RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 SHCBP1LQ9BZQ2 653 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 ZNF385DQ9H6B1 395 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 COG4Q9H9E3 785 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 PLGRKTQ9HBL7 147 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 JPH1Q9HDC5 661 aaPredicted RBP7.64□□□□□ -1.19
C11orf54-202ENST00000354421 DDX18Q9NVP1 670 aaKnown RBP7.64□□□□□ -1.19
C11orf54-202ENST00000354421 FAIMQ9NVQ4 179 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 RHBDL2Q9NX52 303 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 TMEM216Q9P0N5 145 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 RSL24D1Q9UHA3 163 aaKnown RBP7.64□□□□□ -1.19
C11orf54-202ENST00000354421 CPSF3Q9UKF6 684 aaKnown RBP7.64□□□□□ -1.19
C11orf54-202ENST00000354421 PCDHGB4Q9UN71 923 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 SCAF8Q9UPN6 1271 aaKnown RBP7.64□□□□□ -1.19
C11orf54-202ENST00000354421 PCDHGB5Q9Y5G0 923 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 SQORQ9Y6N5 450 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 H3BSA7 217 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 B4GALT4O60513 344 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 ZMPSTE24O75844 475 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 IL2RAP01589 272 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 ASNSP08243 561 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 FAM163BP0C2L3 166 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 COL6A1P12109 1028 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 ATP6V1B1P15313 513 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 ZFXP17010 805 aaPredicted RBP7.64□□□□□ -1.19
C11orf54-202ENST00000354421 XRCC1P18887 633 aaPredicted RBP7.64□□□□□ -1.19
C11orf54-202ENST00000354421 ADORA2AP29274 412 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 GARSP41250 739 aaKnown RBP7.64□□□□□ -1.19
C11orf54-202ENST00000354421 TNFSF9P41273 254 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 PHKA2P46019 1235 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 EFNA5P52803 228 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 THOP1P52888 689 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 TUBA4AP68366 448 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 PEX6Q13608 980 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 FLOT2Q14254 428 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 SLC9B1Q4ZJI4 515 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 SEZ6Q53EL9 994 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 C6orf52Q5T4I8 152 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 FAM102AQ5T9C2 384 aaPredicted RBP7.64□□□□□ -1.19
C11orf54-202ENST00000354421 TMEM214Q6NUQ4 689 aaKnown RBP7.64□□□□□ -1.19
C11orf54-202ENST00000354421 LRRC8BQ6P9F7 803 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 IYDQ6PHW0 289 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 SCARA5Q6ZMJ2 495 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 SNX32Q86XE0 403 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 DSELQ8IZU8 1212 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 PGAM4Q8N0Y7 254 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 ZBTB8BQ8NAP8 495 aaPredicted RBP7.64□□□□□ -1.19
C11orf54-202ENST00000354421 PCDH19Q8TAB3 1148 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 SLC7A14Q8TBB6 771 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 QKIQ96PU8 341 aaKnown RBP eCLIP7.64□□□□□ -1.196e-11■■■■■ 40.2
C11orf54-202ENST00000354421 LENG8Q96PV6 779 aaPredicted RBP7.64□□□□□ -1.19
C11orf54-202ENST00000354421 PRPF18Q99633 342 aaKnown RBP7.64□□□□□ -1.19
C11orf54-202ENST00000354421 PKP2Q99959 881 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 ZNF670Q9BS34 389 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 ZNF341Q9BYN7 854 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 PRDM16Q9HAZ2 1276 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 EIF2B3Q9NR50 452 aaKnown RBP7.64□□□□□ -1.19
C11orf54-202ENST00000354421 MORF4L1Q9UBU8 362 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 ITGB1BP2Q9UKP3 347 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 BLOC1S6Q9UL45 172 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 RNF11Q9Y3C5 154 aa7.64□□□□□ -1.19
C11orf54-202ENST00000354421 MAFBQ9Y5Q3 323 aaPredicted RBP7.64□□□□□ -1.19
C11orf54-202ENST00000354421 DOCK5Q9H7D0 1870 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 hCG_2014768A0A024R1R8 64 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 WDR27A2RRH5 827 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 TRIM64CA6NLI5 447 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 KPNA7A9QM74 516 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 ACOT8O14734 319 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 AIM2O14862 343 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 ADCY6O43306 1168 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 BMP10O95393 424 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 HSPA4LO95757 839 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 TNNC2P02585 160 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 C8BP07358 591 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 HOXC6P09630 235 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 VDRP11473 427 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 PDGFRAP16234 1089 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 PSMC3P17980 439 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 PGAM1P18669 254 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 ME2P23368 584 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 GPD2P43304 727 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 NUDT2P50583 147 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 PRKAA2P54646 552 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 ZNF280AP59817 542 aaPredicted RBP7.63□□□□□ -1.19
C11orf54-202ENST00000354421 MRPS22P82650 360 aaKnown RBP7.63□□□□□ -1.19
C11orf54-202ENST00000354421 PTPN11Q06124 597 aaPredicted RBP7.63□□□□□ -1.19
C11orf54-202ENST00000354421 CAPSQ13938 189 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 CEACAM7Q14002 265 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 BAATQ14032 418 aaPredicted RBP7.63□□□□□ -1.19
C11orf54-202ENST00000354421 FRG1Q14331 258 aaKnown RBP7.63□□□□□ -1.19
C11orf54-202ENST00000354421 GK3PQ14409 553 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 TARBP2Q15633 366 aaKnown RBP7.63□□□□□ -1.19
C11orf54-202ENST00000354421 MGAT5BQ3V5L5 792 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 GRTP1Q5TC63 336 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 SH3PXD2AQ5TCZ1 1133 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 DUS1LQ6P1R4 473 aaKnown RBP7.63□□□□□ -1.19
C11orf54-202ENST00000354421 KLHL35Q6PF15 583 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 FIGNL1Q6PIW4 674 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 AMIGO2Q86SJ2 522 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 TSPAN14Q8NG11 270 aa7.63□□□□□ -1.19
C11orf54-202ENST00000354421 HM13Q8TCT9 377 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms