RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 NRG4Q8WWG1 115 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 IGSF8Q969P0 613 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 MRPL38Q96DV4 380 aaKnown RBP8.8□□□□□ -1
LIMCH1-209ENST00000509277 MTBPQ96DY7 904 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 MYEOVQ96EZ4 313 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 KXD1Q9BQD3 176 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 APOL2Q9BQE5 337 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 OXCT2Q9BYC2 517 aaPredicted RBP8.8□□□□□ -1
LIMCH1-209ENST00000509277 NSUN3Q9H649 340 aaKnown RBP8.8□□□□□ -1
LIMCH1-209ENST00000509277 ARHGEF4Q9NR80 690 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 OLA1Q9NTK5 396 aaKnown RBP8.8□□□□□ -1
LIMCH1-209ENST00000509277 KLHL8Q9P2G9 620 aaPredicted RBP8.8□□□□□ -1
LIMCH1-209ENST00000509277 PDP2Q9P2J9 529 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 ACTL7AQ9Y615 435 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 ZFP37Q9Y6Q3 630 aaPredicted RBP8.8□□□□□ -1
LIMCH1-209ENST00000509277 CARNS1A5YM72 827 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 BANF1O75531 89 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 STC2O76061 302 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 KLKB1P03952 638 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 ACADSP16219 412 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 TCN1P20061 433 aaPredicted RBP8.8□□□□□ -1
LIMCH1-209ENST00000509277 HYAL1Q12794 435 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 TCHHL1Q5QJ38 904 aaPredicted RBP8.8□□□□□ -1
LIMCH1-209ENST00000509277 ATAT1Q5SQI0 421 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 HEATR6Q6AI08 1181 aaKnown RBP8.8□□□□□ -1
LIMCH1-209ENST00000509277 OR52E8Q6IFG1 317 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 ARHGAP36Q6ZRI8 547 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 PID1Q7Z2X4 250 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 POLNQ7Z5Q5 900 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 WDR75Q8IWA0 830 aaKnown RBP8.8□□□□□ -1
LIMCH1-209ENST00000509277 KBTBD2Q8IY47 623 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 TRIML2Q8N7C3 387 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 GLIS1Q8NBF1 620 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 VN1R2Q8NFZ6 395 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 TLCD1Q96CP7 247 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 TMA16Q96EY4 203 aaKnown RBP8.8□□□□□ -1
LIMCH1-209ENST00000509277 SAMD11Q96NU1 681 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 ANKRD27Q96NW4 1050 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 PRKD2Q9BZL6 878 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 TRABDQ9H4I3 376 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 IKBKGQ9Y6K9 419 aa8.8□□□□□ -1
LIMCH1-209ENST00000509277 NCOR1O75376 2440 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 F11P03951 625 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 GSTA2P09210 222 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 TACR2P21452 398 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 FSHRP23945 695 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 MAN1A1P33908 653 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 SOX11P35716 441 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 CXCR3P49682 368 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 MAXP61244 160 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 PEX6Q13608 980 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 ADGRE1Q14246 886 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 TRIP4Q15650 581 aaPredicted RBP8.79□□□□□ -1
LIMCH1-209ENST00000509277 PCSK7Q16549 785 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 MS4A13Q5J8X5 152 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 UNC45BQ8IWX7 931 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 YAF2Q8IY57 180 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 CMTM8Q8IZV2 173 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 TDRD5Q8NAT2 981 aaKnown RBP8.79□□□□□ -1
LIMCH1-209ENST00000509277 OR7D4Q8NG98 312 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 GBF1Q92538 1859 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 MRPL1Q9BYD6 325 aaKnown RBP8.79□□□□□ -1
LIMCH1-209ENST00000509277 TTYH1Q9H313 450 aaPredicted RBP8.79□□□□□ -1
LIMCH1-209ENST00000509277 SP110Q9HB58 689 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 XAB2Q9HCS7 855 aaKnown RBP8.79□□□□□ -1
LIMCH1-209ENST00000509277 MYO10Q9HD67 2058 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 LRRC42Q9Y546 428 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 FAM47DPA6NHR8 397 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 TRIM24O15164 1050 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 ZMPSTE24O75844 475 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 JCHAINP01591 159 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 SLC2A3P11169 496 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 RPA3P35244 121 aaPredicted RBP8.79□□□□□ -1
LIMCH1-209ENST00000509277 COILP38432 576 aaPredicted RBP8.79□□□□□ -1
LIMCH1-209ENST00000509277 MAGEA8P43361 318 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 SGSHP51688 502 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 ITGA8P53708 1063 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 PRAMEP78395 509 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 TNK2Q07912 1038 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 PPIDQ08752 370 aaKnown RBP8.79□□□□□ -1
LIMCH1-209ENST00000509277 CYLC2Q14093 348 aaPredicted RBP8.79□□□□□ -1
LIMCH1-209ENST00000509277 PDK2Q15119 407 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 MARK2Q7KZI7 788 aaKnown RBP8.79□□□□□ -1
LIMCH1-209ENST00000509277 PLD5Q8N7P1 536 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 NIPA2Q8N8Q9 360 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 OR6K2Q8NGY2 324 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 RPL10LQ96L21 214 aaKnown RBP8.79□□□□□ -1
LIMCH1-209ENST00000509277 CADM1Q9BY67 442 aaKnown RBP8.79□□□□□ -1
LIMCH1-209ENST00000509277 DCLK3Q9C098 648 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 CIPCQ9C0C6 399 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 IL21Q9HBE4 155 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 TDP1Q9NUW8 608 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 SELENONQ9NZV5 590 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 DPP7Q9UHL4 492 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 AGO1Q9UL18 857 aaKnown RBP8.79□□□□□ -1
LIMCH1-209ENST00000509277 TLR6Q9Y2C9 796 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 LEFTY2O00292 366 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 ACSL4O60488 711 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 CCDC22O60826 627 aa8.79□□□□□ -1
LIMCH1-209ENST00000509277 PHF2O75151 1096 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms