RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 TBC1D3EA0A087X179 549 aa11.19□□□□□ -0.62
KNOP1-201ENST00000219837 TBC1D3KA0A087X1G2 549 aa11.19□□□□□ -0.62
KNOP1-201ENST00000219837 TBC1D3FA6NER0 549 aaPredicted RBP11.19□□□□□ -0.62
KNOP1-201ENST00000219837 TBC1D3LB9A6J9 549 aa11.19□□□□□ -0.62
KNOP1-201ENST00000219837 SNPHO15079 494 aa11.19□□□□□ -0.62
KNOP1-201ENST00000219837 CHADO15335 359 aa11.19□□□□□ -0.62
KNOP1-201ENST00000219837 ASNA1O43681 348 aa11.19□□□□□ -0.62
KNOP1-201ENST00000219837 TBC1D3HP0C7X1 549 aa11.19□□□□□ -0.62
KNOP1-201ENST00000219837 ZSCAN5DPP0CG00 497 aa11.19□□□□□ -0.62
KNOP1-201ENST00000219837 RPL14P50914 215 aaKnown RBP11.19□□□□□ -0.62
KNOP1-201ENST00000219837 FKBP1AP62942 108 aaKnown RBP11.19□□□□□ -0.62
KNOP1-201ENST00000219837 TBC1D3GQ6DHY5 549 aa11.19□□□□□ -0.62
KNOP1-201ENST00000219837 TBC1D3CQ6IPX1 549 aa11.19□□□□□ -0.62
KNOP1-201ENST00000219837 ARMC8Q8IUR7 673 aa11.19□□□□□ -0.62
KNOP1-201ENST00000219837 MAP4K3Q8IVH8 894 aa11.19□□□□□ -0.62
KNOP1-201ENST00000219837 RAVER1Q8IY67 606 aaKnown RBP11.19□□□□□ -0.62
KNOP1-201ENST00000219837 TBC1D3Q8IZP1 549 aaPredicted RBP11.19□□□□□ -0.62
KNOP1-201ENST00000219837 ZNF563Q8TA94 476 aa11.19□□□□□ -0.62
KNOP1-201ENST00000219837 FBXO25Q8TCJ0 367 aa11.19□□□□□ -0.62
KNOP1-201ENST00000219837 C9orf16Q9BUW7 83 aa11.19□□□□□ -0.62
KNOP1-201ENST00000219837 CATP04040 527 aaKnown RBP11.19□□□□□ -0.62
KNOP1-201ENST00000219837 ARMC3Q5W041 872 aa11.19□□□□□ -0.62
KNOP1-201ENST00000219837 PSRC1Q6PGN9 363 aaPredicted RBP11.19□□□□□ -0.62
KNOP1-201ENST00000219837 FAM151BQ6UXP7 276 aa11.19□□□□□ -0.62
KNOP1-201ENST00000219837 KIAA0319LQ8IZA0 1049 aa11.19□□□□□ -0.62
KNOP1-201ENST00000219837 C2orf73Q8N5S3 287 aaPredicted RBP11.19□□□□□ -0.62
KNOP1-201ENST00000219837 RORBQ92753 470 aa11.19□□□□□ -0.62
KNOP1-201ENST00000219837 RAD51AP1Q96B01 352 aa11.19□□□□□ -0.62
KNOP1-201ENST00000219837 VCPIP1Q96JH7 1222 aa11.19□□□□□ -0.62
KNOP1-201ENST00000219837 VAT1Q99536 393 aa11.19□□□□□ -0.62
KNOP1-201ENST00000219837 ACO2Q99798 780 aaKnown RBP11.19□□□□□ -0.62
KNOP1-201ENST00000219837 SEMA4AQ9H3S1 761 aa11.19□□□□□ -0.62
KNOP1-201ENST00000219837 ZFP14Q9HCL3 533 aa11.19□□□□□ -0.62
KNOP1-201ENST00000219837 INTS7Q9NVH2 962 aaKnown RBP11.19□□□□□ -0.62
KNOP1-201ENST00000219837 APODP05090 189 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 CSH1P0DML2 217 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 CSH2P0DML3 217 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 IRF8Q02556 426 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 PEX6Q13608 980 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 CENPIQ92674 756 aaPredicted RBP11.18□□□□□ -0.62
KNOP1-201ENST00000219837 CAVIN3Q969G5 261 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 ARMCX1Q9P291 453 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 PSME2Q9UL46 239 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 ZMYM2Q9UBW7 1377 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 SLC15A5A6NIM6 579 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 SLC28A2O43868 658 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 TAS2R41P59536 307 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 SQLEQ14534 574 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 ATL1Q8WXF7 558 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 CDRT15Q96T59 188 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 F8VP50 259 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 CACNB4O00305 520 aaPredicted RBP11.18□□□□□ -0.62
KNOP1-201ENST00000219837 PDE9AO76083 593 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 NTRK1P04629 796 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 EIF4BP23588 611 aaKnown RBP11.18□□□□□ -0.62
KNOP1-201ENST00000219837 TTPAP49638 278 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 ITGA1P56199 1179 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 MAP2K5Q13163 448 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 RRP1BQ14684 758 aaKnown RBP11.18□□□□□ -0.62
KNOP1-201ENST00000219837 SPATA6LQ8N4H0 392 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 NEK7Q8TDX7 302 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 ZNF75CPQ92670 426 aaPredicted RBP11.18□□□□□ -0.62
KNOP1-201ENST00000219837 SPATA5L1Q9BVQ7 753 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 KCNN2Q9H2S1 579 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 SLC35C2Q9NQQ7 365 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 ST3GAL5Q9UNP4 418 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 VWDEQ8N2E2 1590 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 NT5C1B-RDH14C9J2C7 533 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 BANF1O75531 89 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 FARP2O94887 1054 aaPredicted RBP11.18□□□□□ -0.62
KNOP1-201ENST00000219837 TSPAN8P19075 237 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 PKNOX1P55347 436 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 CDC42P60953 191 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 GCNT1Q02742 428 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 TSC22D1Q15714 1073 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 MPPE1Q53F39 396 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 DCLRE1AQ6PJP8 1040 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 FAM129CQ86XR2 697 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 NKAPQ8N5F7 415 aaKnown RBP11.18□□□□□ -0.62
KNOP1-201ENST00000219837 STAG3L4Q8TBR4 150 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 DGCR6LQ9BY27 220 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 OGDHLQ9ULD0 1010 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 NPEPPSL1A6NEC2 478 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 FCHO1O14526 889 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 ELFN1P0C7U0 828 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 LINC00032P0C843 101 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 GLRA2P23416 452 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 DEF8Q6ZN54 512 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 KATNAL2Q8IYT4 538 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 ZCCHC9Q8N567 271 aaKnown RBP11.18□□□□□ -0.62
KNOP1-201ENST00000219837 SLC47A1Q96FL8 570 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 SLC27A6Q9Y2P4 619 aa11.18□□□□□ -0.62
KNOP1-201ENST00000219837 RPTORQ8N122 1335 aa11.17□□□□□ -0.62
KNOP1-201ENST00000219837 GCATO75600 419 aa11.17□□□□□ -0.62
KNOP1-201ENST00000219837 SLC35G4P0C7Q5 338 aa11.17□□□□□ -0.62
KNOP1-201ENST00000219837 ALADP13716 330 aa11.17□□□□□ -0.62
KNOP1-201ENST00000219837 PRKAR2AP13861 404 aaKnown RBP11.17□□□□□ -0.62
KNOP1-201ENST00000219837 CHKAP35790 457 aa11.17□□□□□ -0.62
KNOP1-201ENST00000219837 RPL38P63173 70 aaKnown RBP11.17□□□□□ -0.62
KNOP1-201ENST00000219837 TARBP2Q15633 366 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms