RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 CUEDC2Q9H467 287 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 RABEP2Q9H5N1 569 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 EPS8L2Q9H6S3 715 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 CWH43Q9H720 699 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 MRPL44Q9H9J2 332 aaKnown RBP4.69□□□□□ -1.66
SF3B1-202ENST00000409915 C17orf75Q9HAS0 396 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 SLC40A1Q9NP59 571 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 SEPT11Q9NVA2 429 aaKnown RBP4.69□□□□□ -1.66
SF3B1-202ENST00000409915 PANK4Q9NVE7 773 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 MIOSQ9NXC5 875 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 NOP53Q9NZM5 478 aaKnown RBP4.69□□□□□ -1.66
SF3B1-202ENST00000409915 DNAJB4Q9UDY4 337 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 MOSPD1Q9UJG1 213 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 FBXL7Q9UJT9 491 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 NAGPAQ9UK23 515 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 FBXL5Q9UKA1 691 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 TNFSF13BQ9Y275 285 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 C15orf41Q9Y2V0 281 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 PRG3Q9Y2Y8 225 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-202ENST00000409915 B3GALT1Q9Y5Z6 326 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 MYO9BQ13459 2157 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 UNC80Q8N2C7 3258 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 NLRC5Q86WI3 1866 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 ZMYM2Q9UBW7 1377 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 PRRC2BQ5JSZ5 2229 aaKnown RBP4.68□□□□□ -1.66
SF3B1-202ENST00000409915 MYH11P35749 1972 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 SYNJ2BP-COX16A0A087WUM0 186 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 FAM237AA0A1B0GTK4 181 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 TARSL2A2RTX5 802 aaKnown RBP4.68□□□□□ -1.66
SF3B1-202ENST00000409915 GOLGA6L4A6NEF3 574 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 CASTOR2A6NHX0 329 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 C1QTNF9BB2RNN3 333 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 ANKRD63C9JTQ0 380 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 H3BNC9 293 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 FAM229AH3BQW9 127 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 FCHO1O14526 889 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 NDC80O14777 642 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 TMPRSS2O15393 492 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 TTI1O43156 1089 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 KLRC4O43908 158 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 CLASP2O75122 1294 aaKnown RBP4.68□□□□□ -1.66
SF3B1-202ENST00000409915 MTRF1O75570 445 aaKnown RBP4.68□□□□□ -1.66
SF3B1-202ENST00000409915 TOM1L1O75674 476 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 SLC22A3O75751 556 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 ZNF189O75820 626 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-202ENST00000409915 ZNF202O95125 648 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 AFPP02771 609 aaKnown RBP4.68□□□□□ -1.66
SF3B1-202ENST00000409915 TK1P04183 234 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 QDPRP09417 244 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 MSL3P1P0C860 447 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 CXCL8P10145 99 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 GAP43P17677 238 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 LAG3P18627 525 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 PROZP22891 400 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 IGFBP6P24592 240 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-202ENST00000409915 DNAJB1P25685 340 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 CA8P35219 290 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 WASP42768 502 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 KCNC1P48547 511 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 SLC11A1P49279 550 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 PPP5CP53041 499 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 OXCT1P55809 520 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 DLG4P78352 724 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 GTF2BQ00403 316 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 SULT2A1Q06520 285 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 SPAG1Q07617 926 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 GALNT2Q10471 571 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 MALLQ13021 153 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 STK4Q13043 487 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 EIF2B5Q13144 721 aaKnown RBP4.68□□□□□ -1.66
SF3B1-202ENST00000409915 MAMLD1Q13495 774 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 PNOCQ13519 176 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 CAMK1Q14012 370 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 TBCEQ15813 527 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-202ENST00000409915 CNGA3Q16281 694 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 BCL2A1Q16548 175 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 FLYWCH1Q4VC44 716 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 HP1BP3Q5SSJ5 553 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-202ENST00000409915 WDR93Q6P2C0 686 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 CRTC3Q6UUV7 619 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 CRTC1Q6UUV9 634 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 MPZL3Q6UWV2 235 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 BBS12Q6ZW61 710 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 UNC13DQ70J99 1090 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 ZNF720Q7Z2F6 126 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 TMC3Q7Z5M5 1100 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 PXKQ7Z7A4 578 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 ADGRD2Q7Z7M1 963 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 LUZP1Q86V48 1076 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 GATAD2AQ86YP4 633 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 ARMC8Q8IUR7 673 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 NELFCDQ8IXH7 590 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 SLC15A3Q8IY34 581 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 PEX5LQ8IYB4 626 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 HACE1Q8IYU2 909 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 FUKQ8N0W3 1084 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 TAGAPQ8N103 731 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 CELF5Q8N6W0 485 aaKnown RBP4.68□□□□□ -1.66
SF3B1-202ENST00000409915 GLIS1Q8NBF1 620 aa4.68□□□□□ -1.66
SF3B1-202ENST00000409915 MAFAQ8NHW3 353 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 903.6 ms