RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 CRADDP78560 199 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 KLF10Q13118 480 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 CAMK2GQ13555 558 aaPredicted RBP8.47□□□□□ -1.05
VPS36-201ENST00000378060 MON1BQ7L1V2 547 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 RNF180Q86T96 592 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 PIGZQ86VD9 579 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 SLC4A11Q8NBS3 891 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 RBM15BQ8NDT2 890 aaKnown RBP8.47□□□□□ -1.05
VPS36-201ENST00000378060 GSTCDQ8NEC7 633 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 SPPL2AQ8TCT8 520 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 RAET1EQ8TD07 263 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 ZFYVE19Q96K21 471 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 PANX3Q96QZ0 392 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 TSPAN18Q96SJ8 248 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 ATXN3LQ9H3M9 355 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 RHOJQ9H4E5 214 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 DENND2DQ9H6A0 471 aaPredicted RBP8.47□□□□□ -1.05
VPS36-201ENST00000378060 ARHGEF3Q9NR81 526 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 AHSPQ9NZD4 102 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 TMEM216Q9P0N5 145 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 CDH9Q9ULB4 789 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 DMTF1Q9Y222 760 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 TCRBV7S2A1N4TA0A589 114 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 ERCC2P18074 760 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 CYP2A7P20853 494 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 AKAP5P24588 427 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 GPC1P35052 558 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 TALDO1P37837 337 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 EIF2B2P49770 351 aaKnown RBP8.47□□□□□ -1.05
VPS36-201ENST00000378060 TRAF3Q13114 568 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 PRKG2Q13237 762 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 DPYSQ14117 519 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 RGS21Q2M5E4 152 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 RFX4Q33E94 735 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 CEP78Q5JTW2 689 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 RNASEH2BQ5TBB1 312 aaKnown RBP8.47□□□□□ -1.05
VPS36-201ENST00000378060 TFAP2DQ7Z6R9 452 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 FAM228AQ86W67 206 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 RIOX2Q8IUF8 465 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 HERC6Q8IVU3 1022 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 CLYBLQ8N0X4 340 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 LPCAT1Q8NF37 534 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 ADAM32Q8TC27 787 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 MAGEE2Q8TD90 523 aaPredicted RBP8.47□□□□□ -1.05
VPS36-201ENST00000378060 MCOLN3Q8TDD5 553 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 CPT1BQ92523 772 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 TMEM169Q96HH4 297 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 SENP8Q96LD8 212 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 BTBD9Q96Q07 612 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 MAF1Q9H063 256 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 COL11A1P12107 1806 aaPredicted RBP8.47□□□□□ -1.05
VPS36-201ENST00000378060 BCLAF3A2AJT9 711 aaKnown RBP8.47□□□□□ -1.05
VPS36-201ENST00000378060 RTN3O95197 1032 aaPredicted RBP8.47□□□□□ -1.05
VPS36-201ENST00000378060 HSMCR30P0CW71 290 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 VAV1P15498 845 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 TFEBP19484 476 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 PPP2R1BP30154 601 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 CDC16Q13042 620 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 TMEM132BQ14DG7 1078 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 PTPN20Q4JDL3 420 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 LIN52Q52LA3 116 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 CELF3Q5SZQ8 465 aaKnown RBP8.47□□□□□ -1.05
VPS36-201ENST00000378060 ZNF618Q5T7W0 954 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 RBM44Q6ZP01 1051 aaKnown RBP8.47□□□□□ -1.05
VPS36-201ENST00000378060 SAPCD2Q86UD0 394 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 C10orf107Q8IVU9 208 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 AMER2Q8N7J2 671 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 IL31RAQ8NI17 732 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 UTP15Q8TED0 518 aaKnown RBP8.47□□□□□ -1.05
VPS36-201ENST00000378060 SLCO2A1Q92959 643 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 ROGDIQ9GZN7 287 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 R3HDMLQ9H3Y0 253 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 ALG9Q9H6U8 611 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 POLR1BQ9H9Y6 1135 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 CATSPERZQ9NTU4 200 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 FAM53CQ9NYF3 392 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 ATXN10Q9UBB4 475 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 OPTCQ9UBM4 332 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 DUSP12Q9UNI6 340 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 INVSQ9Y283 1065 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 RPTORQ8N122 1335 aa8.46□□□□□ -1.05
VPS36-201ENST00000378060 DHRS12A0PJE2 317 aa8.46□□□□□ -1.05
VPS36-201ENST00000378060 PPP1R11O60927 126 aaPredicted RBP8.46□□□□□ -1.05
VPS36-201ENST00000378060 GUCA1CO95843 209 aa8.46□□□□□ -1.05
VPS36-201ENST00000378060 ZNF286BP0CG31 522 aa8.46□□□□□ -1.05
VPS36-201ENST00000378060 CCNB1P14635 433 aa8.46□□□□□ -1.05
VPS36-201ENST00000378060 EPHA3P29320 983 aa8.46□□□□□ -1.05
VPS36-201ENST00000378060 POLD2P49005 469 aa8.46□□□□□ -1.05
VPS36-201ENST00000378060 CLK2P49760 499 aaKnown RBP8.46□□□□□ -1.05
VPS36-201ENST00000378060 ITGA1P56199 1179 aa8.46□□□□□ -1.05
VPS36-201ENST00000378060 INAQ16352 499 aa8.46□□□□□ -1.05
VPS36-201ENST00000378060 PFKFB4Q16877 469 aa8.46□□□□□ -1.05
VPS36-201ENST00000378060 PAN2Q504Q3 1202 aaKnown RBP8.46□□□□□ -1.05
VPS36-201ENST00000378060 INO80DQ53TQ3 878 aaPredicted RBP8.46□□□□□ -1.05
VPS36-201ENST00000378060 LDLRAD1Q5T700 205 aa8.46□□□□□ -1.05
VPS36-201ENST00000378060 GLT6D1Q7Z4J2 308 aa8.46□□□□□ -1.05
VPS36-201ENST00000378060 NECAB2Q7Z6G3 386 aa8.46□□□□□ -1.05
VPS36-201ENST00000378060 PTGR2Q8N8N7 351 aaPredicted RBP8.46□□□□□ -1.05
VPS36-201ENST00000378060 C19orf18Q8NEA5 215 aa8.46□□□□□ -1.05
VPS36-201ENST00000378060 HOPXQ9BPY8 73 aaPredicted RBP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms