RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 APBA2Q99767 749 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 EPB41L1Q9H4G0 881 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 MAN1C1Q9NR34 630 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 TMEM30AQ9NV96 361 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 SYBUQ9NX95 663 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 POU2F3Q9UKI9 436 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 MANSC4A6NHS7 340 aaPredicted RBP12.49□□□□□ -0.41
USP11-206ENST00000469080 XPO1O14980 1071 aaKnown RBP12.49□□□□□ -0.41
USP11-206ENST00000469080 ZMPSTE24O75844 475 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 MYL2P10916 166 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 NFKB1P19838 968 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 PMLP29590 882 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 MATKP42679 507 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 EIF2B5Q13144 721 aaKnown RBP12.49□□□□□ -0.41
USP11-206ENST00000469080 C10orf120Q5SQS8 335 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 KIAA0319Q5VV43 1072 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 UNC5AQ6ZN44 842 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 RIPOR1Q6ZS17 1223 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 THEM5Q8N1Q8 247 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 TTC9BQ8N6N2 239 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 CNBD2Q96M20 576 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 TSNARE1Q96NA8 513 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 THTPAQ9BU02 230 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 DUSP16Q9BY84 665 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 TRIM55Q9BYV6 548 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 POPDC2Q9HBU9 364 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 CYP4F12Q9HCS2 524 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 WDR6Q9NNW5 1121 aaKnown RBP12.49□□□□□ -0.41
USP11-206ENST00000469080 BFARQ9NZS9 450 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 FAM8A1Q9UBU6 413 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 A8MX80 341 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 CHRNA1P02708 482 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 TSPAN8P19075 237 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 TGM2P21980 687 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 CTGFP29279 349 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 TUBA4AP68366 448 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 PDK2Q15119 407 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 STILQ15468 1287 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 PHKG1Q16816 387 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 TIGD2Q4W5G0 525 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 SIGIRRQ6IA17 410 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 CDHR3Q6ZTQ4 885 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 CLNKQ7Z7G1 428 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 NAT8LQ8N9F0 302 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 ICA1LQ8NDH6 482 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 TRPV1Q8NER1 839 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 ACTRT2Q8TDY3 377 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 THAP11Q96EK4 314 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 AGAP2Q99490 1192 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 MARCH7Q9H992 704 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 PCDH12Q9NPG4 1184 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 RNF186Q9NXI6 227 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 DNAJB4Q9UDY4 337 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 GRID1Q9ULK0 1009 aa12.49□□□□□ -0.41
USP11-206ENST00000469080 DRG1Q9Y295 367 aaKnown RBP12.49□□□□□ -0.41
USP11-206ENST00000469080 CDH23Q9H251 3354 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 CFLARO15519 480 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 ZBTB24O43167 697 aaPredicted RBP12.48□□□□□ -0.41
USP11-206ENST00000469080 SNRPAP09012 282 aaKnown RBP12.48□□□□□ -0.41
USP11-206ENST00000469080 POLR2EP19388 210 aaKnown RBP12.48□□□□□ -0.41
USP11-206ENST00000469080 CHRNA4P43681 627 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 PEX6Q13608 980 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 ZNF460Q14592 562 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 AGAP9Q5VTM2 703 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 AGMOQ6ZNB7 445 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 RASAL3Q86YV0 1011 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 CLVS1Q8IUQ0 354 aaPredicted RBP12.48□□□□□ -0.41
USP11-206ENST00000469080 Q8N9G6 341 aaPredicted RBP12.48□□□□□ -0.41
USP11-206ENST00000469080 SMOQ99835 787 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 C12orf4Q9NQ89 552 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 CHRAC1Q9NRG0 131 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 TMLHEQ9NVH6 421 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 CNTN6Q9UQ52 1028 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 C3orf70A6NLC5 250 aaPredicted RBP12.48□□□□□ -0.41
USP11-206ENST00000469080 MEI4A8MW99 385 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 B2RBV5 119 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 AMHP03971 560 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 PCSK1P29120 753 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 IST1P53990 364 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 FOLH1Q04609 750 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 CTBP1Q13363 440 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 ANKRD20A4Q4UJ75 823 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 SLC45A4Q5BKX6 768 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 OTOAQ7RTW8 1153 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 UBR7Q8N806 425 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 SLC26A7Q8TE54 656 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 GTF3C2Q8WUA4 911 aaPredicted RBP12.48□□□□□ -0.41
USP11-206ENST00000469080 EME1Q96AY2 570 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 OMDQ99983 421 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 CCDC177Q9NQR7 707 aaPredicted RBP12.48□□□□□ -0.41
USP11-206ENST00000469080 STARD7Q9NQZ5 370 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 TAS2R1Q9NYW7 299 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 RSL24D1Q9UHA3 163 aaKnown RBP12.48□□□□□ -0.41
USP11-206ENST00000469080 GNEQ9Y223 722 aaKnown RBP12.48□□□□□ -0.41
USP11-206ENST00000469080 PSAT1Q9Y617 370 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 CNTRLQ7Z7A1 2325 aa12.48□□□□□ -0.41
USP11-206ENST00000469080 ZNF646O15015 1829 aaPredicted RBP12.48□□□□□ -0.41
USP11-206ENST00000469080 PSMD11O00231 422 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 GPR182O15218 404 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 PNPLA4P41247 253 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms