RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 TMEM74BQ9NUR3 256 aa13.77□□□□□ -0.21
FDPS-219ENST00000495308 SAE1Q9UBE0 346 aaPredicted RBP13.77□□□□□ -0.21
FDPS-219ENST00000495308 SEPT3Q9UH03 358 aa13.77□□□□□ -0.21
FDPS-219ENST00000495308 PPP2R2CQ9Y2T4 447 aa13.77□□□□□ -0.21
FDPS-219ENST00000495308 TMEM131Q92545 1883 aa13.76□□□□□ -0.21
FDPS-219ENST00000495308 BCLAF3A2AJT9 711 aaKnown RBP13.76□□□□□ -0.21
FDPS-219ENST00000495308 DDX3YO15523 660 aaKnown RBP13.76□□□□□ -0.21
FDPS-219ENST00000495308 PLRG1O43660 514 aaKnown RBP13.76□□□□□ -0.21
FDPS-219ENST00000495308 ZFXP17010 805 aaPredicted RBP13.76□□□□□ -0.21
FDPS-219ENST00000495308 MX2P20592 715 aa13.76□□□□□ -0.21
FDPS-219ENST00000495308 MMP13P45452 471 aa13.76□□□□□ -0.21
FDPS-219ENST00000495308 TAS2R38P59533 333 aa13.76□□□□□ -0.21
FDPS-219ENST00000495308 MAXP61244 160 aa13.76□□□□□ -0.21
FDPS-219ENST00000495308 PPP2CBP62714 309 aa13.76□□□□□ -0.21
FDPS-219ENST00000495308 PPP2CAP67775 309 aa13.76□□□□□ -0.21
FDPS-219ENST00000495308 RAD51Q06609 339 aa13.76□□□□□ -0.21
FDPS-219ENST00000495308 TFDP2Q14188 446 aa13.76□□□□□ -0.21
FDPS-219ENST00000495308 MARC1Q5VT66 337 aa13.76□□□□□ -0.21
FDPS-219ENST00000495308 SRLQ86TD4 932 aa13.76□□□□□ -0.21
FDPS-219ENST00000495308 LRRC49Q8IUZ0 686 aa13.76□□□□□ -0.21
FDPS-219ENST00000495308 CADM4Q8NFZ8 388 aa13.76□□□□□ -0.21
FDPS-219ENST00000495308 OR2T34Q8NGX1 318 aa13.76□□□□□ -0.21
FDPS-219ENST00000495308 FOXJ1Q92949 421 aa13.76□□□□□ -0.21
FDPS-219ENST00000495308 HDAC11Q96DB2 347 aa13.76□□□□□ -0.21
FDPS-219ENST00000495308 NSMCE3Q96MG7 304 aa13.76□□□□□ -0.21
FDPS-219ENST00000495308 OLFM3Q96PB7 478 aa13.76□□□□□ -0.21
FDPS-219ENST00000495308 OSBPL1AQ9BXW6 950 aa13.76□□□□□ -0.21
FDPS-219ENST00000495308 HDAC8Q9BY41 377 aa13.76□□□□□ -0.21
FDPS-219ENST00000495308 NT5MQ9NPB1 228 aa13.76□□□□□ -0.21
FDPS-219ENST00000495308 PCDHGA5Q9Y5G8 931 aa13.76□□□□□ -0.21
FDPS-219ENST00000495308 TRPM6Q9BX84 2022 aa13.76□□□□□ -0.21
FDPS-219ENST00000495308 TBC1D3DA0A087WVF3 549 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 TBC1D3IA0A087WXS9 549 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 TBC1D3EA0A087X179 549 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 TBC1D3KA0A087X1G2 549 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 TBC1D3FA6NER0 549 aaPredicted RBP13.75□□□□□ -0.21
FDPS-219ENST00000495308 LRRC72A6NJI9 287 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 C16orf96A6NNT2 1141 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 METTL12A8MUP2 240 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 MIF4GDA9UHW6 222 aaKnown RBP13.75□□□□□ -0.21
FDPS-219ENST00000495308 PATE3B3GLJ2 98 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 TBC1D3LB9A6J9 549 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 MATN3O15232 486 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 SLC7A4O43246 635 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 IGHV4-34P06331 123 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 TBC1D3HP0C7X1 549 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 PYGMP11217 842 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 ADRB3P13945 408 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 CCNCP24863 283 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 SCNN1BP51168 640 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 RENBPP51606 427 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 NEK3P51956 506 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 PPIDQ08752 370 aaKnown RBP13.75□□□□□ -0.21
FDPS-219ENST00000495308 AP1B1Q10567 949 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 ZNF211Q13398 564 aaPredicted RBP13.75□□□□□ -0.21
FDPS-219ENST00000495308 SF3A2Q15428 464 aaKnown RBP13.75□□□□□ -0.21
FDPS-219ENST00000495308 PPP2R5EQ16537 467 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 ZNF805Q5CZA5 627 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 LRRC73Q5JTD7 316 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 PLA2G2CQ5R387 149 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 SYCP2LQ5T4T6 812 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 KIAA0895LQ68EN5 471 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 TBC1D3GQ6DHY5 549 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 TBC1D3CQ6IPX1 549 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 TCEAL6Q6IPX3 200 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 TIGD7Q6NT04 549 aaPredicted RBP13.75□□□□□ -0.21
FDPS-219ENST00000495308 CAMK1DQ8IU85 385 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 CCDC13Q8IYE1 715 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 TBC1D3Q8IZP1 549 aaPredicted RBP13.75□□□□□ -0.21
FDPS-219ENST00000495308 BBS5Q8N3I7 341 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 TEX26Q8N6G2 289 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 UBL4BQ8N7F7 174 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 TCEAL3Q969E4 200 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 BIRC7Q96CA5 298 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 HES6Q96HZ4 224 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 LRIG1Q96JA1 1093 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 TSGA13Q96PP4 275 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 CEP41Q9BYV8 373 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 MIR1-1HGQ9H1L0 117 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 SEMA4GQ9NTN9 838 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 EIF2B4Q9UI10 523 aaKnown RBP13.75□□□□□ -0.21
FDPS-219ENST00000495308 PILRBQ9UKJ0 227 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.75□□□□□ -0.21
FDPS-219ENST00000495308 TTLL3Q9Y4R7 772 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 SLCO1B1Q9Y6L6 691 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 BPTFQ12830 3046 aa13.75□□□□□ -0.21
FDPS-219ENST00000495308 PCDH15Q96QU1 1955 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 KCNK1O00180 336 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 PPP1R12AO14974 1030 aaPredicted RBP13.74□□□□□ -0.21
FDPS-219ENST00000495308 HLA-DQB2P05538 268 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 CCNB1P14635 433 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 TGM2P21980 687 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 TGM1P22735 817 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 ABL2P42684 1182 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 CSNK1DP48730 415 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 COPS2P61201 443 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 ITKQ08881 620 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 NSUN2Q08J23 767 aaKnown RBP eCLIP13.74□□□□□ -0.21
FDPS-219ENST00000495308 HNRNPDQ14103 355 aaKnown RBP13.74□□□□□ -0.21
FDPS-219ENST00000495308 PDK1Q15118 436 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms