RNA–Protein interactions for RNA: ENST00000262354.4

D21S2088E-201, humanhuman

TSL 1 (best) BASIC

Gene D21S2088E, Length 1,725 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
D21S2088E-201ENST00000262354 ATXN1LP0C7T5 689 aaKnown RBP3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 FAM228BP0C875 321 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 CALM1P0DP23 149 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 CALM2P0DP24 149 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 CALM3P0DP25 149 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 SERPINF1P36955 418 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 CPT1AP50416 773 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 CACNA2D1P54289 1103 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 HHEXQ03014 270 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 SULT2A1Q06520 285 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 STK4Q13043 487 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 ARHGEF7Q14155 803 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 GIT2Q14161 759 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 PTK2BQ14289 1009 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 SPARCL1Q14515 664 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 KPNB1Q14974 876 aaKnown RBP3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 INSCQ1MX18 579 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 CNPY1Q3B7I2 92 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 PLA1AQ53H76 456 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 TAF2Q6P1X5 1199 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 VSTM1Q6UX27 236 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 RGS9BPQ6ZS82 235 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 LRRC55Q6ZSA7 311 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 EXOC3L1Q86VI1 746 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 CIR1Q86X95 450 aaPredicted RBP3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 ECHDC2Q86YB7 292 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 NELFCDQ8IXH7 590 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 SYCE1Q8N0S2 351 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 LRRC43Q8N309 656 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 GUF1Q8N442 669 aaKnown RBP3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 SRBD1Q8N5C6 995 aaKnown RBP3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 ATG16L2Q8NAA4 619 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 KIAA0895Q8NCT3 520 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 OR56A1Q8NGH5 318 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 POC1BQ8TC44 478 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 LRRC15Q8TF66 581 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 UCMAQ8WVF2 138 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 TRAPPC12Q8WVT3 735 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 LRIG1Q96JA1 1093 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 SNX27Q96L92 541 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 RMDN2Q96LZ7 410 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 MAGEB18Q96M61 343 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 AK8Q96MA6 479 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 RUNDC3BQ96NL0 473 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 NUDCD1Q96RS6 583 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 MNTQ99583 582 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 SSBP3Q9BWW4 388 aaPredicted RBP3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 SPATA16Q9BXB7 569 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 AP1M1Q9BXS5 423 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 ZCWPW1Q9H0M4 648 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 MAGEH1Q9H213 219 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 RNPEPQ9H4A4 650 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 RNF41Q9H4P4 317 aaPredicted RBP3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 MMRN2Q9H8L6 949 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 KIAA1551Q9HCM1 1747 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 TMEM8AQ9HCN3 771 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 PIH1D3Q9NQM4 214 aaKnown RBP3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 NMRK1Q9NWW6 199 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 ZSCAN32Q9NX65 697 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 GRHL1Q9NZI5 618 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 IL1RAPL1Q9NZN1 696 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 LARSQ9P2J5 1176 aaKnown RBP3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 GRHPRQ9UBQ7 328 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 LNPEPQ9UIQ6 1025 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 PACSIN2Q9UNF0 486 aaPredicted RBP3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 SHOC2Q9UQ13 582 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 ATP11BQ9Y2G3 1177 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 GPR52Q9Y2T5 361 aa3.9□□□□□ -1.79
D21S2088E-201ENST00000262354 COL18A1P39060 1754 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 COL1A1P02452 1464 aaPredicted RBP3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 C10orf71Q711Q0 1435 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 PVALEFA0A1B0GWK0 134 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 TMEM221A6NGB7 291 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 CAPN14A8MX76 684 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 PATE3B3GLJ2 98 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 DIRC3C9JPN6 131 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 H7C4K7 107 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 RASGRF2O14827 1237 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 RIPK2O43353 540 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 SUV39H1O43463 412 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 ATP9AO75110 1047 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 GFPT2O94808 682 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 CSF1RP07333 972 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 T-ENOLP0DO92 83 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 RARGP13631 454 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 HSD3B1P14060 373 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 DESP17661 470 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 EGR1P18146 543 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 KCNA3P22001 575 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 CALML3P27482 149 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 ATP5DP30049 168 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 APOBEC3AP31941 199 aaPredicted RBP3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 MAN1A1P33908 653 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 PRKCIP41743 596 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 RASSF2P50749 326 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 POLGP54098 1239 aaPredicted RBP3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 LOXL3P58215 753 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 RNASE9P60153 205 aaKnown RBP3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 PHEXP78562 749 aa3.89□□□□□ -1.79
D21S2088E-201ENST00000262354 AP1B1Q10567 949 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms