RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 BOLA3Q53S33 107 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 LEKR1Q6ZMV7 388 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 CYP4V2Q6ZWL3 525 aaPredicted RBP10.69□□□□□ -0.7
CCDC9-203ENST00000596938 SPATS2Q86XZ4 545 aaKnown RBP10.69□□□□□ -0.7
CCDC9-203ENST00000596938 OXR1Q8N573 874 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 TMEM145Q8NBT3 493 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 FAM174AQ8TBP5 190 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 SAP25Q8TEE9 199 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 ASB12Q8WXK4 309 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 ADAMTS14Q8WXS8 1223 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 ZNF653Q96CK0 615 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 FEM1CQ96JP0 617 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 PEBP4Q96S96 227 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.69□□□□□ -0.7
CCDC9-203ENST00000596938 SNRNP25Q9BV90 132 aaKnown RBP10.69□□□□□ -0.7
CCDC9-203ENST00000596938 SCNM1Q9BWG6 230 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 OSBPL1AQ9BXW6 950 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 TM6SF2Q9BZW4 377 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 KLC2Q9H0B6 622 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 DHX35Q9H5Z1 703 aaKnown RBP10.69□□□□□ -0.7
CCDC9-203ENST00000596938 PCSK1NQ9UHG2 260 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 AP4E1Q9UPM8 1137 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 ZFR2Q9UPR6 939 aaKnown RBP10.69□□□□□ -0.7
CCDC9-203ENST00000596938 APOBEC2Q9Y235 224 aaKnown RBP10.69□□□□□ -0.7
CCDC9-203ENST00000596938 BTBD3Q9Y2F9 522 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.69□□□□□ -0.73e-7■■□□□ 11.8
CCDC9-203ENST00000596938 HS3ST3A1Q9Y663 406 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 ACACBO00763 2458 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 ASCC3Q8N3C0 2202 aaKnown RBP10.69□□□□□ -0.7
CCDC9-203ENST00000596938 NUMA1Q14980 2115 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 FRYQ5TBA9 3013 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 CEP192Q8TEP8 1941 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 CHD8Q9HCK8 2581 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 A0A087X0T9 212 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 C16orf96A6NNT2 1141 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 EEF2KO00418 725 aaKnown RBP10.68□□□□□ -0.7
CCDC9-203ENST00000596938 KRIT1O00522 736 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 SLC31A1O15431 190 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 TNFSF14O43557 240 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 TSPAN6O43657 245 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 HYAL3O43820 417 aaPredicted RBP10.68□□□□□ -0.7
CCDC9-203ENST00000596938 LRCH4O75427 683 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 DKK1O94907 266 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 TOP3BO95985 862 aaKnown RBP10.68□□□□□ -0.7
CCDC9-203ENST00000596938 GYPCP04921 128 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 CYP1A2P05177 515 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 FTH1P19P0C7X4 201 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 FAM228BP0C875 321 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 HNRNPA2B1P22626 353 aaKnown RBP10.68□□□□□ -0.7
CCDC9-203ENST00000596938 AKT2P31751 481 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 GKP32189 559 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 RAD51Q06609 339 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 PIGHQ14442 188 aaPredicted RBP10.68□□□□□ -0.7
CCDC9-203ENST00000596938 CYTH1Q15438 398 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 INAVAQ3KP66 663 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 TDRD12Q587J7 1177 aaKnown RBP10.68□□□□□ -0.7
CCDC9-203ENST00000596938 PRAMEF14Q5SWL7 426 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 AFMIDQ63HM1 303 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 KIAA1161Q6NSJ0 714 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 GDPD4Q6W3E5 623 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 RFX8Q6ZV50 586 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 SLCO6A1Q86UG4 719 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 ZNF354CQ86Y25 554 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 RYBPQ8N488 228 aaPredicted RBP10.68□□□□□ -0.7
CCDC9-203ENST00000596938 CHCHD4Q8N4Q1 142 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 HCAR2Q8TDS4 363 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 KLHDC7BQ96G42 594 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 GDAP1L1Q96MZ0 367 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 LENG8Q96PV6 779 aaPredicted RBP10.68□□□□□ -0.7
CCDC9-203ENST00000596938 SLC17A9Q9BYT1 436 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 CPEB1Q9BZB8 566 aaKnown RBP10.68□□□□□ -0.7
CCDC9-203ENST00000596938 XPO4Q9C0E2 1151 aaKnown RBP10.68□□□□□ -0.7
CCDC9-203ENST00000596938 SLC39A8Q9C0K1 460 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 ZDHHC6Q9H6R6 413 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 GPATCH2LQ9NWQ4 482 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 MYO1AQ9UBC5 1043 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 DKK3Q9UBP4 350 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 MSRB2Q9Y3D2 182 aa10.68□□□□□ -0.7
CCDC9-203ENST00000596938 TPRP12270 2363 aaKnown RBP10.67□□□□□ -0.7
CCDC9-203ENST00000596938 ARHGAP42A6NI28 874 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 AREL1O15033 823 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 DAPK3O43293 454 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 PRAMEF11O60813 436 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 ITGAVP06756 1048 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 PROS1P07225 676 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 ATXN1LP0C7T5 689 aaKnown RBP10.67□□□□□ -0.7
CCDC9-203ENST00000596938 PRLRP16471 622 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 ERCC2P18074 760 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 SPINK2P20155 84 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 CSNK1DP48730 415 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 PAPOLAP51003 745 aaKnown RBP10.67□□□□□ -0.7
CCDC9-203ENST00000596938 SUOXP51687 545 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 RHOAP61586 193 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 GRM3Q14832 879 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 DPYSL2Q16555 572 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 ATXN7L2Q5T6C5 722 aaPredicted RBP10.67□□□□□ -0.7
CCDC9-203ENST00000596938 SEL1L3Q68CR1 1132 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 ALKBH5Q6P6C2 394 aaKnown RBP10.67□□□□□ -0.7
CCDC9-203ENST00000596938 PARS2Q7L3T8 475 aaKnown RBP10.67□□□□□ -0.7
CCDC9-203ENST00000596938 ABI3BPQ7Z7G0 1075 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms