RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 UBP1Q9NZI7 540 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 SLC7A8Q9UHI5 535 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 CORO1CQ9ULV4 474 aaPredicted RBP18.31■□□□□ 0.52
CD40-201ENST00000372276 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.31■□□□□ 0.52
CD40-201ENST00000372276 AOC2O75106 756 aa18.3■□□□□ 0.52
CD40-201ENST00000372276 TBX10O75333 385 aa18.3■□□□□ 0.52
CD40-201ENST00000372276 RTN3O95197 1032 aaPredicted RBP18.3■□□□□ 0.52
CD40-201ENST00000372276 GLDCP23378 1020 aa18.3■□□□□ 0.52
CD40-201ENST00000372276 SLC26A3P40879 764 aa18.3■□□□□ 0.52
CD40-201ENST00000372276 PAPOLAP51003 745 aaKnown RBP18.3■□□□□ 0.52
CD40-201ENST00000372276 DSC1Q08554 894 aa18.3■□□□□ 0.52
CD40-201ENST00000372276 BTG3Q14201 252 aaPredicted RBP18.3■□□□□ 0.52
CD40-201ENST00000372276 HERC3Q15034 1050 aa18.3■□□□□ 0.52
CD40-201ENST00000372276 TRIM71Q2Q1W2 868 aaKnown RBP18.3■□□□□ 0.52
CD40-201ENST00000372276 SH2D4BQ5SQS7 431 aa18.3■□□□□ 0.52
CD40-201ENST00000372276 CCSAPQ6IQ19 270 aaPredicted RBP18.3■□□□□ 0.52
CD40-201ENST00000372276 PIWIL4Q7Z3Z4 852 aaKnown RBP18.3■□□□□ 0.52
CD40-201ENST00000372276 CTU1Q7Z7A3 348 aaKnown RBP18.3■□□□□ 0.52
CD40-201ENST00000372276 CPSF7Q8N684 471 aaKnown RBP18.3■□□□□ 0.52
CD40-201ENST00000372276 SCG3Q8WXD2 468 aaKnown RBP18.3■□□□□ 0.52
CD40-201ENST00000372276 AZIN2Q96A70 460 aa18.3■□□□□ 0.52
CD40-201ENST00000372276 MIEF2Q96C03 454 aa18.3■□□□□ 0.52
CD40-201ENST00000372276 SERPINI1Q99574 410 aa18.3■□□□□ 0.52
CD40-201ENST00000372276 ZYG11BQ9C0D3 744 aa18.3■□□□□ 0.52
CD40-201ENST00000372276 MRPL46Q9H2W6 279 aaKnown RBP18.3■□□□□ 0.52
CD40-201ENST00000372276 CAB39LQ9H9S4 337 aa18.3■□□□□ 0.52
CD40-201ENST00000372276 TMEM248Q9NWD8 314 aa18.3■□□□□ 0.52
CD40-201ENST00000372276 NMRK1Q9NWW6 199 aa18.3■□□□□ 0.52
CD40-201ENST00000372276 IL37Q9NZH6 218 aa18.3■□□□□ 0.52
CD40-201ENST00000372276 MAGED2Q9UNF1 606 aaPredicted RBP18.3■□□□□ 0.52
CD40-201ENST00000372276 PCDHB5Q9Y5E4 795 aa18.3■□□□□ 0.52
CD40-201ENST00000372276 HS3ST4Q9Y661 456 aa18.3■□□□□ 0.52
CD40-201ENST00000372276 A0A088AWK7 358 aa18.29■□□□□ 0.52
CD40-201ENST00000372276 FAM95CA0A1B0GW59 222 aa18.29■□□□□ 0.52
CD40-201ENST00000372276 OR6C75A6NL08 312 aa18.29■□□□□ 0.52
CD40-201ENST00000372276 TRPC5OSA6NMA1 111 aa18.29■□□□□ 0.52
CD40-201ENST00000372276 KIF1CO43896 1103 aaKnown RBP18.29■□□□□ 0.52
CD40-201ENST00000372276 VAPBO95292 243 aa18.29■□□□□ 0.52
CD40-201ENST00000372276 SLC35E2BP0CK96 405 aa18.29■□□□□ 0.52
CD40-201ENST00000372276 CLCN5P51795 746 aa18.29■□□□□ 0.52
CD40-201ENST00000372276 KPNA1P52294 538 aaPredicted RBP18.29■□□□□ 0.52
CD40-201ENST00000372276 TBX4P57082 545 aa18.29■□□□□ 0.52
CD40-201ENST00000372276 FAM189BP81408 668 aa18.29■□□□□ 0.52
CD40-201ENST00000372276 IRF9Q00978 393 aa18.29■□□□□ 0.52
CD40-201ENST00000372276 KLC1Q07866 573 aa18.29■□□□□ 0.52
CD40-201ENST00000372276 POU6F1Q14863 301 aa18.29■□□□□ 0.52
CD40-201ENST00000372276 PAN2Q504Q3 1202 aaKnown RBP18.29■□□□□ 0.52
CD40-201ENST00000372276 LRRC8EQ6NSJ5 796 aa18.29■□□□□ 0.52
CD40-201ENST00000372276 PGM2L1Q6PCE3 622 aa18.29■□□□□ 0.52
CD40-201ENST00000372276 C16orf89Q6UX73 402 aa18.29■□□□□ 0.52
CD40-201ENST00000372276 SCN4BQ8IWT1 228 aa18.29■□□□□ 0.52
CD40-201ENST00000372276 ZNF781Q8N8C0 355 aa18.29■□□□□ 0.52
CD40-201ENST00000372276 SPATA22Q8NHS9 363 aa18.29■□□□□ 0.52
CD40-201ENST00000372276 RP9Q8TA86 221 aaKnown RBP18.29■□□□□ 0.52
CD40-201ENST00000372276 PEX13Q92968 403 aa18.29■□□□□ 0.52
CD40-201ENST00000372276 OXCT2Q9BYC2 517 aaPredicted RBP18.29■□□□□ 0.52
CD40-201ENST00000372276 VCXQ9H320 206 aa18.29■□□□□ 0.52
CD40-201ENST00000372276 SFMBT1Q9UHJ3 866 aa18.29■□□□□ 0.52
CD40-201ENST00000372276 PRPF19Q9UMS4 504 aaKnown RBP18.29■□□□□ 0.52
CD40-201ENST00000372276 A0A1W2PQH9 124 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 RGSL1A5PLK6 1076 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 HLA-DQB2P05538 268 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 COX4I1P13073 169 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 ANPEPP15144 967 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 GRIA4P48058 902 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 FLT3LGP49771 235 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 XIAPP98170 497 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 KLF10Q13118 480 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 ITGA7Q13683 1181 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 GSTA3Q16772 222 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 FAM83EQ2M2I3 478 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 SLC39A12Q504Y0 691 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 NOMO2Q5JPE7 1267 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 NEPROQ6NW34 567 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 KLC3Q6P597 504 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 RNF180Q86T96 592 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 IMP4Q96G21 291 aaKnown RBP18.28■□□□□ 0.52
CD40-201ENST00000372276 MRGPRX2Q96LB1 330 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 FAM193BQ96PV7 902 aaPredicted RBP18.28■□□□□ 0.52
CD40-201ENST00000372276 PANX3Q96QZ0 392 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 TMEM209Q96SK2 561 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 ZIC5Q96T25 663 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 FTHL17Q9BXU8 183 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 ATP13A1Q9HD20 1204 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 NCKIPSDQ9NZQ3 722 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 FBXO5Q9UKT4 447 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 CASP8AP2Q9UKL3 1982 aa18.28■□□□□ 0.52
CD40-201ENST00000372276 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.27■□□□□ 0.52
CD40-201ENST00000372276 TARM1B6A8C7 271 aa18.27■□□□□ 0.52
CD40-201ENST00000372276 MT-CYBP00156 380 aaPredicted RBP18.27■□□□□ 0.52
CD40-201ENST00000372276 RBP1P09455 135 aa18.27■□□□□ 0.52
CD40-201ENST00000372276 ATP5F1P24539 256 aaPredicted RBP18.27■□□□□ 0.52
CD40-201ENST00000372276 SERPINH1P50454 418 aaKnown RBP18.27■□□□□ 0.52
CD40-201ENST00000372276 WNT3AP56704 352 aa18.27■□□□□ 0.52
CD40-201ENST00000372276 SATB1Q01826 763 aa18.27■□□□□ 0.52
CD40-201ENST00000372276 LBRQ14739 615 aaKnown RBP18.27■□□□□ 0.52
CD40-201ENST00000372276 DLG2Q15700 870 aa18.27■□□□□ 0.52
CD40-201ENST00000372276 MARC1Q5VT66 337 aa18.27■□□□□ 0.52
CD40-201ENST00000372276 AGAP9Q5VTM2 703 aa18.27■□□□□ 0.52
CD40-201ENST00000372276 ESRP1Q6NXG1 681 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms