RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 UPB1Q9UBR1 384 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 SLC25A10Q9UBX3 287 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 RRP15Q9Y3B9 282 aaKnown RBP4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 JRKLQ9Y4A0 524 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 KIF24Q5T7B8 1368 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 DEPDC5O75140 1603 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 EFCAB6Q5THR3 1501 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 NOS1P29475 1434 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 IL16Q14005 1332 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 CASZ1Q86V15 1759 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 GLI2P10070 1586 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 VWDEQ8N2E2 1590 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 RAD54L2Q9Y4B4 1467 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 PIK3R4Q99570 1358 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 TCRBV7S3A2A0A539 114 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 SLC22A23A1A5C7 686 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 C2CD4BA6NLJ0 364 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 TMCO5BA8MYB1 307 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 PES1O00541 588 aaKnown RBP4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 MSI1O43347 362 aaKnown RBP4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 BAIAP3O94812 1187 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 RTN3O95197 1032 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 F9P00740 461 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 CHRM4P08173 479 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 ZNF853P0CG23 659 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 BMP5P22003 454 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 GGT5P36269 586 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 MAP2K2P36507 400 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 CDH15P55291 814 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 HNRNPH2P55795 449 aaKnown RBP4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 GSDMDP57764 484 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 ZBTB16Q05516 673 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 TDGQ13569 410 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 GALNT3Q14435 633 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 C5orf22Q49AR2 442 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 ZNF766Q5HY98 468 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 EARS2Q5JPH6 523 aaKnown RBP4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 KIAA1755Q5JYT7 1200 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 HYIQ5T013 277 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 MEX3CQ5U5Q3 659 aaKnown RBP4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 FAM171A1Q5VUB5 890 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 LRCH2Q5VUJ6 765 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 NAPEPLDQ6IQ20 393 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 ATF7IPQ6VMQ6 1270 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 ZNF782Q6ZMW2 699 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 RD3Q7Z3Z2 195 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 UBE2Q1Q7Z7E8 422 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 NEK8Q86SG6 692 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 ARL14EPQ8N8R7 260 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 SCAIQ8N9R8 606 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 SETD9Q8NE22 299 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 NFKBIDQ8NI38 313 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 RAB40AQ8WXH6 277 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 IP6K1Q92551 441 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 FRG2BQ96QU4 278 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 EYA3Q99504 573 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 UTP14AQ9BVJ6 771 aaKnown RBP4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 HDAC6Q9UBN7 1215 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 FBXO4Q9UKT5 387 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 TARBP1Q13395 1621 aaKnown RBP4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 CAMSAP1Q5T5Y3 1602 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 PPIP5K1Q6PFW1 1433 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 WDR17Q8IZU2 1322 aa4.71□□□□□ -1.66
HMGB1P16-201ENST00000447155 HECW2Q9P2P5 1572 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 SETD1AO15047 1707 aaKnown RBP4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 KNDC1Q76NI1 1749 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 OR6C68A6NDL8 312 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 MANSC4A6NHS7 340 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 TEX22C9J3V5 150 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 F5H0A9 414 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 GOLGA6L19H0YKK7 550 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 PER2O15055 1255 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 AKAP8O43823 692 aaKnown RBP4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 TMEM63AO94886 807 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 NFATC1O95644 943 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 LATS1O95835 1130 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 LCKP06239 509 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 FCGR2AP12318 317 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 CHRNA5P30532 468 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 RDXP35241 583 aaKnown RBP4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 CASP2P42575 452 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 CYP2J2P51589 502 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 EIF5P55010 431 aaKnown RBP4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 TUBB4BP68371 445 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 SARNPP82979 210 aaKnown RBP4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 FOXF2Q12947 444 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 PTP4A2Q12974 167 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 SLC18A3Q16572 532 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 ALDH1L2Q3SY69 923 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 HSP90B2PQ58FF3 399 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 CCDC158Q5M9N0 1113 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 FAM69AQ5T7M9 428 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 TTLL5Q6EMB2 1281 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 MIS18BP1Q6P0N0 1132 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 INO80CQ6PI98 192 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 TMED8Q6PL24 325 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 LRIG3Q6UXM1 1119 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 SYT10Q6XYQ8 523 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 ZNF66Q6ZN08 573 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms