RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 IRGQQ8WZA9 623 aa14.17□□□□□ -0.14
NKX3-1-202ENST00000523261 PMEPA1Q969W9 287 aa14.17□□□□□ -0.14
NKX3-1-202ENST00000523261 FEM1CQ96JP0 617 aa14.17□□□□□ -0.14
NKX3-1-202ENST00000523261 C1QTNF2Q9BXJ5 285 aa14.17□□□□□ -0.14
NKX3-1-202ENST00000523261 SLC39A2Q9NP94 309 aa14.17□□□□□ -0.14
NKX3-1-202ENST00000523261 TP53TG5Q9Y2B4 290 aa14.17□□□□□ -0.14
NKX3-1-202ENST00000523261 FARP1Q9Y4F1 1045 aaPredicted RBP14.17□□□□□ -0.14
NKX3-1-202ENST00000523261 WIPF3A6NGB9 483 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 SPTLC2O15270 562 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 DUX1O43812 170 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 CNTN5O94779 1100 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 DDAH2O95865 285 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 PRNPP04156 253 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 PRR29P0C7W0 189 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 SRCP12931 536 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 CCL4P13236 92 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 NR1D1P20393 614 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 UGT1A3P35503 534 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 GCLMP48507 274 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 THOP1P52888 689 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 E2F4Q16254 413 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 FAXCQ5TGI0 409 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 C1QL3Q5VWW1 255 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 LVRNQ6Q4G3 990 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 UNC13DQ70J99 1090 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 HEATR4Q86WZ0 1026 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 FSTL5Q8N475 847 aaPredicted RBP14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 TTC39CQ8N584 583 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 Q8N9G6 341 aaPredicted RBP14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 TEX19Q8NA77 164 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 CHST14Q8NCH0 376 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 OR6C4Q8NGE1 309 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 OR52K2Q8NGK3 314 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 UBA3Q8TBC4 463 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 APOBEC4Q8WW27 367 aaKnown RBP14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 RNF34Q969K3 372 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 SLC45A3Q96JT2 553 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 SERPINB11Q96P15 392 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 FEM1AQ9BSK4 669 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 HESX1Q9UBX0 185 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 DAAM1Q9Y4D1 1078 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 OR51B4Q9Y5P0 310 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 FADS3Q9Y5Q0 445 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 ADGRG4Q8IZF6 3080 aa14.16□□□□□ -0.14
NKX3-1-202ENST00000523261 TCAF2A6NFQ2 919 aa14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 K7EM74 188 aa14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 CAPN5O15484 640 aaPredicted RBP14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 MT-CO1P00395 513 aa14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 FYNP06241 537 aa14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 PRKAR1AP10644 381 aa14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 GRNP28799 593 aaKnown RBP14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 NEK3P51956 506 aa14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 NUCB2P80303 420 aa14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 PPP3CAQ08209 521 aa14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 CDC20Q12834 499 aa14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 PTK2BQ14289 1009 aa14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 PHF19Q5T6S3 580 aa14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 CACNA2D3Q8IZS8 1091 aa14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 DENND6BQ8NEG7 585 aa14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 CLEC4CQ8WTT0 213 aa14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 SCG3Q8WXD2 468 aaKnown RBP14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 CCDC114Q96M63 670 aa14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 C7orf25Q9BPX7 421 aa14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 SEMA6CQ9H3T2 930 aa14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 PRDM8Q9NQV8 689 aa14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 APPL1Q9UKG1 709 aa14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 GPR34Q9UPC5 381 aa14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 DOLKQ9UPQ8 538 aa14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 HS3ST2Q9Y278 367 aa14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 PCDHGA3Q9Y5H0 932 aa14.15□□□□□ -0.14
NKX3-1-202ENST00000523261 CELSR1Q9NYQ6 3014 aa14.15□□□□□ -0.15
NKX3-1-202ENST00000523261 APCP25054 2843 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 IGLON5A6NGN9 336 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 F5H5T6 163 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 M0QYT0 321 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 PIK3R2O00459 728 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 AP1G1O43747 822 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 SETSIPP0DME0 302 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 ADRB3P13945 408 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 OAS2P29728 719 aaKnown RBP14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 RGS7P49802 495 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 AMPD3Q01432 767 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 SGCGQ13326 291 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 ELOCQ15369 112 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 ARSIQ5FYB1 569 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 EFHC2Q5JST6 749 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 MACC1Q6ZN28 852 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 SPRED1Q7Z699 444 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 ZSCAN30Q86W11 494 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 FAM114A1Q8IWE2 563 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 EFCAB3Q8N7B9 438 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 CCDC150Q8NCX0 1101 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 GPR156Q8NFN8 814 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 GRIN3AQ8TCU5 1115 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 ASB12Q8WXK4 309 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 PPP1R16AQ96I34 528 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 FAXDC2Q96IV6 333 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 PPP1R9BQ96SB3 815 aa14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 PRMT1Q99873 361 aaKnown RBP14.14□□□□□ -0.15
NKX3-1-202ENST00000523261 SHANK1Q9Y566 2161 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms