RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 NT5C1BQ96P26 610 aa9.41□□□□□ -0.9
PTPN20-216ENST00000506080 PRMT1Q99873 361 aaKnown RBP9.41□□□□□ -0.9
PTPN20-216ENST00000506080 FEM1AQ9BSK4 669 aa9.41□□□□□ -0.9
PTPN20-216ENST00000506080 SYNDIG1Q9H7V2 258 aa9.41□□□□□ -0.9
PTPN20-216ENST00000506080 POPDC2Q9HBU9 364 aa9.41□□□□□ -0.9
PTPN20-216ENST00000506080 DYRK4Q9NR20 520 aa9.41□□□□□ -0.9
PTPN20-216ENST00000506080 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.41□□□□□ -0.9
PTPN20-216ENST00000506080 SLC12A6Q9UHW9 1150 aa9.41□□□□□ -0.9
PTPN20-216ENST00000506080 COL27A1Q8IZC6 1860 aaPredicted RBP9.41□□□□□ -0.9
PTPN20-216ENST00000506080 EME2A4GXA9 379 aaPredicted RBP9.4□□□□□ -0.9
PTPN20-216ENST00000506080 POM121BA6NF01 834 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 K7ERQ8 282 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 MUSKO15146 869 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 SLC16A3O15427 465 aaKnown RBP9.4□□□□□ -0.9
PTPN20-216ENST00000506080 SNAP91O60641 907 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 TNFSF15O95150 251 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 IGLV3-25P01717 112 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 CSF2P04141 144 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 SRCP12931 536 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 RRM1P23921 792 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 ACADSBP45954 432 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 FMO5P49326 533 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 FGL2Q14314 439 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 FZD2Q14332 565 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 TAF5Q15542 800 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 ARL13BQ3SXY8 428 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 LINC00303Q3SY05 128 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 DENND1BQ6P3S1 775 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 RRAGAQ7L523 313 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 ARL14Q8N4G2 192 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 ATP11CQ8NB49 1132 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 CHST14Q8NCH0 376 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 OR2A12Q8NGT7 310 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 WDR36Q8NI36 951 aaKnown RBP9.4□□□□□ -0.9
PTPN20-216ENST00000506080 GRIN3AQ8TCU5 1115 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 LMX1AQ8TE12 382 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 SLC35C1Q96A29 364 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 ITPKCQ96DU7 683 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 BMFQ96LC9 184 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 CCNL2Q96S94 520 aaPredicted RBP9.4□□□□□ -0.9
PTPN20-216ENST00000506080 PPP1R9BQ96SB3 815 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 MUC3BQ9H195 1237 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 FAM204AQ9H8W3 233 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 IPO11Q9UI26 975 aaKnown RBP9.4□□□□□ -0.9
PTPN20-216ENST00000506080 KLF15Q9UIH9 416 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 VANGL2Q9ULK5 521 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 PCDHGA8Q9Y5G5 932 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 OR51B4Q9Y5P0 310 aa9.4□□□□□ -0.9
PTPN20-216ENST00000506080 SPTY2D1-AS1A0A0U1RR47 76 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 TRIM49BA6NDI0 452 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 E5RJQ4 531 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 H3BM21 787 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 RAD51BO15315 384 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 EFSO43281 561 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 AQP9O43315 295 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 ENDOD1O94919 500 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 PAK4O96013 591 aaPredicted RBP9.39□□□□□ -0.91
PTPN20-216ENST00000506080 PRNPP04156 253 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 NME1P15531 152 aaKnown RBP9.39□□□□□ -0.91
PTPN20-216ENST00000506080 PRCPP42785 496 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 RPL34P49207 117 aaKnown RBP9.39□□□□□ -0.91
PTPN20-216ENST00000506080 PMS1P54277 932 aaKnown RBP9.39□□□□□ -0.91
PTPN20-216ENST00000506080 YWHAZP63104 245 aaKnown RBP9.39□□□□□ -0.91
PTPN20-216ENST00000506080 SRSF1Q07955 248 aaKnown RBP eCLIP9.39□□□□□ -0.91
PTPN20-216ENST00000506080 CCDC15Q0P6D6 951 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 SRSF6Q13247 344 aaKnown RBP9.39□□□□□ -0.91
PTPN20-216ENST00000506080 AUHQ13825 339 aaKnown RBP9.39□□□□□ -0.91
PTPN20-216ENST00000506080 NR0B2Q15466 257 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 TMEM259Q4ZIN3 620 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 COLEC12Q5KU26 742 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 TPRG1LQ5T0D9 272 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 ANKRD40Q6AI12 368 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 LINGO4Q6UY18 593 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 KRBA2Q6ZNG9 492 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 ERN2Q76MJ5 926 aaKnown RBP9.39□□□□□ -0.91
PTPN20-216ENST00000506080 BEND5Q7L4P6 421 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 C14orf80Q86SX3 495 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 CLEC14AQ86T13 490 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 PARGQ86W56 976 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 DCP2Q8IU60 420 aaKnown RBP9.39□□□□□ -0.91
PTPN20-216ENST00000506080 LURAP1LQ8IV03 231 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 ARHGEF19Q8IW93 802 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 ARMC2Q8NEN0 867 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 TMIEQ8NEW7 156 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 TPCN2Q8NHX9 752 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 GRAMD1AQ96CP6 724 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 SPATA32Q96LK8 384 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 CCDC114Q96M63 670 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 PSMB7Q99436 277 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 IL12RB2Q99665 862 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 TSG101Q99816 390 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 ARHGAP9Q9BRR9 750 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 TRIM62Q9BVG3 475 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 SLC17A9Q9BYT1 436 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 TNKS2Q9H2K2 1166 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 DDIT4Q9NX09 232 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 ARMCX3Q9UH62 379 aaPredicted RBP9.39□□□□□ -0.91
PTPN20-216ENST00000506080 HS3ST4Q9Y661 456 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 HS3ST3A1Q9Y663 406 aa9.39□□□□□ -0.91
PTPN20-216ENST00000506080 PIEZO2Q9H5I5 2752 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms