RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 TSC1Q92574 1164 aa18.05■□□□□ 0.48
HDDC3-201ENST00000330334 VOPP1Q96AW1 172 aa18.05■□□□□ 0.48
HDDC3-201ENST00000330334 IFT43Q96FT9 208 aa18.05■□□□□ 0.48
HDDC3-201ENST00000330334 EIF3CQ99613 913 aaKnown RBP18.05■□□□□ 0.48
HDDC3-201ENST00000330334 OSBPL1AQ9BXW6 950 aa18.05■□□□□ 0.48
HDDC3-201ENST00000330334 CATSPERBQ9H7T0 1116 aa18.05■□□□□ 0.48
HDDC3-201ENST00000330334 ACTL7AQ9Y615 435 aa18.05■□□□□ 0.48
HDDC3-201ENST00000330334 PKD1L2Q7Z442 2459 aa18.04■□□□□ 0.48
HDDC3-201ENST00000330334 A0A1B0GTH6 734 aa18.04■□□□□ 0.48
HDDC3-201ENST00000330334 ENC1O14682 589 aa18.04■□□□□ 0.48
HDDC3-201ENST00000330334 FGF10O15520 208 aaPredicted RBP18.04■□□□□ 0.48
HDDC3-201ENST00000330334 TSPAN6O43657 245 aa18.04■□□□□ 0.48
HDDC3-201ENST00000330334 PRLRP16471 622 aa18.04■□□□□ 0.48
HDDC3-201ENST00000330334 PRKCIP41743 596 aa18.04■□□□□ 0.48
HDDC3-201ENST00000330334 BNIP3Q12983 259 aa18.04■□□□□ 0.48
HDDC3-201ENST00000330334 MYLK3Q32MK0 819 aa18.04■□□□□ 0.48
HDDC3-201ENST00000330334 PARP15Q460N3 678 aa18.04■□□□□ 0.48
HDDC3-201ENST00000330334 ZNF805Q5CZA5 627 aa18.04■□□□□ 0.48
HDDC3-201ENST00000330334 PLEKHA7Q6IQ23 1121 aa18.04■□□□□ 0.48
HDDC3-201ENST00000330334 TMPRSS12Q86WS5 348 aa18.04■□□□□ 0.48
HDDC3-201ENST00000330334 PYROXD2Q8N2H3 581 aa18.04■□□□□ 0.48
HDDC3-201ENST00000330334 ASB12Q8WXK4 309 aa18.04■□□□□ 0.48
HDDC3-201ENST00000330334 CNDP2Q96KP4 475 aaKnown RBP18.04■□□□□ 0.48
HDDC3-201ENST00000330334 LENG8Q96PV6 779 aaPredicted RBP18.04■□□□□ 0.48
HDDC3-201ENST00000330334 SLC17A9Q9BYT1 436 aa18.04■□□□□ 0.48
HDDC3-201ENST00000330334 TM6SF2Q9BZW4 377 aa18.04■□□□□ 0.48
HDDC3-201ENST00000330334 TAS2R14Q9NYV8 317 aa18.04■□□□□ 0.48
HDDC3-201ENST00000330334 DKK4Q9UBT3 224 aa18.04■□□□□ 0.48
HDDC3-201ENST00000330334 MFHAS1Q9Y4C4 1052 aa18.04■□□□□ 0.48
HDDC3-201ENST00000330334 KNTC1P50748 2209 aa18.04■□□□□ 0.48
HDDC3-201ENST00000330334 DSPP15924 2871 aaKnown RBP18.04■□□□□ 0.48
HDDC3-201ENST00000330334 LRRC53A6NM62 1247 aa18.03■□□□□ 0.48
HDDC3-201ENST00000330334 GOLGA8CPA6NN73 597 aa18.03■□□□□ 0.48
HDDC3-201ENST00000330334 C16orf96A6NNT2 1141 aa18.03■□□□□ 0.48
HDDC3-201ENST00000330334 THEGLP0DJG4 465 aa18.03■□□□□ 0.48
HDDC3-201ENST00000330334 ILKQ13418 452 aa18.03■□□□□ 0.48
HDDC3-201ENST00000330334 SEL1L3Q68CR1 1132 aa18.03■□□□□ 0.48
HDDC3-201ENST00000330334 PARS2Q7L3T8 475 aaKnown RBP18.03■□□□□ 0.48
HDDC3-201ENST00000330334 TMC6Q7Z403 805 aa18.03■□□□□ 0.48
HDDC3-201ENST00000330334 PROSER1Q86XN7 944 aa18.03■□□□□ 0.48
HDDC3-201ENST00000330334 EID2Q8N6I1 236 aa18.03■□□□□ 0.48
HDDC3-201ENST00000330334 FNIP1Q8TF40 1166 aa18.03■□□□□ 0.48
HDDC3-201ENST00000330334 ARHGEF26Q96DR7 871 aa18.03■□□□□ 0.48
HDDC3-201ENST00000330334 FUCA2Q9BTY2 467 aa18.03■□□□□ 0.48
HDDC3-201ENST00000330334 C1QTNF2Q9BXJ5 285 aa18.03■□□□□ 0.48
HDDC3-201ENST00000330334 TTYH3Q9C0H2 523 aa18.03■□□□□ 0.48
HDDC3-201ENST00000330334 ZDHHC6Q9H6R6 413 aa18.03■□□□□ 0.48
HDDC3-201ENST00000330334 GPR27Q9NS67 375 aa18.03■□□□□ 0.48
HDDC3-201ENST00000330334 CA5BQ9Y2D0 317 aa18.03■□□□□ 0.48
HDDC3-201ENST00000330334 TAF4O00268 1085 aa18.02■□□□□ 0.48
HDDC3-201ENST00000330334 BUB1O43683 1085 aa18.02■□□□□ 0.48
HDDC3-201ENST00000330334 OGDHQ02218 1023 aa18.02■□□□□ 0.48
HDDC3-201ENST00000330334 RAD51Q06609 339 aa18.02■□□□□ 0.48
HDDC3-201ENST00000330334 SERINC3Q13530 473 aa18.02■□□□□ 0.48
HDDC3-201ENST00000330334 NR1I3Q14994 352 aa18.02■□□□□ 0.48
HDDC3-201ENST00000330334 IQCB1Q15051 598 aa18.02■□□□□ 0.48
HDDC3-201ENST00000330334 ASIC2Q16515 512 aa18.02■□□□□ 0.48
HDDC3-201ENST00000330334 FIGNQ5HY92 759 aa18.02■□□□□ 0.48
HDDC3-201ENST00000330334 CAVIN1Q6NZI2 390 aaKnown RBP18.02■□□□□ 0.48
HDDC3-201ENST00000330334 GCNT7Q6ZNI0 430 aa18.02■□□□□ 0.48
HDDC3-201ENST00000330334 RYBPQ8N488 228 aaPredicted RBP18.02■□□□□ 0.48
HDDC3-201ENST00000330334 KLK6Q92876 244 aa18.02■□□□□ 0.48
HDDC3-201ENST00000330334 BMFQ96LC9 184 aa18.02■□□□□ 0.48
HDDC3-201ENST00000330334 GDAP1L1Q96MZ0 367 aa18.02■□□□□ 0.48
HDDC3-201ENST00000330334 NAP1L5Q96NT1 182 aaPredicted RBP18.02■□□□□ 0.48
HDDC3-201ENST00000330334 HAUS4Q9H6D7 363 aa18.02■□□□□ 0.48
HDDC3-201ENST00000330334 CCDC86Q9H6F5 360 aaKnown RBP18.02■□□□□ 0.48
HDDC3-201ENST00000330334 ARID1BQ8NFD5 2236 aaPredicted RBP18.02■□□□□ 0.47
HDDC3-201ENST00000330334 PLXNB3Q9ULL4 1909 aa18.02■□□□□ 0.47
HDDC3-201ENST00000330334 TMEM191CA6NGB0 347 aa18.01■□□□□ 0.47
HDDC3-201ENST00000330334 A6NNZ2 444 aa18.01■□□□□ 0.47
HDDC3-201ENST00000330334 RASA4BC9J798 803 aa18.01■□□□□ 0.47
HDDC3-201ENST00000330334 KRIT1O00522 736 aa18.01■□□□□ 0.47
HDDC3-201ENST00000330334 AREL1O15033 823 aa18.01■□□□□ 0.47
HDDC3-201ENST00000330334 RASA4O43374 803 aa18.01■□□□□ 0.47
HDDC3-201ENST00000330334 CREB3O43889 395 aa18.01■□□□□ 0.47
HDDC3-201ENST00000330334 RFPL3O75679 317 aa18.01■□□□□ 0.47
HDDC3-201ENST00000330334 TMCC1O94876 653 aa18.01■□□□□ 0.47
HDDC3-201ENST00000330334 PAK4O96013 591 aaPredicted RBP18.01■□□□□ 0.47
HDDC3-201ENST00000330334 FTLP02792 175 aaPredicted RBP18.01■□□□□ 0.47
HDDC3-201ENST00000330334 CKMT2P17540 419 aa18.01■□□□□ 0.47
HDDC3-201ENST00000330334 ACADVLP49748 655 aa18.01■□□□□ 0.47
HDDC3-201ENST00000330334 NDST2P52849 883 aa18.01■□□□□ 0.47
HDDC3-201ENST00000330334 ZNF211Q13398 564 aaPredicted RBP18.01■□□□□ 0.47
HDDC3-201ENST00000330334 CAMK2BQ13554 666 aa18.01■□□□□ 0.47
HDDC3-201ENST00000330334 FGL2Q14314 439 aa18.01■□□□□ 0.47
HDDC3-201ENST00000330334 DHRS13Q6UX07 377 aa18.01■□□□□ 0.47
HDDC3-201ENST00000330334 ZNF571Q7Z3V5 609 aaPredicted RBP18.01■□□□□ 0.47
HDDC3-201ENST00000330334 PSTKQ8IV42 348 aaKnown RBP18.01■□□□□ 0.47
HDDC3-201ENST00000330334 SLC25A45Q8N413 288 aa18.01■□□□□ 0.47
HDDC3-201ENST00000330334 OR13H1Q8NG92 308 aa18.01■□□□□ 0.47
HDDC3-201ENST00000330334 HCAR2Q8TDS4 363 aa18.01■□□□□ 0.47
HDDC3-201ENST00000330334 HMCESQ96FZ2 354 aa18.01■□□□□ 0.47
HDDC3-201ENST00000330334 NCAPGQ9BPX3 1015 aa18.01■□□□□ 0.47
HDDC3-201ENST00000330334 CPEB1Q9BZB8 566 aaKnown RBP18.01■□□□□ 0.47
HDDC3-201ENST00000330334 DKK3Q9UBP4 350 aa18.01■□□□□ 0.47
HDDC3-201ENST00000330334 DOCK9Q9BZ29 2069 aa18.01■□□□□ 0.47
HDDC3-201ENST00000330334 FAM208BQ5VWN6 2430 aa18.01■□□□□ 0.47
HDDC3-201ENST00000330334 PTPRBP23467 1997 aa18■□□□□ 0.47
HDDC3-201ENST00000330334 DGKAP23743 735 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms