RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 NKX3-2P78367 333 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 TMPRSS15P98073 1019 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 CBLBQ13191 982 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 BTG3Q14201 252 aaPredicted RBP11.74□□□□□ -0.53
USP35-207ENST00000530546 PDK3Q15120 406 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 C1orf146Q5VVC0 180 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 KLHDC10Q6PID8 442 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 RBM44Q6ZP01 1051 aaKnown RBP11.74□□□□□ -0.53
USP35-207ENST00000530546 OTOP3Q7RTS5 596 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 DNAJC1Q96KC8 554 aaKnown RBP11.74□□□□□ -0.53
USP35-207ENST00000530546 FCRL3Q96P31 734 aaPredicted RBP11.74□□□□□ -0.53
USP35-207ENST00000530546 FBXO6Q9NRD1 293 aaPredicted RBP11.74□□□□□ -0.53
USP35-207ENST00000530546 TXNDC16Q9P2K2 825 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 THEGQ9P2T0 379 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 PLA2G4CQ9UP65 541 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.74□□□□□ -0.53
USP35-207ENST00000530546 A0A1W2PQH9 124 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 PAGE1O75459 146 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 TRPA1O75762 1119 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 MYCP01106 439 aaPredicted RBP11.74□□□□□ -0.53
USP35-207ENST00000530546 GRK4P32298 578 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 HCAR3P49019 387 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 ACADVLP49748 655 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 SERPINB9P50453 376 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 PDE1BQ01064 536 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 GALNT2Q10471 571 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 TBL3Q12788 808 aaKnown RBP11.74□□□□□ -0.53
USP35-207ENST00000530546 MAPRE1Q15691 268 aaKnown RBP11.74□□□□□ -0.53
USP35-207ENST00000530546 CHI3L2Q15782 390 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 STEAP4Q687X5 459 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 UGT2A3Q6UWM9 527 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 ZCCHC23Q6ZST2 131 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 SCD5Q86SK9 330 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 NUDCD3Q8IVD9 361 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 CROCCP3Q8IVE0 287 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 FNDC8Q8TC99 324 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 RAET1EQ8TD07 263 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 LINC01599Q8WXQ3 324 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 MTBPQ96DY7 904 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 UROC1Q96N76 676 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 FAM193BQ96PV7 902 aaPredicted RBP11.74□□□□□ -0.53
USP35-207ENST00000530546 MLPHQ9BV36 600 aaPredicted RBP11.74□□□□□ -0.53
USP35-207ENST00000530546 KCNK13Q9HB14 408 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 FAIMQ9NVQ4 179 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 VANGL2Q9ULK5 521 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 PPM1HQ9ULR3 514 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 TTC3P53804 2025 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 GOLGA8TH3BQL2 631 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 FCHO1O14526 889 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 TPP1O14773 563 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 IRAK2O43187 625 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 SUPT3HO75486 399 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 SOAT2O75908 522 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 AP2A1O95782 977 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 POLBP06746 335 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 DLDP09622 509 aaKnown RBP11.73□□□□□ -0.53
USP35-207ENST00000530546 SMIM18P0DKX4 95 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 KITP10721 976 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 PORP16435 677 aaPredicted RBP11.73□□□□□ -0.53
USP35-207ENST00000530546 CST5P28325 142 aaPredicted RBP11.73□□□□□ -0.53
USP35-207ENST00000530546 TBCCQ15814 346 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 MMEL1Q495T6 779 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 TEX44Q53QW1 395 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 NOMO2Q5JPE7 1267 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 BORAQ6PGQ7 559 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 OXCT2Q9BYC2 517 aaPredicted RBP11.73□□□□□ -0.53
USP35-207ENST00000530546 C1orf21Q9H246 121 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 S100A14Q9HCY8 104 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 RGS18Q9NS28 235 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 BFARQ9NZS9 450 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 MARCOQ9UEW3 520 aaPredicted RBP11.73□□□□□ -0.53
USP35-207ENST00000530546 PCDHB8Q9UN66 801 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 NCAM2O15394 837 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 TADA2AO75478 443 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 CLPTM1O96005 669 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 VARSP26640 1264 aaKnown RBP11.73□□□□□ -0.53
USP35-207ENST00000530546 NUMBP49757 651 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 OXCT1P55809 520 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 NIPAL4Q0D2K0 466 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 PPM1JQ5JR12 505 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 FAM26DQ5JW98 314 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 SLC24A5Q71RS6 500 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 KDELC2Q7Z4H8 507 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 CHSY1Q86X52 802 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 SPATA22Q8NHS9 363 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 C17orf50Q8WW18 174 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 HDAC11Q96DB2 347 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 MFSD3Q96ES6 412 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 FCRL2Q96LA5 508 aaPredicted RBP11.73□□□□□ -0.53
USP35-207ENST00000530546 RBM38Q9H0Z9 239 aaKnown RBP11.73□□□□□ -0.53
USP35-207ENST00000530546 GBA3Q9H227 469 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 MPP6Q9NZW5 540 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 SLC7A8Q9UHI5 535 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 FAM237BA0A1B0GVD1 139 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 CAPN14A8MX76 684 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 PEX1O43933 1283 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 GATMP50440 423 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 GALK1P51570 392 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 BST1Q10588 318 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 SPIDRQ14159 915 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms