RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 PILRBQ9UKJ0 227 aa26.11■■□□□ 1.77
TRIM28-204ENST00000594806 HEY1Q9Y5J3 304 aa26.11■■□□□ 1.77
TRIM28-204ENST00000594806 MYO15AQ9UKN7 3530 aa26.1■■□□□ 1.77
TRIM28-204ENST00000594806 hCG_1818297A0A087WSY0 165 aa26.1■■□□□ 1.77
TRIM28-204ENST00000594806 PPP1R12AO14974 1030 aaPredicted RBP26.1■■□□□ 1.77
TRIM28-204ENST00000594806 CST8O60676 142 aa26.1■■□□□ 1.77
TRIM28-204ENST00000594806 ZNF806P0C7X5 589 aa26.1■■□□□ 1.77
TRIM28-204ENST00000594806 PTPN7P35236 360 aa26.1■■□□□ 1.77
TRIM28-204ENST00000594806 MMP13P45452 471 aa26.1■■□□□ 1.77
TRIM28-204ENST00000594806 CCR5P51681 352 aa26.1■■□□□ 1.77
TRIM28-204ENST00000594806 METAP1P53582 386 aa26.1■■□□□ 1.77
TRIM28-204ENST00000594806 AP1S1P61966 158 aa26.1■■□□□ 1.77
TRIM28-204ENST00000594806 PPIDQ08752 370 aaKnown RBP26.1■■□□□ 1.77
TRIM28-204ENST00000594806 CSRP2Q16527 193 aa26.1■■□□□ 1.77
TRIM28-204ENST00000594806 POM121L1PQ3SYA9 428 aa26.1■■□□□ 1.77
TRIM28-204ENST00000594806 PIP5KL1Q5T9C9 394 aa26.1■■□□□ 1.77
TRIM28-204ENST00000594806 DCAF12L1Q5VU92 463 aa26.1■■□□□ 1.77
TRIM28-204ENST00000594806 KIAA0895LQ68EN5 471 aa26.1■■□□□ 1.77
TRIM28-204ENST00000594806 DEFB119Q8N690 84 aa26.1■■□□□ 1.77
TRIM28-204ENST00000594806 OR6K2Q8NGY2 324 aa26.1■■□□□ 1.77
TRIM28-204ENST00000594806 CEP76Q8TAP6 659 aa26.1■■□□□ 1.77
TRIM28-204ENST00000594806 PIGKQ92643 395 aa26.1■■□□□ 1.77
TRIM28-204ENST00000594806 C6orf106Q9H6K1 298 aaPredicted RBP26.1■■□□□ 1.77
TRIM28-204ENST00000594806 PREBQ9HCU5 417 aa26.1■■□□□ 1.77
TRIM28-204ENST00000594806 PPP2R2CQ9Y2T4 447 aa26.1■■□□□ 1.77
TRIM28-204ENST00000594806 CAPN6Q9Y6Q1 641 aa26.1■■□□□ 1.77
TRIM28-204ENST00000594806 UGT2B4P06133 528 aa26.09■■□□□ 1.77
TRIM28-204ENST00000594806 GNSP15586 552 aa26.09■■□□□ 1.77
TRIM28-204ENST00000594806 CES1P23141 567 aa26.09■■□□□ 1.77
TRIM28-204ENST00000594806 ITPKAP23677 461 aa26.09■■□□□ 1.77
TRIM28-204ENST00000594806 HOXD11P31277 338 aaPredicted RBP26.09■■□□□ 1.77
TRIM28-204ENST00000594806 NUDT1P36639 197 aa26.09■■□□□ 1.77
TRIM28-204ENST00000594806 FBXL19Q6PCT2 694 aa26.09■■□□□ 1.77
TRIM28-204ENST00000594806 NCEH1Q6PIU2 408 aa26.09■■□□□ 1.77
TRIM28-204ENST00000594806 ARMCX6Q7L4S7 300 aa26.09■■□□□ 1.77
TRIM28-204ENST00000594806 CCDC13Q8IYE1 715 aa26.09■■□□□ 1.77
TRIM28-204ENST00000594806 CCNYQ8ND76 341 aa26.09■■□□□ 1.77
TRIM28-204ENST00000594806 EXOC2Q96KP1 924 aa26.09■■□□□ 1.77
TRIM28-204ENST00000594806 OLFM3Q96PB7 478 aa26.09■■□□□ 1.77
TRIM28-204ENST00000594806 ALS2CR12Q96Q35 445 aa26.09■■□□□ 1.77
TRIM28-204ENST00000594806 MGME1Q9BQP7 344 aa26.09■■□□□ 1.77
TRIM28-204ENST00000594806 ZBTB32Q9Y2Y4 487 aaPredicted RBP26.09■■□□□ 1.77
TRIM28-204ENST00000594806 TBC1D3DA0A087WVF3 549 aa26.08■■□□□ 1.77
TRIM28-204ENST00000594806 TBC1D3IA0A087WXS9 549 aa26.08■■□□□ 1.77
TRIM28-204ENST00000594806 TBC1D3EA0A087X179 549 aa26.08■■□□□ 1.77
TRIM28-204ENST00000594806 TBC1D3KA0A087X1G2 549 aa26.08■■□□□ 1.77
TRIM28-204ENST00000594806 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP26.08■■□□□ 1.77
TRIM28-204ENST00000594806 TBC1D3FA6NER0 549 aaPredicted RBP26.08■■□□□ 1.77
TRIM28-204ENST00000594806 C10orf142B7Z368 130 aa26.08■■□□□ 1.77
TRIM28-204ENST00000594806 TBC1D3LB9A6J9 549 aa26.08■■□□□ 1.77
TRIM28-204ENST00000594806 TBC1D3HP0C7X1 549 aa26.08■■□□□ 1.77
TRIM28-204ENST00000594806 KRT10P13645 584 aa26.08■■□□□ 1.77
TRIM28-204ENST00000594806 ADRB3P13945 408 aa26.08■■□□□ 1.77
TRIM28-204ENST00000594806 GKP32189 559 aa26.08■■□□□ 1.77
TRIM28-204ENST00000594806 SUOXP51687 545 aa26.08■■□□□ 1.77
TRIM28-204ENST00000594806 SPEM2Q0P670 501 aa26.08■■□□□ 1.77
TRIM28-204ENST00000594806 KAZNQ674X7 775 aa26.08■■□□□ 1.77
TRIM28-204ENST00000594806 TBC1D3GQ6DHY5 549 aa26.08■■□□□ 1.77
TRIM28-204ENST00000594806 TBC1D3CQ6IPX1 549 aa26.08■■□□□ 1.77
TRIM28-204ENST00000594806 BBS12Q6ZW61 710 aa26.08■■□□□ 1.77
TRIM28-204ENST00000594806 ZSCAN30Q86W11 494 aa26.08■■□□□ 1.77
TRIM28-204ENST00000594806 RGL4Q8IZJ4 473 aa26.08■■□□□ 1.77
TRIM28-204ENST00000594806 TBC1D3Q8IZP1 549 aaPredicted RBP26.08■■□□□ 1.77
TRIM28-204ENST00000594806 DCLK2Q8N568 766 aa26.08■■□□□ 1.77
TRIM28-204ENST00000594806 VOPP1Q96AW1 172 aa26.08■■□□□ 1.77
TRIM28-204ENST00000594806 HES6Q96HZ4 224 aa26.08■■□□□ 1.77
TRIM28-204ENST00000594806 KLHL32Q96NJ5 620 aa26.08■■□□□ 1.77
TRIM28-204ENST00000594806 NUDCD1Q96RS6 583 aa26.08■■□□□ 1.77
TRIM28-204ENST00000594806 ATP13A3Q9H7F0 1226 aa26.08■■□□□ 1.77
TRIM28-204ENST00000594806 SEMA4GQ9NTN9 838 aa26.08■■□□□ 1.77
TRIM28-204ENST00000594806 FAM47DPA6NHR8 397 aa26.07■■□□□ 1.76
TRIM28-204ENST00000594806 C16orf96A6NNT2 1141 aa26.07■■□□□ 1.76
TRIM28-204ENST00000594806 AP1G1O43747 822 aa26.07■■□□□ 1.76
TRIM28-204ENST00000594806 MAP3K6O95382 1288 aa26.07■■□□□ 1.76
TRIM28-204ENST00000594806 FTCDO95954 541 aa26.07■■□□□ 1.76
TRIM28-204ENST00000594806 CCNB1P14635 433 aa26.07■■□□□ 1.76
TRIM28-204ENST00000594806 CR2P20023 1033 aa26.07■■□□□ 1.76
TRIM28-204ENST00000594806 SERPINA4P29622 427 aa26.07■■□□□ 1.76
TRIM28-204ENST00000594806 SCNN1BP51168 640 aa26.07■■□□□ 1.76
TRIM28-204ENST00000594806 DYNLT1P63172 113 aa26.07■■□□□ 1.76
TRIM28-204ENST00000594806 DUOXA1Q1HG43 343 aa26.07■■□□□ 1.76
TRIM28-204ENST00000594806 TRIM69Q86WT6 500 aa26.07■■□□□ 1.76
TRIM28-204ENST00000594806 ALG3Q92685 438 aa26.07■■□□□ 1.76
TRIM28-204ENST00000594806 P3H4Q92791 437 aa26.07■■□□□ 1.76
TRIM28-204ENST00000594806 BIRC7Q96CA5 298 aa26.07■■□□□ 1.76
TRIM28-204ENST00000594806 OSBPL8Q9BZF1 889 aa26.07■■□□□ 1.76
TRIM28-204ENST00000594806 SUV39H2Q9H5I1 410 aa26.07■■□□□ 1.76
TRIM28-204ENST00000594806 LZTFL1Q9NQ48 299 aa26.07■■□□□ 1.76
TRIM28-204ENST00000594806 DMDP11532 3685 aa26.07■■□□□ 1.76
TRIM28-204ENST00000594806 ANKRD36A6QL64 1941 aa26.06■■□□□ 1.76
TRIM28-204ENST00000594806 A0A1W2PQ67 120 aa26.06■■□□□ 1.76
TRIM28-204ENST00000594806 PRR5-ARHGAP8B1AHC4 643 aa26.06■■□□□ 1.76
TRIM28-204ENST00000594806 RNF103O00237 685 aa26.06■■□□□ 1.76
TRIM28-204ENST00000594806 PLK4O00444 970 aa26.06■■□□□ 1.76
TRIM28-204ENST00000594806 INSIG1O15503 277 aa26.06■■□□□ 1.76
TRIM28-204ENST00000594806 NEBLO76041 1014 aa26.06■■□□□ 1.76
TRIM28-204ENST00000594806 FSBPO95073 299 aa26.06■■□□□ 1.76
TRIM28-204ENST00000594806 TGM1P22735 817 aa26.06■■□□□ 1.76
TRIM28-204ENST00000594806 CD27P26842 260 aa26.06■■□□□ 1.76
TRIM28-204ENST00000594806 RGRP47804 291 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms