RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 PAGE4O60829 102 aa6.67□□□□□ -1.34
LEMD3-206ENST00000545026 RBMXL2O75526 392 aaKnown RBP6.67□□□□□ -1.34
LEMD3-206ENST00000545026 TOP3BO95985 862 aaKnown RBP6.67□□□□□ -1.34
LEMD3-206ENST00000545026 TTKP33981 857 aa6.67□□□□□ -1.34
LEMD3-206ENST00000545026 HADHAP40939 763 aa6.67□□□□□ -1.34
LEMD3-206ENST00000545026 ARHGAP25P42331 645 aa6.67□□□□□ -1.34
LEMD3-206ENST00000545026 GNAQP50148 359 aa6.67□□□□□ -1.34
LEMD3-206ENST00000545026 SMTNL2Q2TAL5 461 aa6.67□□□□□ -1.34
LEMD3-206ENST00000545026 KIAA1614Q5VZ46 1190 aa6.67□□□□□ -1.34
LEMD3-206ENST00000545026 NCEH1Q6PIU2 408 aa6.67□□□□□ -1.34
LEMD3-206ENST00000545026 SERPINA11Q86U17 422 aa6.67□□□□□ -1.34
LEMD3-206ENST00000545026 TMC8Q8IU68 726 aa6.67□□□□□ -1.34
LEMD3-206ENST00000545026 ZDHHC23Q8IYP9 409 aa6.67□□□□□ -1.34
LEMD3-206ENST00000545026 FAM185AQ8N0U4 392 aa6.67□□□□□ -1.34
LEMD3-206ENST00000545026 TTC39CQ8N584 583 aa6.67□□□□□ -1.34
LEMD3-206ENST00000545026 DPP10Q8N608 796 aa6.67□□□□□ -1.34
LEMD3-206ENST00000545026 RASSF8Q8NHQ8 419 aa6.67□□□□□ -1.34
LEMD3-206ENST00000545026 NSUN4Q96CB9 384 aaKnown RBP6.67□□□□□ -1.34
LEMD3-206ENST00000545026 WDR83Q9BRX9 315 aaKnown RBP6.67□□□□□ -1.34
LEMD3-206ENST00000545026 H2AFJQ9BTM1 129 aa6.67□□□□□ -1.34
LEMD3-206ENST00000545026 STRA6Q9BX79 667 aa6.67□□□□□ -1.34
LEMD3-206ENST00000545026 CCDC68Q9H2F9 335 aa6.67□□□□□ -1.34
LEMD3-206ENST00000545026 THSD1Q9NS62 852 aa6.67□□□□□ -1.34
LEMD3-206ENST00000545026 CLIC5Q9NZA1 410 aa6.67□□□□□ -1.34
LEMD3-206ENST00000545026 EHD2Q9NZN4 543 aa6.67□□□□□ -1.34
LEMD3-206ENST00000545026 A0A1W2PQF6 199 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 LRRC53A6NM62 1247 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 AGAP14A8MT82 685 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 SNAP23O00161 211 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 AHCYL1O43865 530 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 EIF2S1P05198 315 aaKnown RBP6.66□□□□□ -1.34
LEMD3-206ENST00000545026 HSP90AA1P07900 732 aaKnown RBP6.66□□□□□ -1.34
LEMD3-206ENST00000545026 IRF1P10914 325 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 CTPS1P17812 591 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 TNFSF8P32971 234 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 GABRB2P47870 512 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 ZNF91Q05481 1191 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 VEPH1Q14D04 833 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 HIST2H2ACQ16777 129 aaPredicted RBP6.66□□□□□ -1.34
LEMD3-206ENST00000545026 ZNF793Q6ZN11 406 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 TBC1D26Q86UD7 250 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 DHX40Q8IX18 779 aaKnown RBP6.66□□□□□ -1.34
LEMD3-206ENST00000545026 KIAA2013Q8IYS2 634 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 WDTC1Q8N5D0 677 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 FRMD1Q8N878 549 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 LRRC57Q8N9N7 239 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 KDM1BQ8NB78 822 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 NEK9Q8TD19 979 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 PSPC1Q8WXF1 523 aaKnown RBP6.66□□□□□ -1.34
LEMD3-206ENST00000545026 ARHGEF2Q92974 986 aaKnown RBP6.66□□□□□ -1.34
LEMD3-206ENST00000545026 FAM149B1Q96BN6 582 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 SORCS2Q96PQ0 1159 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 NUDT16L1Q9BRJ7 211 aaKnown RBP6.66□□□□□ -1.34
LEMD3-206ENST00000545026 PLEKHA4Q9H4M7 779 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 SYNCQ9H7C4 482 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 POLR1BQ9H9Y6 1135 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 TMEM184CQ9NVA4 438 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 SEL1LQ9UBV2 794 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 ZNF70Q9UC06 446 aaPredicted RBP6.66□□□□□ -1.34
LEMD3-206ENST00000545026 RAP2CQ9Y3L5 183 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 ADAM18Q9Y3Q7 739 aa6.66□□□□□ -1.34
LEMD3-206ENST00000545026 SETD1BQ9UPS6 1966 aaKnown RBP6.66□□□□□ -1.34
LEMD3-206ENST00000545026 TTC36A6NLP5 189 aa6.65□□□□□ -1.34
LEMD3-206ENST00000545026 NPIPB11E5RHQ5 1161 aa6.65□□□□□ -1.34
LEMD3-206ENST00000545026 PTGES3LE9PB15 166 aa6.65□□□□□ -1.34
LEMD3-206ENST00000545026 HSPB6O14558 160 aa6.65□□□□□ -1.34
LEMD3-206ENST00000545026 TLX3O43711 291 aaPredicted RBP6.65□□□□□ -1.34
LEMD3-206ENST00000545026 TLR2O60603 784 aa6.65□□□□□ -1.34
LEMD3-206ENST00000545026 CNOT3O75175 753 aaKnown RBP6.65□□□□□ -1.34
LEMD3-206ENST00000545026 TFP02787 698 aa6.65□□□□□ -1.34
LEMD3-206ENST00000545026 RARGP13631 454 aa6.65□□□□□ -1.34
LEMD3-206ENST00000545026 CDH2P19022 906 aaPredicted RBP6.65□□□□□ -1.34
LEMD3-206ENST00000545026 HOXD9P28356 352 aaPredicted RBP6.65□□□□□ -1.34
LEMD3-206ENST00000545026 EPHB2P29323 1055 aa6.65□□□□□ -1.34
LEMD3-206ENST00000545026 PTGER1P34995 402 aa6.65□□□□□ -1.34
LEMD3-206ENST00000545026 ID2Q02363 134 aa6.65□□□□□ -1.34
LEMD3-206ENST00000545026 CREB5Q02930 508 aa6.65□□□□□ -1.34
LEMD3-206ENST00000545026 CEBPZQ03701 1054 aaKnown RBP6.65□□□□□ -1.34
LEMD3-206ENST00000545026 CUL4AQ13619 759 aa6.65□□□□□ -1.34
LEMD3-206ENST00000545026 ALG11Q2TAA5 492 aa6.65□□□□□ -1.34
LEMD3-206ENST00000545026 DPCR1Q3MIW9 517 aa6.65□□□□□ -1.34
LEMD3-206ENST00000545026 SUPT20HL1Q3ZLR7 823 aa6.65□□□□□ -1.34
LEMD3-206ENST00000545026 C6orf10Q5SRN2 563 aa6.65□□□□□ -1.34
LEMD3-206ENST00000545026 SLC18B1Q6NT16 456 aa6.65□□□□□ -1.34
LEMD3-206ENST00000545026 HMBOX1Q6NT76 420 aa6.65□□□□□ -1.34
LEMD3-206ENST00000545026 RPAP2Q8IXW5 612 aaPredicted RBP6.65□□□□□ -1.34
LEMD3-206ENST00000545026 SLC44A5Q8NCS7 719 aa6.65□□□□□ -1.34
LEMD3-206ENST00000545026 MCPH1Q8NEM0 835 aa6.65□□□□□ -1.34
LEMD3-206ENST00000545026 SMARCE1Q969G3 411 aa6.65□□□□□ -1.34
LEMD3-206ENST00000545026 MSI2Q96DH6 328 aaKnown RBP6.65□□□□□ -1.34
LEMD3-206ENST00000545026 PABPC5Q96DU9 382 aaKnown RBP6.65□□□□□ -1.34
LEMD3-206ENST00000545026 WDFY2Q96P53 400 aa6.65□□□□□ -1.34
LEMD3-206ENST00000545026 NUF2Q9BZD4 464 aa6.65□□□□□ -1.34
LEMD3-206ENST00000545026 SPATS2LQ9NUQ6 558 aaKnown RBP6.65□□□□□ -1.34
LEMD3-206ENST00000545026 CARD8Q9Y2G2 431 aa6.65□□□□□ -1.34
LEMD3-206ENST00000545026 SLC4A4Q9Y6R1 1079 aa6.65□□□□□ -1.34
LEMD3-206ENST00000545026 KAT6BQ8WYB5 2073 aa6.64□□□□□ -1.35
LEMD3-206ENST00000545026 A0A096LPK6 155 aa6.64□□□□□ -1.35
LEMD3-206ENST00000545026 BCAT2O15382 392 aaPredicted RBP6.64□□□□□ -1.35
LEMD3-206ENST00000545026 TIMM44O43615 452 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms