RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 HNF1BP35680 557 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 MCM2P49736 904 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 COMPP49747 757 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 ART1P52961 327 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 SLC18A2Q05940 514 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 DSC1Q08554 894 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 CAPSQ13938 189 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 KRT72Q14CN4 511 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 CBWD5Q5RIA9 395 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 C9orf57Q5W0N0 161 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 CREB3L2Q70SY1 520 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 C16orf82Q7Z2V1 217 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 FTSJ3Q8IY81 847 aaKnown RBP3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 RBFAQ8N0V3 343 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 TMEM57Q8N5G2 664 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 TMEM163Q8TC26 289 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 NCSTNQ92542 709 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 PPP1R10Q96QC0 940 aaKnown RBP3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 FIZ1Q96SL8 496 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 ARPC5LQ9BPX5 153 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 LMAN2LQ9H0V9 348 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 CLK4Q9HAZ1 481 aaKnown RBP3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 ITM2CQ9NQX7 267 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 PLSCR4Q9NRQ2 329 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 CD207Q9UJ71 328 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 hCG_1642624A0A1W2PR95 340 aa3.58□□□□□ -1.84
HMGB1P29-201ENST00000505659 TIMM23O14925 209 aa3.58□□□□□ -1.84
HMGB1P29-201ENST00000505659 KCNJ13O60928 360 aa3.58□□□□□ -1.84
HMGB1P29-201ENST00000505659 SERPINC1P01008 464 aa3.58□□□□□ -1.84
HMGB1P29-201ENST00000505659 CTPS1P17812 591 aa3.58□□□□□ -1.84
HMGB1P29-201ENST00000505659 C21orf33P30042 268 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P29-201ENST00000505659 MXI1P50539 228 aa3.58□□□□□ -1.84
HMGB1P29-201ENST00000505659 ARSFP54793 590 aa3.58□□□□□ -1.84
HMGB1P29-201ENST00000505659 PDCD2Q16342 344 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P29-201ENST00000505659 MON1AQ86VX9 555 aa3.58□□□□□ -1.84
HMGB1P29-201ENST00000505659 GHDCQ8N2G8 530 aa3.58□□□□□ -1.84
HMGB1P29-201ENST00000505659 ANKRD44Q8N8A2 993 aa3.58□□□□□ -1.84
HMGB1P29-201ENST00000505659 SPPL3Q8TCT6 385 aa3.58□□□□□ -1.84
HMGB1P29-201ENST00000505659 TBC1D22AQ8WUA7 517 aa3.58□□□□□ -1.84
HMGB1P29-201ENST00000505659 SDCCAG3Q96C92 435 aa3.58□□□□□ -1.84
HMGB1P29-201ENST00000505659 TXNDC15Q96J42 360 aa3.58□□□□□ -1.84
HMGB1P29-201ENST00000505659 SLITRK1Q96PX8 696 aa3.58□□□□□ -1.84
HMGB1P29-201ENST00000505659 RPS6KC1Q96S38 1066 aa3.58□□□□□ -1.84
HMGB1P29-201ENST00000505659 CLSTN3Q9BQT9 956 aa3.58□□□□□ -1.84
HMGB1P29-201ENST00000505659 NPLQ9BXD5 320 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P29-201ENST00000505659 CDT1Q9H211 546 aa3.58□□□□□ -1.84
HMGB1P29-201ENST00000505659 IL25Q9H293 177 aa3.58□□□□□ -1.84
HMGB1P29-201ENST00000505659 IL36RNQ9UBH0 155 aa3.58□□□□□ -1.84
HMGB1P29-201ENST00000505659 FBXO40Q9UH90 709 aa3.58□□□□□ -1.84
HMGB1P29-201ENST00000505659 RRP7AQ9Y3A4 280 aaKnown RBP3.58□□□□□ -1.84
HMGB1P29-201ENST00000505659 A0A096LPK6 155 aa3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 IGLV5-52A0A0A0MRZ9 124 aa3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 DYTNA2CJ06 578 aa3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 J3KR12 359 aa3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 PEX12O00623 359 aa3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 DHRS4L1P0CG22 281 aa3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 GRK6P43250 576 aa3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 CYP4A11Q02928 519 aa3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 FAM27E3Q08E93 113 aa3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 COASYQ13057 564 aa3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 SLC18A3Q16572 532 aa3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 CTXN3Q4LDR2 81 aa3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 DENND1BQ6P3S1 775 aa3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 C2CD5Q86YS7 1000 aa3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 TMC8Q8IU68 726 aa3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 HERC6Q8IVU3 1022 aa3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 DNAAF1Q8NEP3 725 aa3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 FAM216AQ8WUB2 273 aa3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 TBC1D20Q96BZ9 403 aa3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 COG8Q96MW5 612 aa3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 YME1L1Q96TA2 773 aa3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 MROH8Q9H579 483 aa3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 SLC32A1Q9H598 525 aa3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 STN1Q9H668 368 aaKnown RBP3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 TTC12Q9H892 705 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 TMEM51Q9NW97 253 aa3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 AGO1Q9UL18 857 aaKnown RBP3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 CLDN16Q9Y5I7 305 aa3.57□□□□□ -1.84
HMGB1P29-201ENST00000505659 TCF20Q9UGU0 1960 aaKnown RBP3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 A0A087WYN8 130 aa3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 A0A1B0GUV1 79 aa3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 EME2A4GXA9 379 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 SMTNL1A8MU46 457 aa3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 BTBD18B2RXH4 712 aa3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 CHL1O00533 1208 aa3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 KLK10O43240 276 aa3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 TCEA3O75764 348 aa3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 SERPINI2O75830 405 aa3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 AFPP02771 609 aaKnown RBP3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 HMGB1P09429 215 aaKnown RBP3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 TTKP33981 857 aa3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 GPR12P47775 334 aa3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 CXCR3P49682 368 aa3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 GAS1P54826 345 aa3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 SEC61A1P61619 476 aaKnown RBP3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 RPL36AP83881 106 aaKnown RBP3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 EEF1A2Q05639 463 aaKnown RBP3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 GOLGA8FQ08AF8 430 aa3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 LPIN1Q14693 890 aa3.56□□□□□ -1.84
HMGB1P29-201ENST00000505659 HLFQ16534 295 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms