RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 CELF6Q96J87 481 aaKnown RBP19.2■□□□□ 0.66
COL5A1-203ENST00000460264 PDFQ9HBH1 243 aa19.2■□□□□ 0.66
COL5A1-203ENST00000460264 GOLGA8CPA6NN73 597 aa19.19■□□□□ 0.66
COL5A1-203ENST00000460264 SPINT1O43278 529 aa19.19■□□□□ 0.66
COL5A1-203ENST00000460264 THEGLP0DJG4 465 aa19.19■□□□□ 0.66
COL5A1-203ENST00000460264 CLDN2P57739 230 aa19.19■□□□□ 0.66
COL5A1-203ENST00000460264 FGL2Q14314 439 aa19.19■□□□□ 0.66
COL5A1-203ENST00000460264 PPP6R3Q5H9R7 873 aaPredicted RBP19.19■□□□□ 0.66
COL5A1-203ENST00000460264 KANSL1Q7Z3B3 1105 aa19.19■□□□□ 0.66
COL5A1-203ENST00000460264 VPS36Q86VN1 386 aa19.19■□□□□ 0.66
COL5A1-203ENST00000460264 CPLX3Q8WVH0 158 aa19.19■□□□□ 0.66
COL5A1-203ENST00000460264 FEM1CQ96JP0 617 aa19.19■□□□□ 0.66
COL5A1-203ENST00000460264 KLHL32Q96NJ5 620 aa19.19■□□□□ 0.66
COL5A1-203ENST00000460264 NCAPGQ9BPX3 1015 aa19.19■□□□□ 0.66
COL5A1-203ENST00000460264 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.19■□□□□ 0.66
COL5A1-203ENST00000460264 SLC17A9Q9BYT1 436 aa19.19■□□□□ 0.66
COL5A1-203ENST00000460264 UBA2Q9UBT2 640 aaPredicted RBP19.19■□□□□ 0.66
COL5A1-203ENST00000460264 GGT7Q9UJ14 662 aa19.19■□□□□ 0.66
COL5A1-203ENST00000460264 ITM2BQ9Y287 266 aa19.19■□□□□ 0.66
COL5A1-203ENST00000460264 LUC7L2Q9Y383 392 aaKnown RBP19.19■□□□□ 0.66
COL5A1-203ENST00000460264 MFHAS1Q9Y4C4 1052 aa19.19■□□□□ 0.66
COL5A1-203ENST00000460264 TDRD6O60522 2096 aaKnown RBP19.19■□□□□ 0.66
COL5A1-203ENST00000460264 LRRK1Q38SD2 2015 aa19.18■□□□□ 0.66
COL5A1-203ENST00000460264 A0A087X0T9 212 aa19.18■□□□□ 0.66
COL5A1-203ENST00000460264 TSPAN6O43657 245 aa19.18■□□□□ 0.66
COL5A1-203ENST00000460264 PRAMEF11O60813 436 aa19.18■□□□□ 0.66
COL5A1-203ENST00000460264 FAM228BP0C875 321 aa19.18■□□□□ 0.66
COL5A1-203ENST00000460264 PCK1P35558 622 aa19.18■□□□□ 0.66
COL5A1-203ENST00000460264 RAD51Q06609 339 aa19.18■□□□□ 0.66
COL5A1-203ENST00000460264 BNIP3Q12983 259 aa19.18■□□□□ 0.66
COL5A1-203ENST00000460264 MAPK8IP2Q13387 824 aaPredicted RBP19.18■□□□□ 0.66
COL5A1-203ENST00000460264 CYTH1Q15438 398 aa19.18■□□□□ 0.66
COL5A1-203ENST00000460264 AFMIDQ63HM1 303 aa19.18■□□□□ 0.66
COL5A1-203ENST00000460264 GDPD4Q6W3E5 623 aa19.18■□□□□ 0.66
COL5A1-203ENST00000460264 ABI3BPQ7Z7G0 1075 aa19.18■□□□□ 0.66
COL5A1-203ENST00000460264 ZSCAN30Q86W11 494 aa19.18■□□□□ 0.66
COL5A1-203ENST00000460264 NPWQ8N729 165 aa19.18■□□□□ 0.66
COL5A1-203ENST00000460264 OR13H1Q8NG92 308 aa19.18■□□□□ 0.66
COL5A1-203ENST00000460264 EXOC2Q96KP1 924 aa19.18■□□□□ 0.66
COL5A1-203ENST00000460264 SLC39A8Q9C0K1 460 aa19.18■□□□□ 0.66
COL5A1-203ENST00000460264 THAP2Q9H0W7 228 aa19.18■□□□□ 0.66
COL5A1-203ENST00000460264 ASPMQ8IZT6 3477 aa19.18■□□□□ 0.66
COL5A1-203ENST00000460264 TMEM8BA6NDV4 472 aa19.17■□□□□ 0.66
COL5A1-203ENST00000460264 ARHGAP42A6NI28 874 aa19.17■□□□□ 0.66
COL5A1-203ENST00000460264 A6NNZ2 444 aa19.17■□□□□ 0.66
COL5A1-203ENST00000460264 J3KR12 359 aa19.17■□□□□ 0.66
COL5A1-203ENST00000460264 AREL1O15033 823 aa19.17■□□□□ 0.66
COL5A1-203ENST00000460264 RAD51BO15315 384 aa19.17■□□□□ 0.66
COL5A1-203ENST00000460264 DAPK3O43293 454 aa19.17■□□□□ 0.66
COL5A1-203ENST00000460264 TCF4P15884 667 aa19.17■□□□□ 0.66
COL5A1-203ENST00000460264 ERCC2P18074 760 aa19.17■□□□□ 0.66
COL5A1-203ENST00000460264 IL1R2P27930 398 aa19.17■□□□□ 0.66
COL5A1-203ENST00000460264 PAPOLAP51003 745 aaKnown RBP19.17■□□□□ 0.66
COL5A1-203ENST00000460264 ZNF135P52742 658 aaPredicted RBP19.17■□□□□ 0.66
COL5A1-203ENST00000460264 DPYSQ14117 519 aa19.17■□□□□ 0.66
COL5A1-203ENST00000460264 ACAP1Q15027 740 aa19.17■□□□□ 0.66
COL5A1-203ENST00000460264 SKOR2Q2VWA4 1001 aaPredicted RBP19.17■□□□□ 0.66
COL5A1-203ENST00000460264 LRRC73Q5JTD7 316 aa19.17■□□□□ 0.66
COL5A1-203ENST00000460264 ARHGAP12Q8IWW6 846 aa19.17■□□□□ 0.66
COL5A1-203ENST00000460264 SLC22A18ASQ8N1D0 253 aa19.17■□□□□ 0.66
COL5A1-203ENST00000460264 EID2Q8N6I1 236 aa19.17■□□□□ 0.66
COL5A1-203ENST00000460264 KDF1Q8NAX2 398 aaPredicted RBP19.17■□□□□ 0.66
COL5A1-203ENST00000460264 ARHGEF26Q96DR7 871 aa19.17■□□□□ 0.66
COL5A1-203ENST00000460264 C1QTNF2Q9BXJ5 285 aa19.17■□□□□ 0.66
COL5A1-203ENST00000460264 CALN1Q9BXU9 219 aa19.17■□□□□ 0.66
COL5A1-203ENST00000460264 XPO4Q9C0E2 1151 aaKnown RBP19.17■□□□□ 0.66
COL5A1-203ENST00000460264 CWC15Q9P013 229 aaKnown RBP19.17■□□□□ 0.66
COL5A1-203ENST00000460264 ZZEF1O43149 2961 aa19.17■□□□□ 0.66
COL5A1-203ENST00000460264 IGLON5A6NGN9 336 aa19.16■□□□□ 0.66
COL5A1-203ENST00000460264 NEMP1O14524 444 aa19.16■□□□□ 0.66
COL5A1-203ENST00000460264 ENC1O14682 589 aa19.16■□□□□ 0.66
COL5A1-203ENST00000460264 INSIG1O15503 277 aa19.16■□□□□ 0.66
COL5A1-203ENST00000460264 SDC3O75056 442 aa19.16■□□□□ 0.66
COL5A1-203ENST00000460264 PAK4O96013 591 aaPredicted RBP19.16■□□□□ 0.66
COL5A1-203ENST00000460264 HCAR3P49019 387 aa19.16■□□□□ 0.66
COL5A1-203ENST00000460264 PIGHQ14442 188 aaPredicted RBP19.16■□□□□ 0.66
COL5A1-203ENST00000460264 DPYSL2Q16555 572 aa19.16■□□□□ 0.66
COL5A1-203ENST00000460264 SMTNL2Q2TAL5 461 aa19.16■□□□□ 0.66
COL5A1-203ENST00000460264 KYAT3Q6YP21 454 aaKnown RBP19.16■□□□□ 0.66
COL5A1-203ENST00000460264 PTAR1Q7Z6K3 402 aaPredicted RBP19.16■□□□□ 0.66
COL5A1-203ENST00000460264 NIPA2Q8N8Q9 360 aa19.16■□□□□ 0.66
COL5A1-203ENST00000460264 FAM174AQ8TBP5 190 aa19.16■□□□□ 0.66
COL5A1-203ENST00000460264 CNDP2Q96KP4 475 aaKnown RBP19.16■□□□□ 0.66
COL5A1-203ENST00000460264 KLF6Q99612 283 aaPredicted RBP19.16■□□□□ 0.66
COL5A1-203ENST00000460264 CPEB1Q9BZB8 566 aaKnown RBP19.16■□□□□ 0.66
COL5A1-203ENST00000460264 GPR27Q9NS67 375 aa19.16■□□□□ 0.66
COL5A1-203ENST00000460264 KLHL11Q9NVR0 708 aa19.16■□□□□ 0.66
COL5A1-203ENST00000460264 DKK3Q9UBP4 350 aa19.16■□□□□ 0.66
COL5A1-203ENST00000460264 HS3ST3A1Q9Y663 406 aa19.16■□□□□ 0.66
COL5A1-203ENST00000460264 POM121BA6NF01 834 aa19.15■□□□□ 0.66
COL5A1-203ENST00000460264 KRT37O76014 449 aa19.15■□□□□ 0.66
COL5A1-203ENST00000460264 LDOC1O95751 146 aaPredicted RBP19.15■□□□□ 0.66
COL5A1-203ENST00000460264 CYP1A2P05177 515 aa19.15■□□□□ 0.66
COL5A1-203ENST00000460264 CASP14P31944 242 aa19.15■□□□□ 0.66
COL5A1-203ENST00000460264 CCDC157Q569K6 752 aa19.15■□□□□ 0.66
COL5A1-203ENST00000460264 CCNI2Q6ZMN8 369 aaPredicted RBP19.15■□□□□ 0.66
COL5A1-203ENST00000460264 Q6ZSR6 202 aa19.15■□□□□ 0.66
COL5A1-203ENST00000460264 TTC7BQ86TV6 843 aa19.15■□□□□ 0.66
COL5A1-203ENST00000460264 ASB12Q8WXK4 309 aa19.15■□□□□ 0.66
COL5A1-203ENST00000460264 BMFQ96LC9 184 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms