RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 APOPT1Q96IL0 206 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 C16orf45Q96MC5 204 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 PRDM13Q9H4Q3 707 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 RIOX1Q9H6W3 641 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 MLXIPLQ9NP71 852 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 TMEM248Q9NWD8 314 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 IRAK4Q9NWZ3 460 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 ARL15Q9NXU5 204 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 MAP3K4Q9Y6R4 1608 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 CDC42BPGQ6DT37 1551 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 SETBP1Q9Y6X0 1596 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 ITIH6Q6UXX5 1313 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 PTCH1Q13635 1447 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 TMEM247A6NEH6 219 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 TBX18O95935 607 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 NUDT3O95989 172 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 CAPN2P17655 700 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 TFEBP19484 476 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 ABCD3P28288 659 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 TYK2P29597 1187 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 HOXA7P31268 230 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 GJC1P36383 396 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 PAFAH1B1P43034 410 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 SLC12A2P55011 1212 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 CASP6P55212 293 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 PROK1P58294 105 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 UBE2HP62256 183 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 YPEL5P62699 121 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 NHLH1Q02575 133 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 SLC10A2Q12908 348 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 NAA25Q14CX7 972 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 ZSCAN26Q16670 478 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 ARL13AQ5H913 290 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 SH2D4BQ5SQS7 431 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 DSTYKQ6XUX3 929 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 ZNF788Q6ZQV5 615 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 ARMC8Q8IUR7 673 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 EFCAB13Q8IY85 973 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 TNIP2Q8NFZ5 429 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 BCAS4Q8TDM0 211 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 NOC3LQ8WTT2 800 aaKnown RBP4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 C5orf34Q96MH7 638 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 CADM1Q9BY67 442 aaKnown RBP4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 KRTAP9-3Q9BYQ3 159 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 INTS2Q9H0H0 1204 aaKnown RBP4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 TTC12Q9H892 705 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 MED4Q9NPJ6 270 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 BEX4Q9NWD9 120 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 PPP1R14DQ9NXH3 145 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 PSD3Q9NYI0 1048 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 DONSONQ9NYP3 566 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 IPO11Q9UI26 975 aaKnown RBP4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 SLC8A2Q9UPR5 921 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 OSGIN2Q9Y236 505 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 PLEKHG2Q9H7P9 1386 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 ZNF518AQ6AHZ1 1483 aa4.73□□□□□ -1.65
HMGB1P16-201ENST00000447155 ADGRL3Q9HAR2 1447 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 GPATCH8Q9UKJ3 1502 aaKnown RBP4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 GAGE10A6NGK3 116 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 C17orf100A8MU93 164 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 TNPO2O14787 897 aaKnown RBP4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 TSPAN4O14817 238 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 STRNO43815 780 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 HBP1O60381 514 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 PRKCGP05129 697 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 CD63P08962 238 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 MX1P20591 662 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 MAGEA9P43362 315 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 MTNR1AP48039 350 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 RXRGP48443 463 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 CCT4P50991 539 aaKnown RBP4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 RHAGQ02094 409 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 ZNF268Q14587 947 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 IL13RA2Q14627 380 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 PTPN14Q15678 1187 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 PRICKLE4Q2TBC4 344 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 AP5B1Q2VPB7 878 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 PLK5Q496M5 336 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 VWA5B1Q5TIE3 1220 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 FAM180BQ6P0A1 224 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 SLC22A25Q6T423 547 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 KRBA2Q6ZNG9 492 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 C1orf122Q6ZSJ8 110 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 ERC1Q8IUD2 1116 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 C10orf67Q8IYJ2 551 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 IQUBQ8NA54 791 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 RUFY2Q8WXA3 655 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 CNOT9Q92600 299 aaKnown RBP4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 EXOC4Q96A65 974 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 ELP4Q96EB1 424 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 C7orf26Q96N11 449 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 CLSTN3Q9BQT9 956 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 KRTAP17-1Q9BYP8 105 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 LMAN2LQ9H0V9 348 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 R3HDMLQ9H3Y0 253 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 Q9N2J8 555 aa4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P16-201ENST00000447155 HCN3Q9P1Z3 774 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms