RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 USP12O75317 370 aa14.9□□□□□ -0.02
CXCL12-201ENST00000343575 SUN1O94901 812 aa14.9□□□□□ -0.02
CXCL12-201ENST00000343575 AP2A1O95782 977 aa14.9□□□□□ -0.02
CXCL12-201ENST00000343575 AGTP01019 485 aa14.9□□□□□ -0.02
CXCL12-201ENST00000343575 DSC2Q02487 901 aa14.9□□□□□ -0.02
CXCL12-201ENST00000343575 ALG1LQ6GMV1 187 aa14.9□□□□□ -0.02
CXCL12-201ENST00000343575 KIAA0907Q7Z7F0 614 aaPredicted RBP14.9□□□□□ -0.02
CXCL12-201ENST00000343575 C12orf40Q86WS4 652 aa14.9□□□□□ -0.02
CXCL12-201ENST00000343575 OR2W6PQ8NHA6 318 aa14.9□□□□□ -0.02
CXCL12-201ENST00000343575 IMP4Q96G21 291 aaKnown RBP14.9□□□□□ -0.02
CXCL12-201ENST00000343575 ANKRD27Q96NW4 1050 aa14.9□□□□□ -0.02
CXCL12-201ENST00000343575 EBF3Q9H4W6 596 aa14.9□□□□□ -0.02
CXCL12-201ENST00000343575 NOD2Q9HC29 1040 aa14.9□□□□□ -0.02
CXCL12-201ENST00000343575 LRRC4CQ9HCJ2 640 aa14.9□□□□□ -0.02
CXCL12-201ENST00000343575 SAYSD1Q9NPB0 183 aa14.9□□□□□ -0.02
CXCL12-201ENST00000343575 HPS4Q9NQG7 708 aa14.9□□□□□ -0.02
CXCL12-201ENST00000343575 KIAA1522Q9P206 1035 aaPredicted RBP14.9□□□□□ -0.02
CXCL12-201ENST00000343575 UBA2Q9UBT2 640 aaPredicted RBP14.9□□□□□ -0.02
CXCL12-201ENST00000343575 USP15Q9Y4E8 981 aaPredicted RBP14.9□□□□□ -0.02
CXCL12-201ENST00000343575 TTLL3Q9Y4R7 772 aa14.9□□□□□ -0.02
CXCL12-201ENST00000343575 K7ERQ8 282 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 ADRA1AP35348 466 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 MTHFRP42898 656 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 MAGEA4P43358 317 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 CDK16Q00536 496 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 SATB1Q01826 763 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 MESP2Q0VG99 397 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 PDIA2Q13087 525 aaKnown RBP14.89□□□□□ -0.03
CXCL12-201ENST00000343575 ZKSCAN8Q15776 578 aaPredicted RBP14.89□□□□□ -0.03
CXCL12-201ENST00000343575 KYNUQ16719 465 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 FUT11Q495W5 492 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 TMEM215Q68D42 235 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 Q7L0L9 218 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 MFSD6LQ8IWD5 586 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 NAT16Q8N8M0 369 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 C9orf72Q96LT7 481 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 PSKH2Q96QS6 385 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 MGME1Q9BQP7 344 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 PHACTR1Q9C0D0 580 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 SLC25A51Q9H1U9 297 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 PABPC3Q9H361 631 aaKnown RBP14.89□□□□□ -0.03
CXCL12-201ENST00000343575 PLAC1Q9HBJ0 212 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 PIH1D1Q9NWS0 290 aaKnown RBP14.89□□□□□ -0.03
CXCL12-201ENST00000343575 NINJ2Q9NZG7 142 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 COL4A3Q01955 1670 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 GRXCR2A6NFK2 248 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 RIPK2O43353 540 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 CISD3P0C7P0 127 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 CR2P20023 1033 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 CTSOP43234 321 aaPredicted RBP14.89□□□□□ -0.03
CXCL12-201ENST00000343575 ARL4CP56559 192 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 PITRM1Q5JRX3 1037 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 DENND2CQ68D51 928 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 KDELC1Q6UW63 502 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 ADIPOR2Q86V24 386 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 ETFBKMTQ8IXQ9 262 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 MRGPRX2Q96LB1 330 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 SIGLEC10Q96LC7 697 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 KXD1Q9BQD3 176 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.89□□□□□ -0.03
CXCL12-201ENST00000343575 TEX264Q9Y6I9 313 aa14.89□□□□□ -0.03
CXCL12-201ENST00000343575 HOXC11O43248 304 aaPredicted RBP14.88□□□□□ -0.03
CXCL12-201ENST00000343575 SMAD6O43541 496 aaKnown RBP14.88□□□□□ -0.03
CXCL12-201ENST00000343575 ZNF821O75541 412 aaPredicted RBP14.88□□□□□ -0.03
CXCL12-201ENST00000343575 TTC4O95801 387 aa14.88□□□□□ -0.03
CXCL12-201ENST00000343575 IRX1P78414 480 aaPredicted RBP14.88□□□□□ -0.03
CXCL12-201ENST00000343575 GRM2Q14416 872 aa14.88□□□□□ -0.03
CXCL12-201ENST00000343575 SLC29A2Q14542 456 aa14.88□□□□□ -0.03
CXCL12-201ENST00000343575 BBS9Q3SYG4 887 aa14.88□□□□□ -0.03
CXCL12-201ENST00000343575 PRPF38BQ5VTL8 546 aaKnown RBP14.88□□□□□ -0.03
CXCL12-201ENST00000343575 DENND5AQ6IQ26 1287 aa14.88□□□□□ -0.03
CXCL12-201ENST00000343575 CENPUQ71F23 418 aa14.88□□□□□ -0.03
CXCL12-201ENST00000343575 ZBED8Q8IZ13 594 aa14.88□□□□□ -0.03
CXCL12-201ENST00000343575 PDIK1LQ8N165 341 aa14.88□□□□□ -0.03
CXCL12-201ENST00000343575 MPP5Q8N3R9 675 aa14.88□□□□□ -0.03
CXCL12-201ENST00000343575 NSMCE1Q8WV22 266 aa14.88□□□□□ -0.03
CXCL12-201ENST00000343575 MYLIPQ8WY64 445 aa14.88□□□□□ -0.03
CXCL12-201ENST00000343575 VOPP1Q96AW1 172 aa14.88□□□□□ -0.03
CXCL12-201ENST00000343575 CHFRQ96EP1 664 aa14.88□□□□□ -0.03
CXCL12-201ENST00000343575 GAS2L1Q99501 681 aaPredicted RBP14.88□□□□□ -0.03
CXCL12-201ENST00000343575 APOL2Q9BQE5 337 aa14.88□□□□□ -0.03
CXCL12-201ENST00000343575 LHX3Q9UBR4 397 aa14.88□□□□□ -0.03
CXCL12-201ENST00000343575 CD207Q9UJ71 328 aa14.88□□□□□ -0.03
CXCL12-201ENST00000343575 ERI2A8K979 691 aaKnown RBP14.87□□□□□ -0.03
CXCL12-201ENST00000343575 TMCC1O94876 653 aa14.87□□□□□ -0.03
CXCL12-201ENST00000343575 ADH5P11766 374 aa14.87□□□□□ -0.03
CXCL12-201ENST00000343575 PABPC1P11940 636 aaKnown RBP14.87□□□□□ -0.03
CXCL12-201ENST00000343575 ELK3P41970 407 aa14.87□□□□□ -0.03
CXCL12-201ENST00000343575 CD86P42081 329 aa14.87□□□□□ -0.03
CXCL12-201ENST00000343575 GPX6P59796 221 aa14.87□□□□□ -0.03
CXCL12-201ENST00000343575 SLC12A1Q13621 1099 aa14.87□□□□□ -0.03
CXCL12-201ENST00000343575 RFTN1Q14699 578 aaPredicted RBP14.87□□□□□ -0.03
CXCL12-201ENST00000343575 INO80DQ53TQ3 878 aaPredicted RBP14.87□□□□□ -0.03
CXCL12-201ENST00000343575 LRRC8BQ6P9F7 803 aa14.87□□□□□ -0.03
CXCL12-201ENST00000343575 RANBP10Q6VN20 620 aa14.87□□□□□ -0.03
CXCL12-201ENST00000343575 TRMT10CQ7L0Y3 403 aaKnown RBP14.87□□□□□ -0.03
CXCL12-201ENST00000343575 TAOK1Q7L7X3 1001 aa14.87□□□□□ -0.03
CXCL12-201ENST00000343575 ANKMY2Q8IV38 441 aa14.87□□□□□ -0.03
CXCL12-201ENST00000343575 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.87□□□□□ -0.03
CXCL12-201ENST00000343575 OR52K1Q8NGK4 314 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms