RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 CBX4O00257 560 aa18.39■□□□□ 0.53
VIM-201ENST00000224237 GLDCP23378 1020 aa18.39■□□□□ 0.53
VIM-201ENST00000224237 GBP2P32456 591 aaPredicted RBP18.39■□□□□ 0.53
VIM-201ENST00000224237 SERPINB9P50453 376 aa18.39■□□□□ 0.53
VIM-201ENST00000224237 MGAT5Q09328 741 aa18.39■□□□□ 0.53
VIM-201ENST00000224237 ZSCAN26Q16670 478 aa18.39■□□□□ 0.53
VIM-201ENST00000224237 ANKRD20A4Q4UJ75 823 aa18.39■□□□□ 0.53
VIM-201ENST00000224237 MFN1Q8IWA4 741 aa18.39■□□□□ 0.53
VIM-201ENST00000224237 DDI1Q8WTU0 396 aa18.39■□□□□ 0.53
VIM-201ENST00000224237 FCRL3Q96P31 734 aaPredicted RBP18.39■□□□□ 0.53
VIM-201ENST00000224237 SEMA3CQ99985 751 aa18.39■□□□□ 0.53
VIM-201ENST00000224237 KIF9Q9HAQ2 790 aa18.39■□□□□ 0.53
VIM-201ENST00000224237 SSU72Q9NP77 194 aaKnown RBP18.39■□□□□ 0.53
VIM-201ENST00000224237 CHRAC1Q9NRG0 131 aa18.39■□□□□ 0.53
VIM-201ENST00000224237 SMG5Q9UPR3 1016 aaKnown RBP18.39■□□□□ 0.53
VIM-201ENST00000224237 ZCWPW2A0A1B0GU75 182 aa18.38■□□□□ 0.53
VIM-201ENST00000224237 A0A1W2PPM1 405 aa18.38■□□□□ 0.53
VIM-201ENST00000224237 FAM47DPA6NHR8 397 aa18.38■□□□□ 0.53
VIM-201ENST00000224237 MUSKO15146 869 aa18.38■□□□□ 0.53
VIM-201ENST00000224237 PRPF4O43172 522 aaKnown RBP eCLIP18.38■□□□□ 0.53
VIM-201ENST00000224237 KRT38O76015 456 aa18.38■□□□□ 0.53
VIM-201ENST00000224237 KRT4P19013 534 aa18.38■□□□□ 0.53
VIM-201ENST00000224237 SLC18A1P54219 525 aa18.38■□□□□ 0.53
VIM-201ENST00000224237 SLC14A2Q15849 920 aa18.38■□□□□ 0.53
VIM-201ENST00000224237 FSCBQ5H9T9 825 aa18.38■□□□□ 0.53
VIM-201ENST00000224237 PRSS36Q5K4E3 855 aa18.38■□□□□ 0.53
VIM-201ENST00000224237 CES3Q6UWW8 571 aa18.38■□□□□ 0.53
VIM-201ENST00000224237 UNC5BQ8IZJ1 945 aa18.38■□□□□ 0.53
VIM-201ENST00000224237 PPHLN1Q8NEY8 458 aaKnown RBP18.38■□□□□ 0.53
VIM-201ENST00000224237 ALKBH8Q96BT7 664 aaKnown RBP18.38■□□□□ 0.53
VIM-201ENST00000224237 MTBPQ96DY7 904 aa18.38■□□□□ 0.53
VIM-201ENST00000224237 MFSD3Q96ES6 412 aa18.38■□□□□ 0.53
VIM-201ENST00000224237 LMAN2LQ9H0V9 348 aa18.38■□□□□ 0.53
VIM-201ENST00000224237 MRM3Q9HC36 420 aaKnown RBP18.38■□□□□ 0.53
VIM-201ENST00000224237 NKIRAS1Q9NYS0 192 aa18.38■□□□□ 0.53
VIM-201ENST00000224237 ZFATQ9P243 1243 aa18.38■□□□□ 0.53
VIM-201ENST00000224237 CCL26Q9Y258 94 aa18.38■□□□□ 0.53
VIM-201ENST00000224237 CCDC195A0A1B0GUA6 201 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 ZNF197O14709 1029 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 SNRPAP09012 282 aaKnown RBP18.37■□□□□ 0.53
VIM-201ENST00000224237 CNTFP26441 200 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 ARF5P84085 180 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 POU6F1Q14863 301 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 PKN3Q6P5Z2 889 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 GRASPQ7Z6J2 395 aaPredicted RBP18.37■□□□□ 0.53
VIM-201ENST00000224237 RASSF3Q86WH2 238 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 C4orf33Q8N1A6 199 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 ATXN2LQ8WWM7 1075 aaKnown RBP18.37■□□□□ 0.53
VIM-201ENST00000224237 FEM1AQ9BSK4 669 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 TDP1Q9NUW8 608 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 VPS28Q9UK41 221 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 MYO9BQ13459 2157 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 REV3LO60673 3130 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.37■□□□□ 0.53
VIM-201ENST00000224237 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.37■□□□□ 0.53
VIM-201ENST00000224237 RFXAPO00287 272 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 FAM155BO75949 473 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 MT-ND3P03897 115 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 CYBBP04839 570 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 SERPINF2P08697 491 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 MZF1P28698 734 aaPredicted RBP18.37■□□□□ 0.53
VIM-201ENST00000224237 CSKP41240 450 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 NRIP1P48552 1158 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 SLC1A5Q15758 541 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 KDELC2Q7Z4H8 507 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 C12orf76Q8N812 135 aaPredicted RBP18.37■□□□□ 0.53
VIM-201ENST00000224237 DCAF4L2Q8NA75 395 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 RIN3Q8TB24 985 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 USP13Q92995 863 aaPredicted RBP18.37■□□□□ 0.53
VIM-201ENST00000224237 BHMTQ93088 406 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 ZNF707Q96C28 371 aaPredicted RBP18.37■□□□□ 0.53
VIM-201ENST00000224237 ACTL7AQ9Y615 435 aa18.37■□□□□ 0.53
VIM-201ENST00000224237 LOC285095A0A1B0GVY8 99 aa18.36■□□□□ 0.53
VIM-201ENST00000224237 UGT1A9O60656 530 aa18.36■□□□□ 0.53
VIM-201ENST00000224237 ERVK-10P10266 1014 aa18.36■□□□□ 0.53
VIM-201ENST00000224237 CHRNA4P43681 627 aa18.36■□□□□ 0.53
VIM-201ENST00000224237 HNRNPH2P55795 449 aaKnown RBP18.36■□□□□ 0.53
VIM-201ENST00000224237 RNF43Q68DV7 783 aa18.36■□□□□ 0.53
VIM-201ENST00000224237 TPGS1Q6ZTW0 290 aa18.36■□□□□ 0.53
VIM-201ENST00000224237 ANKRD42Q8N9B4 389 aa18.36■□□□□ 0.53
VIM-201ENST00000224237 WFDC5Q8TCV5 224 aa18.36■□□□□ 0.53
VIM-201ENST00000224237 SGSM3Q96HU1 749 aa18.36■□□□□ 0.53
VIM-201ENST00000224237 EPN3Q9H201 632 aa18.36■□□□□ 0.53
VIM-201ENST00000224237 TLE6Q9H808 572 aa18.36■□□□□ 0.53
VIM-201ENST00000224237 UGT1A7Q9HAW7 530 aa18.36■□□□□ 0.53
VIM-201ENST00000224237 UGT1A10Q9HAW8 530 aa18.36■□□□□ 0.53
VIM-201ENST00000224237 UGT1A8Q9HAW9 530 aa18.36■□□□□ 0.53
VIM-201ENST00000224237 TXNDC16Q9P2K2 825 aa18.36■□□□□ 0.53
VIM-201ENST00000224237 PRKAG3Q9UGI9 489 aa18.36■□□□□ 0.53
VIM-201ENST00000224237 MSRAQ9UJ68 235 aa18.36■□□□□ 0.53
VIM-201ENST00000224237 TCAF1Q9Y4C2 921 aa18.36■□□□□ 0.53
VIM-201ENST00000224237 OR51B4Q9Y5P0 310 aa18.36■□□□□ 0.53
VIM-201ENST00000224237 TTC24A2A3L6 582 aaPredicted RBP18.35■□□□□ 0.53
VIM-201ENST00000224237 TRIM49D1C9J1S8 452 aa18.35■□□□□ 0.53
VIM-201ENST00000224237 TYROBPO43914 113 aa18.35■□□□□ 0.53
VIM-201ENST00000224237 SPAG7O75391 227 aa18.35■□□□□ 0.53
VIM-201ENST00000224237 ZMPSTE24O75844 475 aa18.35■□□□□ 0.53
VIM-201ENST00000224237 EPOP01588 193 aa18.35■□□□□ 0.53
VIM-201ENST00000224237 CES1P23141 567 aa18.35■□□□□ 0.53
VIM-201ENST00000224237 ADRA1DP25100 572 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms