RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 POLR1EQ9GZS1 481 aaKnown RBP17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 KPNA6O60684 536 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 IL1R1P14778 569 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 RIPK1Q13546 671 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 DENND6AQ8IWF6 608 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 IZUMO1Q8IYV9 350 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 PRELID2Q8N945 189 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 AP3S1Q92572 193 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 NELL1Q92832 810 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 TMEM169Q96HH4 297 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 ELOVL4Q9GZR5 314 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 ING4Q9UNL4 249 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 CLTCQ00610 1675 aaKnown RBP17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 IGSF6O95976 241 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 CDH3P22223 829 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 IL12AP29459 219 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 PLK1P53350 603 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 ELAVL2Q12926 359 aaKnown RBP17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 CRY1Q16526 586 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 SLC5A9Q2M3M2 681 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 NPNTQ6UXI9 565 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 TFAP2DQ7Z6R9 452 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 PLEKHH3Q7Z736 793 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 FAM71AQ8IYT1 594 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 BAP1Q92560 729 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 KIFC1Q9BW19 673 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 RAD18Q9NS91 495 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 COG5Q9UP83 839 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 UMODL1Q5DID0 1318 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 ANKRD63C9JTQ0 380 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 ZBTB14O43829 449 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 EDF1O60869 148 aaKnown RBP17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 GLRA2P23416 452 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 PSMD4P55036 377 aaKnown RBP17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 AMPD2Q01433 879 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 FOXR2Q6PJQ5 311 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 CYP20A1Q6UW02 462 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 PHF13Q86YI8 300 aaPredicted RBP17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 OR52K1Q8NGK4 314 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 ABCB10Q9NRK6 738 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 BBIP1A8MTZ0 92 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 GJB6O95452 261 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 OVOS1Q6IE37 1185 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 TRMT11Q7Z4G4 463 aaKnown RBP17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 PSMA8Q8TAA3 256 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 QKIQ96PU8 341 aaKnown RBP eCLIP17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 VPS51Q9UID3 782 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 TBC1D30Q9Y2I9 924 aa17.3■□□□□ 0.36
SNAPC3-202ENST00000380821 KCNK1O00180 336 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 FOSL2P15408 326 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 OAZ1P54368 228 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 RAB10P61026 200 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 CYP2A13Q16696 494 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 PYDC2Q56P42 97 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 STXBP5Q5T5C0 1151 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 TXNDC11Q6PKC3 985 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 C16orf62Q7Z3J2 963 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 ALYREFQ86V81 257 aaKnown RBP17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 GATAD2AQ86YP4 633 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 REXO5Q96IC2 774 aaKnown RBP17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 TKTL2Q9H0I9 626 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 GNPTGQ9UJJ9 305 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 HDAC3O15379 428 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 HNRNPH3P31942 346 aaKnown RBP17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 ACSM2AQ08AH3 577 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 PFKFB4Q16877 469 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 ACSM2BQ68CK6 577 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 INTS5Q6P9B9 1019 aaKnown RBP17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 UBE2Q1Q7Z7E8 422 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 OFCC1Q8IZS5 231 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 SLC2A14Q8TDB8 520 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 PPP1R14AQ96A00 147 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 POLLQ9UGP5 575 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 GMEB1Q9Y692 573 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 PPIL2Q13356 520 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 GRIK4Q16099 956 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 GPR107Q5VW38 600 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 ISLR2Q6UXK2 745 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 LRRC55Q6ZSA7 311 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 PTGR2Q8N8N7 351 aaPredicted RBP17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 KANSL3Q9P2N6 904 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 ANGPT4Q9Y264 503 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 ASTN1O14525 1302 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 GUCY1B2O75343 617 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 OR6B1O95007 311 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 CKMP06732 381 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 SHMT1P34896 483 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 CLK2P49760 499 aaKnown RBP17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 ZNF157P51786 506 aaPredicted RBP17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 FCGRTP55899 365 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 BOP1Q14137 746 aaKnown RBP17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 PERM1Q5SV97 790 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 POLNQ7Z5Q5 900 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 LRRC49Q8IUZ0 686 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 KBTBD2Q8IY47 623 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 TRIM39Q9HCM9 518 aa17.29■□□□□ 0.36
SNAPC3-202ENST00000380821 UBE2QL1A1L167 161 aa17.28■□□□□ 0.36
SNAPC3-202ENST00000380821 BTN3A3O00478 584 aa17.28■□□□□ 0.36
SNAPC3-202ENST00000380821 AKAP5P24588 427 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms