RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 CHRNB4P30926 498 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 SKIV2L2P42285 1042 aaKnown RBP0.84□□□□□ -2.27
COPB1-212ENST00000534771 PCP4P48539 62 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 CLK1P49759 484 aaKnown RBP0.84□□□□□ -2.27
COPB1-212ENST00000534771 SLC8A3P57103 927 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 PITX1P78337 314 aaPredicted RBP0.84□□□□□ -2.27
COPB1-212ENST00000534771 RNASELQ05823 741 aaKnown RBP0.84□□□□□ -2.27
COPB1-212ENST00000534771 SEMA5AQ13591 1074 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 ALKBH1Q13686 389 aaKnown RBP0.84□□□□□ -2.27
COPB1-212ENST00000534771 OASLQ15646 514 aaKnown RBP0.84□□□□□ -2.27
COPB1-212ENST00000534771 PDSS1Q5T2R2 415 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 SLC35E4Q6ICL7 350 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 CXorf57Q6NSI4 855 aaKnown RBP0.84□□□□□ -2.27
COPB1-212ENST00000534771 RINT1Q6NUQ1 792 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 AADACL2Q6P093 401 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 CCDC129Q6ZRS4 1044 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 CHST15Q7LFX5 561 aaPredicted RBP0.84□□□□□ -2.27
COPB1-212ENST00000534771 NOTCH2NLQ7Z3S9 236 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 TRIM74Q86UV6 250 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 TRIM73Q86UV7 250 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 VPS52Q8N1B4 723 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 GALNT15Q8N3T1 639 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 GLIS1Q8NBF1 620 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 SLC24A4Q8NFF2 622 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 FGFBP3Q8TAT2 258 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 CREB3L4Q8TEY5 395 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 TBC1D22AQ8WUA7 517 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 ZNF653Q96CK0 615 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 ALG14Q96F25 216 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 CDCA5Q96FF9 252 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 TMEM19Q96HH6 336 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 ASCL2Q99929 193 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 HERPUD2Q9BSE4 406 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 FSD1Q9BTV5 496 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 CDH19Q9H159 772 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 PDZD7Q9H5P4 517 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 PDE11AQ9HCR9 933 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 TMEM160Q9NX00 188 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 OR6C3Q9NZP0 311 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 ZIM2Q9NZV7 527 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 MYO1AQ9UBC5 1043 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 SLCO3A1Q9UIG8 710 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 PCDHA10Q9Y5I2 948 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 COL4A3BPQ9Y5P4 624 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 ATXN2Q99700 1313 aaKnown RBP0.84□□□□□ -2.28
COPB1-212ENST00000534771 NDUFAF8A1L188 74 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 TARSL2A2RTX5 802 aaKnown RBP0.83□□□□□ -2.28
COPB1-212ENST00000534771 FAM157AC9JC47 383 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 BLOC1S5-TXNDC5H3BN57 136 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 H7C423 109 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 PSMD14O00487 310 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 SH2B2O14492 632 aaPredicted RBP0.83□□□□□ -2.28
COPB1-212ENST00000534771 DVL1O14640 695 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 HSPA12AO43301 675 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 ARHGEF9O43307 516 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 CCNT1O60563 726 aaKnown RBP0.83□□□□□ -2.28
COPB1-212ENST00000534771 CAVIN2O95810 425 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 GLP2RO95838 553 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 DDAH2O95865 285 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 TFRCP02786 760 aaKnown RBP0.83□□□□□ -2.28
COPB1-212ENST00000534771 INHBAP08476 426 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 DPEP1P16444 411 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 ZNF26P17031 533 aaPredicted RBP0.83□□□□□ -2.28
COPB1-212ENST00000534771 YWHAQP27348 245 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 DCTDP32321 178 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 RCAN1P53805 252 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 TERF1P54274 439 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 DVL1P1P54792 670 aaPredicted RBP0.83□□□□□ -2.28
COPB1-212ENST00000534771 FAM3BP58499 235 aaPredicted RBP0.83□□□□□ -2.28
COPB1-212ENST00000534771 BRWD1-AS2P59051 145 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 GNB1P62873 340 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 CDK18Q07002 472 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 FAM27E3Q08E93 113 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 CAPSQ13938 189 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 LPIN1Q14693 890 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 UGP2Q16851 508 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 ARL13BQ3SXY8 428 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 CCNYL2Q5T2Q4 361 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 SFMBT2Q5VUG0 894 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 METTL7BQ6UX53 244 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 SHFQ7M4L6 423 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 RNF144BQ7Z419 303 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 ZC3HC1Q86WB0 502 aaKnown RBP0.83□□□□□ -2.28
COPB1-212ENST00000534771 MB21D2Q8IYB1 491 aaPredicted RBP0.83□□□□□ -2.28
COPB1-212ENST00000534771 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP0.83□□□□□ -2.28
COPB1-212ENST00000534771 NRSN1Q8IZ57 195 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 TXLNBQ8N3L3 684 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 CCDC33Q8N5R6 958 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 RNF152Q8N8N0 203 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 AMER3Q8N944 861 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 MCPH1Q8NEM0 835 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 KLHDC9Q8NEP7 349 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 ZCRB1Q8TBF4 217 aaKnown RBP0.83□□□□□ -2.28
COPB1-212ENST00000534771 WDR20Q8TBZ3 569 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 TMEM190Q8WZ59 177 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 KCNJ9Q92806 393 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 ATOH1Q92858 354 aaPredicted RBP0.83□□□□□ -2.28
COPB1-212ENST00000534771 POM121L2Q96KW2 1035 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 ART5Q96L15 291 aa0.83□□□□□ -2.28
COPB1-212ENST00000534771 LRR1Q96L50 414 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms