RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 RAP1GAP2Q684P5 730 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 ICA1LQ8NDH6 482 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 OR9I1Q8NGQ6 314 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 DIS3LQ8TF46 1054 aaKnown RBP13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 ESAMQ96AP7 390 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 ZNF419Q96HQ0 510 aaPredicted RBP13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 GORASP1Q9BQQ3 440 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 PCDHAC1Q9H158 963 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 TRPC7Q9HCX4 862 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 S100A14Q9HCY8 104 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 ZNF212Q9UDV6 495 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 CORO1CQ9ULV4 474 aaPredicted RBP13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 IQCA1LA6NCM1 817 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 GLTPD2A6NH11 291 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 G3V2L1 256 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 CNTN5O94779 1100 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 ALDH1A2O94788 518 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 XRCC1P18887 633 aaPredicted RBP13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 THOP1P52888 689 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 PAFAH1B3Q15102 231 aaKnown RBP13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 TRIM67Q6ZTA4 783 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 DHDDSQ86SQ9 333 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 ZC3HC1Q86WB0 502 aaKnown RBP13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 BHLHE22Q8NFJ8 381 aaPredicted RBP13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 HEXDCQ8WVB3 486 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 RPRD1AQ96P16 312 aaPredicted RBP13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 PPP1R10Q96QC0 940 aaKnown RBP13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 NMUR1Q9HB89 426 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 PTGDR2Q9Y5Y4 395 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 ZNF638Q14966 1978 aaKnown RBP13.83□□□□□ -0.19
PRPF40B-209ENST00000548825 ANK1P16157 1881 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 KCNU1A8MYU2 1149 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 DLX3O60479 287 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 MGEA5O60502 916 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 MAGEC1O60732 1142 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 DDHD2O94830 711 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 CHRNA1P02708 482 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 ELNP15502 786 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 MAGEA6P43360 314 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 WNT3AP56704 352 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 YWHAHQ04917 246 aaPredicted RBP13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 GALNT3Q14435 633 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 MGAT5BQ3V5L5 792 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 AGKQ53H12 422 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 NEPROQ6NW34 567 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 DDIASQ8IXT1 998 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 ACMSDQ8TDX5 336 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 SMIM14Q96QK8 99 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 SPC25Q9HBM1 224 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 UTP6Q9NYH9 597 aaKnown RBP13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 FBXO5Q9UKT4 447 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 PCDHB12Q9Y5F1 795 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 DNAJA2O60884 412 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 RNASEH1O60930 286 aaKnown RBP13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 FBXO21O94952 628 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 ZNF865P0CJ78 1059 aaPredicted RBP13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 PRSS56P0CW18 603 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 CA8P35219 290 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 CDC42EP1Q00587 391 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 SLC10A7Q0GE19 358 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 FAM83EQ2M2I3 478 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 C10orf120Q5SQS8 335 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 STEAP4Q687X5 459 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 DSELQ8IZU8 1212 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 OR6Y1Q8NGX8 325 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 FAM50BQ9Y247 325 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 SLC4A7Q9Y6M7 1214 aa13.83□□□□□ -0.2
PRPF40B-209ENST00000548825 ERI2A8K979 691 aaKnown RBP13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 HDAC3O15379 428 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 CPB1P15086 417 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 PMLP29590 882 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 AXLP30530 894 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 CPOXP36551 454 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 PURAQ00577 322 aaKnown RBP13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 CCNIQ14094 377 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 MAP7D1Q3KQU3 841 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 LRRC8EQ6NSJ5 796 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 TMEM135Q86UB9 458 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 THEM5Q8N1Q8 247 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 GIPC2Q8TF65 315 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 HDAC10Q969S8 669 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 NMD3Q96D46 503 aaKnown RBP13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 FAM193BQ96PV7 902 aaPredicted RBP13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 FBRSL1Q9HCM7 1045 aaKnown RBP13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 BNIP3LO60238 219 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 F9P00740 461 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 LYNP07948 512 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 SLC35E2BP0CK96 405 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 AOC1P19801 751 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 KCNA5P22460 613 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 PDAP1Q13442 181 aaKnown RBP13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 TUBB3Q13509 450 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 ZNF280BQ86YH2 543 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 KYQ8NBH2 561 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 ZC3H15Q8WU90 426 aaKnown RBP13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 PSMG2Q969U7 264 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 SLC2A13Q96QE2 648 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 HBEGFQ99075 208 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 TRIM4Q9C037 500 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms