RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 NTAN1Q96AB6 310 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 MPP6Q9NZW5 540 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 E9PBE3 544 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 KLHL41O60662 606 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 HDCP19113 662 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 SQLEQ14534 574 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 SGO1Q5FBB7 561 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 STXBP5Q5T5C0 1151 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 PGBD3Q8N328 593 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 SPASTQ9UBP0 616 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 TRAFD1O14545 582 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-208ENST00000430669 ZW10O43264 779 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 ALDH1A2O94788 518 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 ARIH2O95376 493 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 FTH1P02794 183 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 EDNRBP24530 442 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 ZNF33AQ06730 810 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 CYP51A1Q16850 503 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 RAP1GAP2Q684P5 730 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 ZNF516Q92618 1163 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 DOCK3Q8IZD9 2030 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 NCF1BA6NI72 391 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-208ENST00000430669 NCF1CA8MVU1 366 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-208ENST00000430669 NR5A2O00482 541 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 ZBTB14O43829 449 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 NCF1P14598 390 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-208ENST00000430669 POLE2P56282 527 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 ATP13A4Q4VNC1 1196 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 ARMC3Q5W041 872 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 ANKS6Q68DC2 871 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 ADGRD1Q6QNK2 874 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 SHISA4Q96DD7 197 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 SLC25A23Q9BV35 468 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 SLC7A5P2Q9GIP4 190 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 CORO2BQ9UQ03 480 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 A0A1W2PQH9 124 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 TBL1XO60907 577 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 ATP6V1G2O95670 118 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 CHRNB3Q05901 458 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 NR6A1Q15406 480 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 PAGE2BQ5JRK9 111 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 NET1Q7Z628 596 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-208ENST00000430669 LGMNQ99538 433 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 KCTD14Q9BQ13 255 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-208ENST00000430669 BDH2Q9BUT1 245 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 TLR6Q9Y2C9 796 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 PLLPQ9Y342 182 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 SSC5DA1L4H1 1573 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 TPH1P17752 444 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 PTGIRP43119 386 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 RFTN1Q14699 578 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-208ENST00000430669 THUMPD3Q9BV44 507 aaKnown RBP11.66□□□□□ -0.54
PTCH1-208ENST00000430669 RETREG1Q9H6L5 497 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 PARVBQ9HBI1 364 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 MID1IP1Q9NPA3 183 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 OPTCQ9UBM4 332 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 NRXN2Q9P2S2 1712 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 CD3EAPO15446 510 aaKnown RBP11.66□□□□□ -0.54
PTCH1-208ENST00000430669 RFC2P35250 354 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 ACOX1Q15067 660 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 TRIP4Q15650 581 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-208ENST00000430669 RNASEH2BQ5TBB1 312 aaKnown RBP11.66□□□□□ -0.54
PTCH1-208ENST00000430669 TMEM132CQ8N3T6 1108 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 WARS2Q9UGM6 360 aaKnown RBP11.66□□□□□ -0.54
PTCH1-208ENST00000430669 MAGEA13PA6NCF6 341 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 CHI3L1P36222 383 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-208ENST00000430669 RBFAQ8N0V3 343 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 JOSD2Q8TAC2 188 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 RNF217Q8TC41 542 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 STYXQ8WUJ0 223 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 PHF21BQ96EK2 531 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 SGF29Q96ES7 293 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 IKZF4Q9H2S9 585 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 APOBEC3GQ9HC16 384 aaKnown RBP11.66□□□□□ -0.54
PTCH1-208ENST00000430669 SCN3BQ9NY72 215 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 FCHO1O14526 889 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 F2P00734 622 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 MZF1P28698 734 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-208ENST00000430669 RPL3P39023 403 aaKnown RBP11.66□□□□□ -0.54
PTCH1-208ENST00000430669 SKP1P63208 163 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 MAMDC4Q6UXC1 1216 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 ACTR8Q9H981 624 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 NDUFAF1Q9Y375 327 aa11.66□□□□□ -0.54
PTCH1-208ENST00000430669 AGKQ53H12 422 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 EXOC3L1Q86VI1 746 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 VPS33AQ96AX1 596 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 HGH1Q9BTY7 390 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 SLC4A5Q9BY07 1137 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 SALL4Q9UJQ4 1053 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 TMEM59LQ9UK28 342 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 GON4LQ3T8J9 2241 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 BTN3A1O00481 513 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 PRIM2P49643 509 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 UNC5AQ6ZN44 842 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 TMEM110Q86TL2 294 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 BRI3BPQ8WY22 251 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 SDCBP2Q9H190 292 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 SNX6Q9UNH7 406 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 CRYL1Q9Y2S2 319 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 DGKIO75912 1065 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms