RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 CPT1CQ8TCG5 803 aa11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 ERCC4Q92889 916 aaPredicted RBP11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 AZIN2Q96A70 460 aa11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 KIAA1143Q96AT1 154 aaPredicted RBP11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 CDH19Q9H159 772 aa11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 CYP3A43Q9HB55 503 aa11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 SLC25A13Q9UJS0 675 aa11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 ZFR2Q9UPR6 939 aaKnown RBP11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 LRRK1Q38SD2 2015 aa11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 ADGRG4Q8IZF6 3080 aa11.27□□□□□ -0.6
PTP4A1-207ENST00000639568 MKRN2OSH3BPM6 223 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 H3BQV1 296 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 NKX2-8O15522 239 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 TGFB1I1O43294 461 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 ASS1P00966 412 aaKnown RBP11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 PDGFRAP16234 1089 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 TSHRP16473 764 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 PIK3CAP42336 1068 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 COPB1P53618 953 aaKnown RBP11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 EIF2B5Q13144 721 aaKnown RBP11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 DLG2Q15700 870 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 TMEM259Q4ZIN3 620 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 ZNF394Q53GI3 561 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 DCAF6Q58WW2 860 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 MS4A13Q5J8X5 152 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 NADSYN1Q6IA69 706 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 ASB18Q6ZVZ8 466 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 CCNJLQ8IV13 435 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 NELFCDQ8IXH7 590 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 SIX6OS1Q8N1H7 587 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 KYQ8NBH2 561 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 PARD3BQ8TEW8 1205 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 FEM1CQ96JP0 617 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 SLC45A3Q96JT2 553 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 ZSCAN31Q96LW9 406 aaPredicted RBP11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 TBATAQ96M53 351 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 CCDC114Q96M63 670 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 PPP1R9BQ96SB3 815 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 LRRC61Q9BV99 259 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 TCEAL2Q9H3H9 227 aaPredicted RBP11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 RNF215Q9Y6U7 377 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 KIF26BQ2KJY2 2108 aa11.27□□□□□ -0.61
PTP4A1-207ENST00000639568 SPENQ96T58 3664 aaKnown RBP11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 COL27A1Q8IZC6 1860 aaPredicted RBP11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 WIPF3A6NGB9 483 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 YJEFN3A6XGL0 299 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 E7ENQ6 273 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 SPTLC2O15270 562 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 RAD51BO15315 384 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 SPINT1O43278 529 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 ATP9BO43861 1147 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 IGLV3-27P01718 113 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 ITGB7P26010 798 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 UGT1A3P35503 534 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 STAT6P42226 847 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 CLDN10P78369 228 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 ADIGQ0VDE8 80 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 CDC20Q12834 499 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 ELOCQ15369 112 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 KIAA1161Q6NSJ0 714 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 LVRNQ6Q4G3 990 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 CCDC73Q6ZRK6 1079 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 ERN2Q76MJ5 926 aaKnown RBP11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 TMPRSS9Q7Z410 1059 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 LGI2Q8N0V4 545 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 SLC34A3Q8N130 599 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 ANKRD52Q8NB46 1076 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 ZNF507Q8TCN5 953 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 MYEOVQ96EZ4 313 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 TAAR9Q96RI9 348 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 EFHD1Q9BUP0 239 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 INTS2Q9H0H0 1204 aaKnown RBP11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 NUCKS1Q9H1E3 243 aaKnown RBP11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 GPN2Q9H9Y4 310 aaPredicted RBP11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 TFIP11Q9UBB9 837 aaKnown RBP11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 GPR34Q9UPC5 381 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 CELSR1Q9NYQ6 3014 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 PDZD2O15018 2839 aa11.26□□□□□ -0.61
PTP4A1-207ENST00000639568 ALPIP09923 528 aa11.25□□□□□ -0.61
PTP4A1-207ENST00000639568 CTSEP14091 401 aa11.25□□□□□ -0.61
PTP4A1-207ENST00000639568 NR1D1P20393 614 aa11.25□□□□□ -0.61
PTP4A1-207ENST00000639568 CHRNA3P32297 505 aa11.25□□□□□ -0.61
PTP4A1-207ENST00000639568 MC1RQ01726 317 aa11.25□□□□□ -0.61
PTP4A1-207ENST00000639568 PPARDQ03181 441 aa11.25□□□□□ -0.61
PTP4A1-207ENST00000639568 EIF2S3LQ2VIR3 472 aaKnown RBP11.25□□□□□ -0.61
PTP4A1-207ENST00000639568 ZACNQ401N2 412 aa11.25□□□□□ -0.61
PTP4A1-207ENST00000639568 TCTN3Q6NUS6 607 aa11.25□□□□□ -0.61
PTP4A1-207ENST00000639568 BHLHA9Q7RTU4 235 aa11.25□□□□□ -0.61
PTP4A1-207ENST00000639568 FSTL5Q8N475 847 aaPredicted RBP11.25□□□□□ -0.61
PTP4A1-207ENST00000639568 CCDC150Q8NCX0 1101 aa11.25□□□□□ -0.61
PTP4A1-207ENST00000639568 CCDC112Q8NEF3 446 aa11.25□□□□□ -0.61
PTP4A1-207ENST00000639568 TMIEQ8NEW7 156 aa11.25□□□□□ -0.61
PTP4A1-207ENST00000639568 PCDH19Q8TAB3 1148 aa11.25□□□□□ -0.61
PTP4A1-207ENST00000639568 PRR7Q8TB68 274 aa11.25□□□□□ -0.61
PTP4A1-207ENST00000639568 PLEKHO2Q8TD55 490 aa11.25□□□□□ -0.61
PTP4A1-207ENST00000639568 PPP1R16AQ96I34 528 aa11.25□□□□□ -0.61
PTP4A1-207ENST00000639568 HDAC8Q9BY41 377 aa11.25□□□□□ -0.61
PTP4A1-207ENST00000639568 LRRC27Q9C0I9 530 aa11.25□□□□□ -0.61
PTP4A1-207ENST00000639568 CLPBQ9H078 707 aa11.25□□□□□ -0.61
PTP4A1-207ENST00000639568 CGNQ9P2M7 1197 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms