RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 VCLP18206 1134 aa14.37□□□□□ -0.11
COL1A2-201ENST00000297268 FECHP22830 423 aa14.37□□□□□ -0.11
COL1A2-201ENST00000297268 OR1E1P30953 314 aa14.37□□□□□ -0.11
COL1A2-201ENST00000297268 NOS2P35228 1153 aa14.37□□□□□ -0.11
COL1A2-201ENST00000297268 KLF10Q13118 480 aa14.37□□□□□ -0.11
COL1A2-201ENST00000297268 LPIN1Q14693 890 aa14.37□□□□□ -0.11
COL1A2-201ENST00000297268 FASTKD3Q14CZ7 662 aaKnown RBP14.37□□□□□ -0.11
COL1A2-201ENST00000297268 GRIK5Q16478 980 aa14.37□□□□□ -0.11
COL1A2-201ENST00000297268 TMEM191CA6NGB0 347 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 H3BRB1 525 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 ZNF7P17097 686 aaPredicted RBP14.36□□□□□ -0.11
COL1A2-201ENST00000297268 CRHR1P34998 444 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 TIMM50Q3ZCQ8 353 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 ARMC3Q5W041 872 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 ZNF467Q7Z7K2 595 aaPredicted RBP14.36□□□□□ -0.11
COL1A2-201ENST00000297268 STAG3L4Q8TBR4 150 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 TSEN34Q9BSV6 310 aaKnown RBP14.36□□□□□ -0.11
COL1A2-201ENST00000297268 ULBP1Q9BZM6 244 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 TUT1Q9H6E5 874 aaKnown RBP14.36□□□□□ -0.11
COL1A2-201ENST00000297268 CAPN10Q9HC96 672 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 TIMMDC1Q9NPL8 285 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 VPS45Q9NRW7 570 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 GALNT8Q9NY28 637 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 TMCO1Q9UM00 188 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.36□□□□□ -0.11
COL1A2-201ENST00000297268 TFEBP19484 476 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 PTGIRP43119 386 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 DPYSQ14117 519 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 FGD3Q5JSP0 725 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 FNBP1LQ5T0N5 605 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 NANOGNBQ7Z5D8 188 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 WDR36Q8NI36 951 aaKnown RBP14.36□□□□□ -0.11
COL1A2-201ENST00000297268 C7orf26Q96N11 449 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 LGMNQ99538 433 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 CADM1Q9BY67 442 aaKnown RBP14.36□□□□□ -0.11
COL1A2-201ENST00000297268 FANCEQ9HB96 536 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 SETD4Q9NVD3 440 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 AP3M1Q9Y2T2 418 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 SNPHO15079 494 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 SLC7A2P52569 658 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 MTTPP55157 894 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 SFSWAPQ12872 951 aaKnown RBP14.36□□□□□ -0.11
COL1A2-201ENST00000297268 ARHGAP36Q6ZRI8 547 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 ANKRD13AQ8IZ07 590 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 AMER2Q8N7J2 671 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 S100ZQ8WXG8 99 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 IDI2Q9BXS1 227 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 CLEC4MQ9H2X3 399 aaPredicted RBP14.36□□□□□ -0.11
COL1A2-201ENST00000297268 PRDM12Q9H4Q4 367 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 CATSPERZQ9NTU4 200 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 EGFL7Q9UHF1 273 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 SLC12A4Q9UP95 1085 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 GNEQ9Y223 722 aaKnown RBP14.36□□□□□ -0.11
COL1A2-201ENST00000297268 RIMBP3CA6NJZ7 1639 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 RIMBP3BA6NNM3 1639 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 RIMBP3Q9UFD9 1639 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 ATP6AP2A0A1C7CYW4 349 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 ATP6AP2O75787 350 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 MBL2P11226 248 aaPredicted RBP14.36□□□□□ -0.11
COL1A2-201ENST00000297268 TNFSF9P41273 254 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 JAM2P57087 298 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 RHBDL3P58872 404 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 ZNF846Q147U1 533 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 CTXN3Q4LDR2 81 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 WDR55Q9H6Y2 383 aaPredicted RBP14.36□□□□□ -0.11
COL1A2-201ENST00000297268 NOL11Q9H8H0 719 aaKnown RBP14.36□□□□□ -0.11
COL1A2-201ENST00000297268 ARHGEF3Q9NR81 526 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 TRPC4Q9UBN4 977 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 OR12D3Q9UGF7 316 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 BTRCQ9Y297 605 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 GMPPBQ9Y5P6 360 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 TMEM131LA2VDJ0 1609 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 CCL15-CCL14A0A0B4J2E2 113 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 NFICP08651 508 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 HGFP14210 728 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 ZNF37AP17032 561 aaPredicted RBP14.36□□□□□ -0.11
COL1A2-201ENST00000297268 GOT1P17174 413 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 IDH2P48735 452 aaKnown RBP14.36□□□□□ -0.11
COL1A2-201ENST00000297268 ITGA1P56199 1179 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 EN1Q05925 392 aaPredicted RBP14.36□□□□□ -0.11
COL1A2-201ENST00000297268 CCL15Q16663 113 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 FAM187BQ17R55 369 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 ADGRD1Q6QNK2 874 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 OLFML1Q6UWY5 402 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 CDH24Q86UP0 819 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 ZNF540Q8NDQ6 660 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 CENPIQ92674 756 aaPredicted RBP14.36□□□□□ -0.11
COL1A2-201ENST00000297268 FAM84AQ96KN4 292 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 CAB39LQ9H9S4 337 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 NR2E1Q9Y466 385 aa14.36□□□□□ -0.11
COL1A2-201ENST00000297268 EIF2S1P05198 315 aaKnown RBP14.35□□□□□ -0.11
COL1A2-201ENST00000297268 DBTP11182 482 aaKnown RBP14.35□□□□□ -0.11
COL1A2-201ENST00000297268 CLCN5P51795 746 aa14.35□□□□□ -0.11
COL1A2-201ENST00000297268 ZNF135P52742 658 aaPredicted RBP14.35□□□□□ -0.11
COL1A2-201ENST00000297268 GRIK4Q16099 956 aa14.35□□□□□ -0.11
COL1A2-201ENST00000297268 C6orf52Q5T4I8 152 aa14.35□□□□□ -0.11
COL1A2-201ENST00000297268 KRT78Q8N1N4 520 aa14.35□□□□□ -0.11
COL1A2-201ENST00000297268 MCRS1Q96EZ8 462 aa14.35□□□□□ -0.11
COL1A2-201ENST00000297268 CHID1Q9BWS9 393 aa14.35□□□□□ -0.11
COL1A2-201ENST00000297268 OPTCQ9UBM4 332 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms