RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 RABGGTBP53611 331 aa18.33■□□□□ 0.52
CD40-201ENST00000372276 RAB10P61026 200 aa18.33■□□□□ 0.52
CD40-201ENST00000372276 POU4F1Q01851 419 aa18.33■□□□□ 0.52
CD40-201ENST00000372276 BLMHQ13867 455 aa18.33■□□□□ 0.52
CD40-201ENST00000372276 UBAP2LQ14157 1087 aaKnown RBP18.33■□□□□ 0.52
CD40-201ENST00000372276 GRM3Q14832 879 aa18.33■□□□□ 0.52
CD40-201ENST00000372276 OTOP3Q7RTS5 596 aa18.33■□□□□ 0.52
CD40-201ENST00000372276 MYLK4Q86YV6 388 aaPredicted RBP18.33■□□□□ 0.52
CD40-201ENST00000372276 PLD6Q8N2A8 252 aaKnown RBP18.33■□□□□ 0.52
CD40-201ENST00000372276 UMODL1-AS1Q8N2C9 162 aa18.33■□□□□ 0.52
CD40-201ENST00000372276 TDRD5Q8NAT2 981 aaKnown RBP18.33■□□□□ 0.52
CD40-201ENST00000372276 ACTRT2Q8TDY3 377 aa18.33■□□□□ 0.52
CD40-201ENST00000372276 ZNF333Q96JL9 665 aa18.33■□□□□ 0.52
CD40-201ENST00000372276 CCDC28BQ9BUN5 200 aa18.33■□□□□ 0.52
CD40-201ENST00000372276 RHOBTB2Q9BYZ6 727 aa18.33■□□□□ 0.52
CD40-201ENST00000372276 ZCWPW1Q9H0M4 648 aa18.33■□□□□ 0.52
CD40-201ENST00000372276 RGS18Q9NS28 235 aa18.33■□□□□ 0.52
CD40-201ENST00000372276 NDE1Q9NXR1 346 aa18.33■□□□□ 0.52
CD40-201ENST00000372276 ARHGAP26Q9UNA1 814 aa18.33■□□□□ 0.52
CD40-201ENST00000372276 LRCH1Q9Y2L9 728 aa18.33■□□□□ 0.52
CD40-201ENST00000372276 NLRC5Q86WI3 1866 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 HEATR9A2RTY3 570 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 HDAC3O15379 428 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 THRAP10827 490 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 RHOQP17081 205 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 CPOXP36551 454 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 CPA2P48052 419 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 NUMBP49757 651 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 PSEN1P49768 467 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 RPL14P50914 215 aaKnown RBP18.32■□□□□ 0.52
CD40-201ENST00000372276 TNK2Q07912 1038 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 CRHR2Q13324 411 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 OLIG2Q13516 323 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 C1orf146Q5VVC0 180 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 RANBP10Q6VN20 620 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 ACAD11Q709F0 780 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 NUP93Q8N1F7 819 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 GPATCH11Q8N954 259 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 SCAMP5Q8TAC9 235 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 STYXQ8WUJ0 223 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 WDR60Q8WVS4 1066 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 TSPAN17Q96FV3 270 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 CNDP1Q96KN2 507 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 APOL2Q9BQE5 337 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 RTKNQ9BST9 563 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 FICDQ9BVA6 458 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 C1QTNF1Q9BXJ1 281 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.32■□□□□ 0.52
CD40-201ENST00000372276 VCX3BQ9H321 246 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 RETREG1Q9H6L5 497 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 COG4Q9H9E3 785 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 BCAP29Q9UHQ4 241 aa18.32■□□□□ 0.52
CD40-201ENST00000372276 SYN3O14994 580 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 NPHS1O60500 1241 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 KRT36O76013 467 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 ARCN1P48444 511 aaKnown RBP18.31■□□□□ 0.52
CD40-201ENST00000372276 CD151P48509 253 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 SLC12A2P55011 1212 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 KCNA10Q16322 511 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 MAP3K21Q5TCX8 1036 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 SEL1L3Q68CR1 1132 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 DENND5AQ6IQ26 1287 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 SCD5Q86SK9 330 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 AFAP1L2Q8N4X5 818 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 ATP6V0D2Q8N8Y2 350 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 C2CD4AQ8NCU7 369 aaPredicted RBP18.31■□□□□ 0.52
CD40-201ENST00000372276 IPMKQ8NFU5 416 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 TRIB2Q92519 343 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 CASP10Q92851 521 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 FAR2Q96K12 515 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 SCYL1Q96KG9 808 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 MRPL57Q9BQC6 102 aaKnown RBP18.31■□□□□ 0.52
CD40-201ENST00000372276 GATA5Q9BWX5 397 aaPredicted RBP18.31■□□□□ 0.52
CD40-201ENST00000372276 TCF7L2Q9NQB0 619 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 OSER1Q9NX31 292 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 IL1RAPL1Q9NZN1 696 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 RUVBL2Q9Y230 463 aaKnown RBP18.31■□□□□ 0.52
CD40-201ENST00000372276 INPP5FQ9Y2H2 1132 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 THSD7BQ9C0I4 1608 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 MATN2O00339 956 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 ALDH1A1P00352 501 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 AHSGP02765 367 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 HOXB8P17481 243 aaPredicted RBP18.31■□□□□ 0.52
CD40-201ENST00000372276 NCF2P19878 526 aaPredicted RBP18.31■□□□□ 0.52
CD40-201ENST00000372276 TM4SF4P48230 202 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 DNAJB13P59910 316 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 BTKQ06187 659 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 SMARCB1Q12824 385 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 IRGCQ6NXR0 463 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 RIPOR1Q6ZS17 1223 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 SLC24A5Q71RS6 500 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 MAVSQ7Z434 540 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 TNS4Q8IZW8 715 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 USP33Q8TEY7 942 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 ATXN7L3BQ96GX2 97 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 SLC39A13Q96H72 371 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 TRPC7Q9HCX4 862 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 TREX1Q9NSU2 369 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 ZNF358Q9NW07 568 aa18.31■□□□□ 0.52
CD40-201ENST00000372276 CLIC5Q9NZA1 410 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms