RNA–Protein interactions for RNA: ENST00000379235.5

UBAP2-203, Transcript of ubiquitin associated protein 2, humanhuman

TSL 1 (best)

Gene UBAP2, Length 2,673 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2-203ENST00000379235 USP3Q9Y6I4 520 aa11.37□□□□□ -0.59
UBAP2-203ENST00000379235 KIAA1217Q5T5P2 1943 aa11.37□□□□□ -0.59
UBAP2-203ENST00000379235 TARM1B6A8C7 271 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 CFAP99D6REC4 459 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 SEC24DO94855 1032 aaPredicted RBP11.36□□□□□ -0.59
UBAP2-203ENST00000379235 ZNF182P17025 639 aaPredicted RBP11.36□□□□□ -0.59
UBAP2-203ENST00000379235 ATXN1P54253 815 aaKnown RBP11.36□□□□□ -0.59
UBAP2-203ENST00000379235 OSTNP61366 133 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 GRSF1Q12849 480 aaKnown RBP eCLIP11.36□□□□□ -0.59
UBAP2-203ENST00000379235 STX5Q13190 355 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 FRG1Q14331 258 aaKnown RBP11.36□□□□□ -0.59
UBAP2-203ENST00000379235 LCLAT1Q6UWP7 414 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 KCTD8Q6ZWB6 473 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 ZBTB46Q86UZ6 589 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 CAMK1DQ8IU85 385 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 OR2T34Q8NGX1 318 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 OR2T3Q8NH03 318 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 STYXQ8WUJ0 223 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 FTHL17Q9BXU8 183 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 PDGFDQ9GZP0 370 aaPredicted RBP11.36□□□□□ -0.59
UBAP2-203ENST00000379235 DNAI2Q9GZS0 605 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 VRTNQ9H8Y1 702 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 TRPC7Q9HCX4 862 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 RNF146Q9NTX7 359 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 RIC8BQ9NVN3 520 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 GMPR2Q9P2T1 348 aaKnown RBP11.36□□□□□ -0.59
UBAP2-203ENST00000379235 TSPAN16Q9UKR8 245 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 AP4E1Q9UPM8 1137 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 TIMM44O43615 452 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 PRKCBP05771 671 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 ASNSP08243 561 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 ARSAP15289 507 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 ETFBP38117 255 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 GRIA3P42263 894 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 EFNA5P52803 228 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 SP2Q02086 613 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 FSTL1Q12841 308 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 NME3Q13232 169 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 TARBP2Q15633 366 aaKnown RBP11.36□□□□□ -0.59
UBAP2-203ENST00000379235 SAMD4BQ5PRF9 694 aaKnown RBP11.36□□□□□ -0.59
UBAP2-203ENST00000379235 LRRC8EQ6NSJ5 796 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 CCDC80Q76M96 950 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 TMEM110Q86TL2 294 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 TMEM135Q86UB9 458 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 DHFR2Q86XF0 187 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 ZC3H7AQ8IWR0 971 aaKnown RBP11.36□□□□□ -0.59
UBAP2-203ENST00000379235 COLGALT2Q8IYK4 626 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 SIX6OS1Q8N1H7 587 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 ANKRD52Q8NB46 1076 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 OR52K1Q8NGK4 314 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 P2RY11Q96G91 374 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 FBXL20Q96IG2 436 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 VPS39Q96JC1 886 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 LRRC40Q9H9A6 602 aa11.36□□□□□ -0.59
UBAP2-203ENST00000379235 GPC6Q9Y625 555 aaPredicted RBP11.36□□□□□ -0.59
UBAP2-203ENST00000379235 SPATA31C2B4DYI2 1134 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 MFSD11O43934 449 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 DLX3O60479 287 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 DDHD2O94830 711 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 CLIC3O95833 236 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 NFICP08651 508 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 GLRBP48167 497 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 PGGT1BP53609 377 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 CSE1LP55060 971 aaKnown RBP11.35□□□□□ -0.59
UBAP2-203ENST00000379235 MLLT10P55197 1068 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 GNA12Q03113 381 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 TRAF2Q12933 501 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 TMEM192Q8IY95 271 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 NETO2Q8NC67 525 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 LPAR1Q92633 364 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 WNK4Q96J92 1243 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 CDHR1Q96JP9 859 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 CNDP2Q96KP4 475 aaKnown RBP11.35□□□□□ -0.59
UBAP2-203ENST00000379235 C11orf84Q9BUA3 381 aaPredicted RBP11.35□□□□□ -0.59
UBAP2-203ENST00000379235 TMEM39BQ9GZU3 492 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 ADAMTS10Q9H324 1103 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 CCM2LQ9NUG4 571 aaPredicted RBP11.35□□□□□ -0.59
UBAP2-203ENST00000379235 GIN1Q9NXP7 522 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 HACD3Q9P035 362 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 ANKRD6Q9Y2G4 727 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 TCAF1Q9Y4C2 921 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 CTDP1Q9Y5B0 961 aaPredicted RBP11.35□□□□□ -0.59
UBAP2-203ENST00000379235 COMMD10Q9Y6G5 202 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 KRBA1A5PL33 1030 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 TRPC5OSA6NMA1 111 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 NRP1O14786 923 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 CNOT3O75175 753 aaKnown RBP11.35□□□□□ -0.59
UBAP2-203ENST00000379235 CPNE6O95741 557 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 CXCL8P10145 99 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 SLC6A3Q01959 620 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 SQLEQ14534 574 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 MAPRE2Q15555 327 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 ATP6AP1Q15904 470 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 HSDL1Q3SXM5 330 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 TSTD2Q5T7W7 516 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 SNRNP48Q6IEG0 339 aaKnown RBP11.35□□□□□ -0.59
UBAP2-203ENST00000379235 FAM45BPQ6NSW5 357 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 PMF1Q6P1K2 205 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 GALNT18Q6P9A2 607 aa11.35□□□□□ -0.59
UBAP2-203ENST00000379235 IGFN1Q86VF2 1251 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms