.6
SSBP4-212ENST00000601919 CPEB1Q9BZB8 566 aaKnown RBP18.78■□□□□ 0.6
SSBP4-212ENST00000601919 SAYSD1Q9NPB0 183 aa18.78■□□□□ 0.6
SSBP4-212ENST00000601919 EVLQ9UI08 416 aaPredicted RBP18.78■□□□□ 0.6
SSBP4-212ENST00000601919 RAI2Q9Y5P3 530 aa18.78■□□□□ 0.6
SSBP4-212ENST00000601919 LOC285095A0A1B0GVY8 99 aa18.77■□□□□ 0.6
SSBP4-212ENST00000601919 A0A1W2PQ67 120 aa18.77■□□□□ 0.6
SSBP4-212ENST00000601919 TTC24A2A3L6 582 aaPredicted RBP18.77■□□□□ 0.6
SSBP4-212ENST00000601919 SDR42E2A6NKP2 422 aa18.77■□□□□ 0.6
SSBP4-212ENST00000601919 TTC34A8MYJ7 566 aa18.77■□□□□ 0.6
SSBP4-212ENST00000601919 E7ESA3 106 aa18.77■□□□□ 0.6
SSBP4-212ENST00000601919 NARSO43776 548 aaKnown RBP18.77■□□□□ 0.6
SSBP4-212ENST00000601919 BNIP3LO60238 219 aa18.77■□□□□ 0.6
SSBP4-212ENST00000601919 NDST3O95803 873 aa18.77■□□□□ 0.6
SSBP4-212ENST00000601919 AGTP01019 485 aa18.77■□□□□ 0.6
SSBP4-212ENST00000601919 FGF1P05230 155 aa18.77■□□□□ 0.6
SSBP4-212ENST00000601919 MAGEA3P43357 314 aa18.77■□□□□ 0.6
SSBP4-212ENST00000601919 CCNHP51946 323 aaPredicted RBP18.77■□□□□ 0.6
SSBP4-212ENST00000601919 PON2Q15165 354 aa18.77■□□□□ 0.6
SSBP4-212ENST00000601919 HNRNPA1L2Q32P51 320 aaKnown RBP18.77■□□□□ 0.6
SSBP4-212ENST00000601919 BBS9Q3SYG4 887 aa18.77■□□□□ 0.6
SSBP4-212ENST00000601919 FNBP1LQ5T0N5 605 aa18.77■□□□□ 0.6
SSBP4-212ENST00000601919 ARMC3Q5W041 872 aa18.77■□□□□ 0.6
SSBP4-212ENST00000601919 FBXO38Q6PIJ6 1188 aa18.77■□□□□ 0.6
SSBP4-212ENST00000601919 TRMT11Q7Z4G4 463 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms