RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 RUNX1T1Q06455 604 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 RAPGEF1Q13905 1077 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 RRS1Q15050 365 aaKnown RBP4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 PPP1R7Q15435 360 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 MAPRE2Q15555 327 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 PTCHD3Q3KNS1 767 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 CEP78Q5JTW2 689 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 NDUFAF5Q5TEU4 345 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 SULT6B1Q6IMI4 303 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 C8orf74Q6P047 294 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 FIP1L1Q6UN15 594 aaKnown RBP4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 PPP1R21Q6ZMI0 780 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 MCM10Q7L590 875 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 DGLUCYQ7Z3D6 616 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 CCAR2Q8N163 923 aaKnown RBP4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 GALNT4Q8N4A0 578 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 TMCO5AQ8N6Q1 288 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 TERB1Q8NA31 727 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 BBOF1Q8ND07 529 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 STKLD1Q8NE28 680 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 ABHD5Q8WTS1 349 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 NSMCE1Q8WV22 266 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 WDR60Q8WVS4 1066 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 BRI3BPQ8WY22 251 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 NRBF2Q96F24 287 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 CLMNQ96JQ2 1002 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 FAM227BQ96M60 508 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 CCDC42Q96M95 316 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 PSKH2Q96QS6 385 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 SNX18Q96RF0 628 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 MPHOSPH8Q99549 860 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 NDNQ99608 321 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 BICC1Q9H694 974 aaKnown RBP4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 ZBTB40Q9NUA8 1239 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 RMND1Q9NWS8 449 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 MGAT4CQ9UBM8 478 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 TBK1Q9UHD2 729 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 SLC45A1Q9Y2W3 748 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 RABGAP1Q9Y3P9 1069 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 ATP6V1DQ9Y5K8 247 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 SETD1AO15047 1707 aaKnown RBP4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 JCADQ9P266 1359 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 UBN2Q6ZU65 1347 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 CLRN2A0PK11 232 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 MACROD2A1Z1Q3 448 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 LINC01548A6NM66 108 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 ERVV-2B6SEH9 535 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 GOLGA8KD6RF30 607 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 H3BQF6 201 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 GOLGA8TH3BQL2 631 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 AP4M1O00189 453 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 APOL1O14791 398 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 EIF3HO15372 352 aaKnown RBP eCLIP4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 NMT2O60551 498 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 ZC3H11AO75152 810 aaKnown RBP eCLIP4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 GCATO75600 419 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 RNASEH2AO75792 299 aaKnown RBP4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 APOEP02649 317 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 A1BGP04217 495 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 ZFYP08048 801 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 IFIT2P09913 472 aaKnown RBP4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 GOLGA8HP0CJ92 632 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 CDK4P11802 303 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 IL1R1P14778 569 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 ATF7P17544 494 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 EIF2S2P20042 333 aaKnown RBP4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 PCSK6P29122 969 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 CTGFP29279 349 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 CETN2P41208 172 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 PIK3CBP42338 1070 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 PTH2RP49190 550 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 MXI1P50539 228 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 DGKQP52824 942 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 COPAP53621 1224 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 UBASH3AP57075 661 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 C21orf58P58505 322 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 DSTNP60981 165 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 E2F1Q01094 437 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 ZNF543Q08ER8 600 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 FAM133BQ5BKY9 247 aaKnown RBP4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 FCRL6Q6DN72 434 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 MRNIPQ6NTE8 343 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 LVRNQ6Q4G3 990 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 VSTM1Q6UX27 236 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 NAPRTQ6XQN6 538 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 DSTYKQ6XUX3 929 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 ZNF788Q6ZQV5 615 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 C3orf62Q6ZUJ4 267 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 TAOK1Q7L7X3 1001 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 ERICH1Q86X53 443 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 CCDC13Q8IYE1 715 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 C16orf71Q8IYS4 520 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 BCAS4Q8TDM0 211 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 ADAMTS18Q8TE60 1221 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 CCDC17Q96LX7 622 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 HNRNPABQ99729 332 aaKnown RBP4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 CINPQ9BW66 212 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 FAM129AQ9BZQ8 928 aa4.83□□□□□ -1.64
HMGB3P13-201ENST00000511263 ABCG4Q9H172 646 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms