RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 ADCK5Q3MIX3 580 aa3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 TYW3Q6IPR3 259 aaKnown RBP3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 RETSATQ6NUM9 610 aa3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 Q6ZTC4 211 aa3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 H1FNTQ75WM6 255 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 PATL1Q86TB9 770 aaKnown RBP3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 CHD1LQ86WJ1 897 aa3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 MCPH1Q8NEM0 835 aa3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 CCT6BQ92526 530 aa3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 HSPH1Q92598 858 aa3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 STAMQ92783 540 aa3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 SLC25A33Q9BSK2 321 aa3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 CNPY2Q9Y2B0 182 aa3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 PCDHGB3Q9Y5G1 929 aa3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 ADGRF5Q8IZF2 1346 aa3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 PLSCR5A0PG75 271 aa3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 VWA3AA6NCI4 1184 aa3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 FAM90A7PA6NKC0 464 aa3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 FAM90A22PA8MWA6 464 aa3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 FAM90A12PA8MX19 464 aa3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 FAM90A23PA8MXZ1 464 aa3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 DDNO94850 711 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 WEE2P0C1S8 567 aa3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 TNNT1P13805 278 aa3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 KRTAP10-6P60371 365 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 ERVFC1-1P60608 527 aa3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 DDR1Q08345 913 aa3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 OS9Q13438 667 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 BIRC2Q13490 618 aa3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 FAM76BQ5HYJ3 339 aa3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 MOB3CQ70IA8 216 aa3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 LURAP1LQ8IV03 231 aa3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 MB21D2Q8IYB1 491 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 NKAPQ8N5F7 415 aaKnown RBP3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 LILRB1Q8NHL6 650 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 ARRDC2Q8TBH0 407 aa3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 GDPD5Q8WTR4 605 aa3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 RTP4Q96DX8 246 aa3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 C1QTNF4Q9BXJ3 329 aa3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 ZNF556Q9HAH1 456 aa3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 RASSF1Q9NS23 344 aa3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 GDAQ9Y2T3 454 aa3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 MORC2Q9Y6X9 1032 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P29-201ENST00000505659 A0A1B0GVM2 712 aa3.54□□□□□ -1.84
HMGB1P29-201ENST00000505659 PER2O15055 1255 aa3.54□□□□□ -1.84
HMGB1P29-201ENST00000505659 ANP32CO43423 234 aa3.54□□□□□ -1.84
HMGB1P29-201ENST00000505659 CEP104O60308 925 aa3.54□□□□□ -1.84
HMGB1P29-201ENST00000505659 PIP5K1CO60331 668 aa3.54□□□□□ -1.84
HMGB1P29-201ENST00000505659 PEX14O75381 377 aa3.54□□□□□ -1.84
HMGB1P29-201ENST00000505659 CNPP09543 421 aaKnown RBP3.54□□□□□ -1.84
HMGB1P29-201ENST00000505659 EDN2P20800 178 aa3.54□□□□□ -1.84
HMGB1P29-201ENST00000505659 CENPAP49450 140 aa3.54□□□□□ -1.84
HMGB1P29-201ENST00000505659 TUBA1BP68363 451 aa3.54□□□□□ -1.84
HMGB1P29-201ENST00000505659 ADORA2A-AS1P86434 159 aa3.54□□□□□ -1.84
HMGB1P29-201ENST00000505659 DHX34Q14147 1143 aaKnown RBP3.54□□□□□ -1.84
HMGB1P29-201ENST00000505659 SETMARQ53H47 684 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P29-201ENST00000505659 ANKRD45Q5TZF3 282 aa3.54□□□□□ -1.84
HMGB1P29-201ENST00000505659 DENND6AQ8IWF6 608 aa3.54□□□□□ -1.84
HMGB1P29-201ENST00000505659 CCDC105Q8IYK2 499 aa3.54□□□□□ -1.84
HMGB1P29-201ENST00000505659 PGBD5Q8N414 524 aa3.54□□□□□ -1.84
HMGB1P29-201ENST00000505659 RAB40AQ8WXH6 277 aa3.54□□□□□ -1.84
HMGB1P29-201ENST00000505659 RNF183Q96D59 192 aa3.54□□□□□ -1.84
HMGB1P29-201ENST00000505659 TWNKQ96RR1 684 aa3.54□□□□□ -1.84
HMGB1P29-201ENST00000505659 EPHX3Q9H6B9 360 aa3.54□□□□□ -1.84
HMGB1P29-201ENST00000505659 GAREM1Q9H706 876 aa3.54□□□□□ -1.84
HMGB1P29-201ENST00000505659 ENTPD7Q9NQZ7 604 aa3.54□□□□□ -1.84
HMGB1P29-201ENST00000505659 COMMD10Q9Y6G5 202 aa3.54□□□□□ -1.84
HMGB1P29-201ENST00000505659 PABPN1LA6NDY0 278 aaKnown RBP3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 CBY3A6NI87 242 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 SH2D7A6NKC9 451 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 IRAK2O43187 625 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 KIF1CO43896 1103 aaKnown RBP3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 ATP2C2O75185 946 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 CH25HO95992 272 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 CHRM4P08173 479 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 TFPIP10646 304 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 SSTR2P30874 369 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 PIGAP37287 484 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 RPL3P39023 403 aaKnown RBP3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 MYBPHQ13203 477 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 TDGQ13569 410 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 SLC12A1Q13621 1099 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 SLC39A14Q15043 492 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 GRAMD1BQ3KR37 738 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 NCAPH2Q6IBW4 605 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 CES5AQ6NT32 575 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 SPSB3Q6PJ21 355 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 C17orf99Q6UX52 265 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 CUZD1Q86UP6 607 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 TCP11L2Q8N4U5 519 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 RFWD2Q8NHY2 731 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 WFIKKN2Q8TEU8 576 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 CNOT9Q92600 299 aaKnown RBP3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 TTYH1Q9H313 450 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 RETREG1Q9H6L5 497 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 DDX31Q9H8H2 851 aaKnown RBP3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 SPATS2LQ9NUQ6 558 aaKnown RBP3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 OR6C3Q9NZP0 311 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 IFT80Q9P2H3 777 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms