RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 PCSK1NQ9UHG2 260 aa19.68■□□□□ 0.74
USP40-207ENST00000450940 ZZEF1O43149 2961 aa19.67■□□□□ 0.74
USP40-207ENST00000450940 GOLGA6L19H0YKK7 550 aa19.67■□□□□ 0.74
USP40-207ENST00000450940 EEF2KO00418 725 aaKnown RBP19.67■□□□□ 0.74
USP40-207ENST00000450940 AREL1O15033 823 aa19.67■□□□□ 0.74
USP40-207ENST00000450940 SPINT1O43278 529 aa19.67■□□□□ 0.74
USP40-207ENST00000450940 CAPNS1P04632 268 aa19.67■□□□□ 0.74
USP40-207ENST00000450940 SERPING1P05155 500 aa19.67■□□□□ 0.74
USP40-207ENST00000450940 UGT2B4P06133 528 aa19.67■□□□□ 0.74
USP40-207ENST00000450940 THEGLP0DJG4 465 aa19.67■□□□□ 0.74
USP40-207ENST00000450940 PCK1P35558 622 aa19.67■□□□□ 0.74
USP40-207ENST00000450940 ABL2P42684 1182 aa19.67■□□□□ 0.74
USP40-207ENST00000450940 RAD51Q06609 339 aa19.67■□□□□ 0.74
USP40-207ENST00000450940 CYTH1Q15438 398 aa19.67■□□□□ 0.74
USP40-207ENST00000450940 ZSCAN23Q3MJ62 389 aa19.67■□□□□ 0.74
USP40-207ENST00000450940 GDPD4Q6W3E5 623 aa19.67■□□□□ 0.74
USP40-207ENST00000450940 GCNT7Q6ZNI0 430 aa19.67■□□□□ 0.74
USP40-207ENST00000450940 RFX8Q6ZV50 586 aa19.67■□□□□ 0.74
USP40-207ENST00000450940 TMPRSS7Q7RTY8 843 aa19.67■□□□□ 0.74
USP40-207ENST00000450940 ZNF354CQ86Y25 554 aa19.67■□□□□ 0.74
USP40-207ENST00000450940 BMFQ96LC9 184 aa19.67■□□□□ 0.74
USP40-207ENST00000450940 KLHL32Q96NJ5 620 aa19.67■□□□□ 0.74
USP40-207ENST00000450940 LENG8Q96PV6 779 aaPredicted RBP19.67■□□□□ 0.74
USP40-207ENST00000450940 KCTD15Q96SI1 283 aaPredicted RBP19.67■□□□□ 0.74
USP40-207ENST00000450940 CPEB1Q9BZB8 566 aaKnown RBP19.67■□□□□ 0.74
USP40-207ENST00000450940 GPR27Q9NS67 375 aa19.67■□□□□ 0.74
USP40-207ENST00000450940 KLHL11Q9NVR0 708 aa19.67■□□□□ 0.74
USP40-207ENST00000450940 DKK3Q9UBP4 350 aa19.67■□□□□ 0.74
USP40-207ENST00000450940 LHX3Q9UBR4 397 aa19.67■□□□□ 0.74
USP40-207ENST00000450940 FTSJ1Q9UET6 329 aa19.67■□□□□ 0.74
USP40-207ENST00000450940 TDRD6O60522 2096 aaKnown RBP19.67■□□□□ 0.74
USP40-207ENST00000450940 ASPMQ8IZT6 3477 aa19.66■□□□□ 0.74
USP40-207ENST00000450940 PRPSAP2O60256 369 aa19.66■□□□□ 0.74
USP40-207ENST00000450940 PRAMEF11O60813 436 aa19.66■□□□□ 0.74
USP40-207ENST00000450940 IGSF6O95976 241 aa19.66■□□□□ 0.74
USP40-207ENST00000450940 RHOAP61586 193 aa19.66■□□□□ 0.74
USP40-207ENST00000450940 DCP2Q8IU60 420 aaKnown RBP19.66■□□□□ 0.74
USP40-207ENST00000450940 OR13H1Q8NG92 308 aa19.66■□□□□ 0.74
USP40-207ENST00000450940 HCAR2Q8TDS4 363 aa19.66■□□□□ 0.74
USP40-207ENST00000450940 ARHGEF26Q96DR7 871 aa19.66■□□□□ 0.74
USP40-207ENST00000450940 IFT43Q96FT9 208 aa19.66■□□□□ 0.74
USP40-207ENST00000450940 KLF6Q99612 283 aaPredicted RBP19.66■□□□□ 0.74
USP40-207ENST00000450940 SLC39A8Q9C0K1 460 aa19.66■□□□□ 0.74
USP40-207ENST00000450940 FZD3Q9NPG1 666 aa19.66■□□□□ 0.74
USP40-207ENST00000450940 MYO1AQ9UBC5 1043 aa19.66■□□□□ 0.74
USP40-207ENST00000450940 PCDHGA1Q9Y5H4 931 aa19.66■□□□□ 0.74
USP40-207ENST00000450940 DMXL2Q8TDJ6 3036 aa19.66■□□□□ 0.74
USP40-207ENST00000450940 J3KR12 359 aa19.65■□□□□ 0.74
USP40-207ENST00000450940 KRT37O76014 449 aa19.65■□□□□ 0.74
USP40-207ENST00000450940 LDOC1O95751 146 aaPredicted RBP19.65■□□□□ 0.74
USP40-207ENST00000450940 PAK4O96013 591 aaPredicted RBP19.65■□□□□ 0.74
USP40-207ENST00000450940 ERCC2P18074 760 aa19.65■□□□□ 0.74
USP40-207ENST00000450940 CLDN2P57739 230 aa19.65■□□□□ 0.74
USP40-207ENST00000450940 SKOR2Q2VWA4 1001 aaPredicted RBP19.65■□□□□ 0.74
USP40-207ENST00000450940 TDRD12Q587J7 1177 aaKnown RBP19.65■□□□□ 0.74
USP40-207ENST00000450940 VPS36Q86VN1 386 aa19.65■□□□□ 0.74
USP40-207ENST00000450940 ARHGAP12Q8IWW6 846 aa19.65■□□□□ 0.74
USP40-207ENST00000450940 EID2Q8N6I1 236 aa19.65■□□□□ 0.74
USP40-207ENST00000450940 TSC1Q92574 1164 aa19.65■□□□□ 0.74
USP40-207ENST00000450940 MYOCQ99972 504 aa19.65■□□□□ 0.74
USP40-207ENST00000450940 IFNKQ9P0W0 207 aa19.65■□□□□ 0.74
USP40-207ENST00000450940 UBA2Q9UBT2 640 aaPredicted RBP19.65■□□□□ 0.74
USP40-207ENST00000450940 LUC7L2Q9Y383 392 aaKnown RBP19.65■□□□□ 0.74
USP40-207ENST00000450940 A0A087X0T9 212 aa19.64■□□□□ 0.73
USP40-207ENST00000450940 IGLON5A6NGN9 336 aa19.64■□□□□ 0.73
USP40-207ENST00000450940 ARHGAP42A6NI28 874 aa19.64■□□□□ 0.73
USP40-207ENST00000450940 A6NNZ2 444 aa19.64■□□□□ 0.73
USP40-207ENST00000450940 ENC1O14682 589 aa19.64■□□□□ 0.73
USP40-207ENST00000450940 RAD51BO15315 384 aa19.64■□□□□ 0.73
USP40-207ENST00000450940 GYPCP04921 128 aa19.64■□□□□ 0.73
USP40-207ENST00000450940 C1SP09871 688 aa19.64■□□□□ 0.73
USP40-207ENST00000450940 FAM228BP0C875 321 aa19.64■□□□□ 0.73
USP40-207ENST00000450940 HNRNPH3P31942 346 aaKnown RBP19.64■□□□□ 0.73
USP40-207ENST00000450940 PAPOLAP51003 745 aaKnown RBP19.64■□□□□ 0.73
USP40-207ENST00000450940 SUOXP51687 545 aa19.64■□□□□ 0.73
USP40-207ENST00000450940 DPYSQ14117 519 aa19.64■□□□□ 0.73
USP40-207ENST00000450940 GRM3Q14832 879 aa19.64■□□□□ 0.73
USP40-207ENST00000450940 SMAD1Q15797 465 aaKnown RBP19.64■□□□□ 0.73
USP40-207ENST00000450940 DPYSL2Q16555 572 aa19.64■□□□□ 0.73
USP40-207ENST00000450940 BOLA3Q53S33 107 aa19.64■□□□□ 0.73
USP40-207ENST00000450940 KYAT3Q6YP21 454 aaKnown RBP19.64■□□□□ 0.73
USP40-207ENST00000450940 Q6ZSR6 202 aa19.64■□□□□ 0.73
USP40-207ENST00000450940 TTC7BQ86TV6 843 aa19.64■□□□□ 0.73
USP40-207ENST00000450940 SLC22A18ASQ8N1D0 253 aa19.64■□□□□ 0.73
USP40-207ENST00000450940 SLC25A45Q8N413 288 aa19.64■□□□□ 0.73
USP40-207ENST00000450940 NIPA2Q8N8Q9 360 aa19.64■□□□□ 0.73
USP40-207ENST00000450940 NETO2Q8NC67 525 aa19.64■□□□□ 0.73
USP40-207ENST00000450940 CPLX3Q8WVH0 158 aa19.64■□□□□ 0.73
USP40-207ENST00000450940 CELF6Q96J87 481 aaKnown RBP19.64■□□□□ 0.73
USP40-207ENST00000450940 CNDP2Q96KP4 475 aaKnown RBP19.64■□□□□ 0.73
USP40-207ENST00000450940 CWC15Q9P013 229 aaKnown RBP19.64■□□□□ 0.73
USP40-207ENST00000450940 GGT7Q9UJ14 662 aa19.64■□□□□ 0.73
USP40-207ENST00000450940 ZMIZ1Q9ULJ6 1067 aa19.64■□□□□ 0.73
USP40-207ENST00000450940 LRRK1Q38SD2 2015 aa19.64■□□□□ 0.73
USP40-207ENST00000450940 KNTC1P50748 2209 aa19.63■□□□□ 0.73
USP40-207ENST00000450940 GOLGA4Q13439 2230 aaKnown RBP19.63■□□□□ 0.73
USP40-207ENST00000450940 ANKRD36A6QL64 1941 aa19.63■□□□□ 0.73
USP40-207ENST00000450940 TSPAN11A1L157 253 aa19.63■□□□□ 0.73
USP40-207ENST00000450940 POM121BA6NF01 834 aa19.63■□□□□ 0.73
USP40-207ENST00000450940 GOLGA8CPA6NN73 597 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms