RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 PRKD1Q15139 912 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-234ENST00000642041 PRSS36Q5K4E3 855 aa17.57■□□□□ 0.4
PHGDH-234ENST00000642041 TCEAL6Q6IPX3 200 aa17.57■□□□□ 0.4
PHGDH-234ENST00000642041 CYS1Q717R9 158 aa17.57■□□□□ 0.4
PHGDH-234ENST00000642041 PYROXD1Q8WU10 500 aa17.57■□□□□ 0.4
PHGDH-234ENST00000642041 CPT1BQ92523 772 aa17.57■□□□□ 0.4
PHGDH-234ENST00000642041 TCEAL3Q969E4 200 aa17.57■□□□□ 0.4
PHGDH-234ENST00000642041 CDC42EP4Q9H3Q1 356 aaKnown RBP17.57■□□□□ 0.4
PHGDH-234ENST00000642041 ETNK2Q9NVF9 386 aa17.57■□□□□ 0.4
PHGDH-234ENST00000642041 MARCH2Q9P0N8 246 aa17.57■□□□□ 0.4
PHGDH-234ENST00000642041 COX16Q9P0S2 106 aa17.57■□□□□ 0.4
PHGDH-234ENST00000642041 SENP1Q9P0U3 644 aa17.57■□□□□ 0.4
PHGDH-234ENST00000642041 VPS18Q9P253 973 aa17.57■□□□□ 0.4
PHGDH-234ENST00000642041 SAE1Q9UBE0 346 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-234ENST00000642041 ZMYM5Q9UJ78 669 aa17.57■□□□□ 0.4
PHGDH-234ENST00000642041 ARNTLO00327 626 aa17.56■□□□□ 0.4
PHGDH-234ENST00000642041 TRDMT1O14717 391 aaKnown RBP17.56■□□□□ 0.4
PHGDH-234ENST00000642041 CDH16O75309 829 aa17.56■□□□□ 0.4
PHGDH-234ENST00000642041 LRIG2O94898 1065 aa17.56■□□□□ 0.4
PHGDH-234ENST00000642041 SLC11A2P49281 568 aa17.56■□□□□ 0.4
PHGDH-234ENST00000642041 YBEYP58557 167 aaPredicted RBP17.56■□□□□ 0.4
PHGDH-234ENST00000642041 CBX1P83916 185 aa17.56■□□□□ 0.4
PHGDH-234ENST00000642041 GALNT2Q10471 571 aa17.56■□□□□ 0.4
PHGDH-234ENST00000642041 SEMA5AQ13591 1074 aa17.56■□□□□ 0.4
PHGDH-234ENST00000642041 UAP1Q16222 522 aaPredicted RBP17.56■□□□□ 0.4
PHGDH-234ENST00000642041 KLHL38Q2WGJ6 581 aa17.56■□□□□ 0.4
PHGDH-234ENST00000642041 KRT71Q3SY84 523 aa17.56■□□□□ 0.4
PHGDH-234ENST00000642041 HECTD3Q5T447 861 aa17.56■□□□□ 0.4
PHGDH-234ENST00000642041 PALM2Q8IXS6 379 aa17.56■□□□□ 0.4
PHGDH-234ENST00000642041 TTC9BQ8N6N2 239 aa17.56■□□□□ 0.4
PHGDH-234ENST00000642041 SMARCD2Q92925 531 aa17.56■□□□□ 0.4
PHGDH-234ENST00000642041 PLD4Q96BZ4 506 aa17.56■□□□□ 0.4
PHGDH-234ENST00000642041 C8orf33Q9H7E9 229 aaPredicted RBP17.56■□□□□ 0.4
PHGDH-234ENST00000642041 RAB6BQ9NRW1 208 aa17.56■□□□□ 0.4
PHGDH-234ENST00000642041 SLC24A2Q9UI40 661 aa17.56■□□□□ 0.4
PHGDH-234ENST00000642041 XPO7Q9UIA9 1087 aaKnown RBP17.56■□□□□ 0.4
PHGDH-234ENST00000642041 SLC27A5Q9Y2P5 690 aa17.56■□□□□ 0.4
PHGDH-234ENST00000642041 MSRB2Q9Y3D2 182 aa17.56■□□□□ 0.4
PHGDH-234ENST00000642041 INSL5Q9Y5Q6 135 aa17.56■□□□□ 0.4
PHGDH-234ENST00000642041 NAV2Q8IVL1 2488 aa17.55■□□□□ 0.4
PHGDH-234ENST00000642041 PCNX2A6NKB5 2137 aa17.55■□□□□ 0.4
PHGDH-234ENST00000642041 ZNF197O14709 1029 aa17.55■□□□□ 0.4
PHGDH-234ENST00000642041 TP73O15350 636 aa17.55■□□□□ 0.4
PHGDH-234ENST00000642041 RGS16O15492 202 aaPredicted RBP17.55■□□□□ 0.4
PHGDH-234ENST00000642041 PAGE1O75459 146 aa17.55■□□□□ 0.4
PHGDH-234ENST00000642041 RHOQP17081 205 aa17.55■□□□□ 0.4
PHGDH-234ENST00000642041 HARS2P49590 506 aaKnown RBP17.55■□□□□ 0.4
PHGDH-234ENST00000642041 GBE1Q04446 702 aa17.55■□□□□ 0.4
PHGDH-234ENST00000642041 ZNF844Q08AG5 666 aa17.55■□□□□ 0.4
PHGDH-234ENST00000642041 IFRD2Q12894 506 aaPredicted RBP17.55■□□□□ 0.4
PHGDH-234ENST00000642041 CCDC38Q502W7 563 aa17.55■□□□□ 0.4
PHGDH-234ENST00000642041 C10orf120Q5SQS8 335 aa17.55■□□□□ 0.4
PHGDH-234ENST00000642041 TDRPQ86YL5 185 aa17.55■□□□□ 0.4
PHGDH-234ENST00000642041 MFSD6LQ8IWD5 586 aa17.55■□□□□ 0.4
PHGDH-234ENST00000642041 ELMOD1Q8N336 334 aa17.55■□□□□ 0.4
PHGDH-234ENST00000642041 SYNPOQ8N3V7 929 aa17.55■□□□□ 0.4
PHGDH-234ENST00000642041 CCNYQ8ND76 341 aa17.55■□□□□ 0.4
PHGDH-234ENST00000642041 CSGALNACT1Q8TDX6 532 aa17.55■□□□□ 0.4
PHGDH-234ENST00000642041 NSMCE1Q8WV22 266 aa17.55■□□□□ 0.4
PHGDH-234ENST00000642041 TCEAL4Q96EI5 215 aa17.55■□□□□ 0.4
PHGDH-234ENST00000642041 FCRL2Q96LA5 508 aaPredicted RBP17.55■□□□□ 0.4
PHGDH-234ENST00000642041 NACA2Q9H009 215 aa17.55■□□□□ 0.4
PHGDH-234ENST00000642041 CRISPLD1Q9H336 500 aa17.55■□□□□ 0.4
PHGDH-234ENST00000642041 GMIPQ9P107 970 aa17.55■□□□□ 0.4
PHGDH-234ENST00000642041 ADAM21Q9UKJ8 722 aa17.55■□□□□ 0.4
PHGDH-234ENST00000642041 GPSM3Q9Y4H4 160 aa17.55■□□□□ 0.4
PHGDH-234ENST00000642041 ACTL7BQ9Y614 415 aa17.55■□□□□ 0.4
PHGDH-234ENST00000642041 MAGEB16A2A368 324 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 TLR5O60602 858 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 SEC24AO95486 1093 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 LRG1P02750 347 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 GARSP41250 739 aaKnown RBP17.54■□□□□ 0.4
PHGDH-234ENST00000642041 MAPKAPK2P49137 400 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 LMAN1P49257 510 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 GPR15P49685 360 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 AP1B1Q10567 949 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 KCNJ11Q14654 390 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 RAB6CQ53S08 254 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 ANKRD20A2Q5SQ80 823 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 LGSNQ5TDP6 509 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 ANKRD20A1Q5TYW2 823 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 MANEALQ5VSG8 457 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 TTC39BQ5VTQ0 682 aaPredicted RBP17.54■□□□□ 0.4
PHGDH-234ENST00000642041 ANKRD20A3Q5VUR7 823 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 ZNF449Q6P9G9 518 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 NPNTQ6UXI9 565 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 LINC00523Q86TU6 105 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 PDZD3Q86UT5 571 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 CCDC13Q8IYE1 715 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 RTL3Q8N8U3 475 aaKnown RBP17.54■□□□□ 0.4
PHGDH-234ENST00000642041 ZNF512Q96ME7 567 aaPredicted RBP17.54■□□□□ 0.4
PHGDH-234ENST00000642041 FAM118BQ9BPY3 351 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 ZYG11BQ9C0D3 744 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 RAB6CQ9H0N0 254 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 NMUR1Q9HB89 426 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 TRPV4Q9HBA0 871 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 SAYSD1Q9NPB0 183 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 CALCOCO1Q9P1Z2 691 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 ZNF510Q9Y2H8 683 aa17.54■□□□□ 0.4
PHGDH-234ENST00000642041 AAR2Q9Y312 384 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms