RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 LRRC19Q9H756 370 aa17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 PCDH18Q9HCL0 1135 aa17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 CD93Q9NPY3 652 aa17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 DYRK4Q9NR20 520 aa17.62■□□□□ 0.41
SHKBP1-212ENST00000596163 CKAP5Q14008 2032 aa17.61■□□□□ 0.41
SHKBP1-212ENST00000596163 A0A1W2PP55 124 aa17.61■□□□□ 0.41
SHKBP1-212ENST00000596163 LRRC72A6NJI9 287 aa17.61■□□□□ 0.41
SHKBP1-212ENST00000596163 MEI4A8MW99 385 aa17.61■□□□□ 0.41
SHKBP1-212ENST00000596163 PRR5-ARHGAP8B1AHC4 643 aa17.61■□□□□ 0.41
SHKBP1-212ENST00000596163 SEMA4FO95754 770 aa17.61■□□□□ 0.41
SHKBP1-212ENST00000596163 SERPINB6P35237 376 aa17.61■□□□□ 0.41
SHKBP1-212ENST00000596163 SNRPD1P62314 119 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-212ENST00000596163 ARHGAP8P85298 464 aa17.61■□□□□ 0.41
SHKBP1-212ENST00000596163 PLA2G2CQ5R387 149 aa17.61■□□□□ 0.41
SHKBP1-212ENST00000596163 PIP4K2CQ8TBX8 421 aa17.61■□□□□ 0.41
SHKBP1-212ENST00000596163 PPP1R16AQ96I34 528 aa17.61■□□□□ 0.41
SHKBP1-212ENST00000596163 HSPA12BQ96MM6 686 aa17.61■□□□□ 0.41
SHKBP1-212ENST00000596163 CSPG4P5Q96PW8 444 aa17.61■□□□□ 0.41
SHKBP1-212ENST00000596163 HEPHQ9BQS7 1158 aa17.61■□□□□ 0.41
SHKBP1-212ENST00000596163 TNKS2Q9H2K2 1166 aa17.61■□□□□ 0.41
SHKBP1-212ENST00000596163 SUSD2Q9UGT4 822 aa17.61■□□□□ 0.41
SHKBP1-212ENST00000596163 IL36AQ9UHA7 158 aa17.61■□□□□ 0.41
SHKBP1-212ENST00000596163 TPX2Q9ULW0 747 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-212ENST00000596163 FCF1Q9Y324 198 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-212ENST00000596163 GPR179Q6PRD1 2367 aa17.61■□□□□ 0.41
SHKBP1-212ENST00000596163 RIF1Q5UIP0 2472 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 A0A0A6YYK5 440 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 SOWAHDA6NJG2 315 aa17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 METTL12A8MUP2 240 aa17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 KHNYNO15037 678 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 SLC7A4O43246 635 aa17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 CD160O95971 181 aa17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 GSRP00390 522 aa17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 GNSP15586 552 aa17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 TGM1P22735 817 aa17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 AMPD1P23109 780 aa17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 ACSL1P33121 698 aa17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 GJC1P36383 396 aa17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 PAPOLAP51003 745 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 HADHBP55084 474 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 GSDMDP57764 484 aa17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 RAD51Q06609 339 aa17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 ODF2Q5BJF6 829 aa17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 TXNRD3NBQ6F5E7 133 aa17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 SLC41A1Q8IVJ1 513 aa17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 RYBPQ8N488 228 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 FAM71BQ8TC56 605 aa17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 CELF6Q96J87 481 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 LRIG1Q96JA1 1093 aa17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 SLC39A8Q9C0K1 460 aa17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 NEUROG2Q9H2A3 272 aa17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 PARD6AQ9NPB6 346 aa17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 HECAQ9UBI9 543 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 UBA2Q9UBT2 640 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 PILRBQ9UKJ0 227 aa17.6■□□□□ 0.41
SHKBP1-212ENST00000596163 PTPRZ1P23471 2315 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 DOCK4Q8N1I0 1966 aa17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 DFFAO00273 331 aa17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 PRAMEF11O60813 436 aa17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 ZNF821O75541 412 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 POP4O95707 220 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 SDHBP21912 280 aa17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 ITPKAP23677 461 aa17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 DUOXA1Q1HG43 343 aa17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 LRRC38Q5VT99 294 aa17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 DCAF12L1Q5VU92 463 aa17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 AFMIDQ63HM1 303 aa17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 DPY19L3Q6ZPD9 716 aa17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 PRR23CQ6ZRP0 262 aa17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 OR2AP1Q8NGE2 309 aa17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 OR2T34Q8NGX1 318 aa17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 TSC1Q92574 1164 aa17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 GDAP1L1Q96MZ0 367 aa17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 ZNF670Q9BS34 389 aa17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 NUSAP1Q9BXS6 441 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 CALN1Q9BXU9 219 aa17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 KLC2Q9H0B6 622 aa17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 KDM4CQ9H3R0 1056 aa17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 SP110Q9HB58 689 aa17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 EVLQ9UI08 416 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 OTOGLQ3ZCN5 2332 aa17.59■□□□□ 0.41
SHKBP1-212ENST00000596163 KPNA3O00505 521 aaPredicted RBP17.58■□□□□ 0.4
SHKBP1-212ENST00000596163 SPOPO43791 374 aa17.58■□□□□ 0.4
SHKBP1-212ENST00000596163 TMCC1O94876 653 aa17.58■□□□□ 0.4
SHKBP1-212ENST00000596163 IGSF6O95976 241 aa17.58■□□□□ 0.4
SHKBP1-212ENST00000596163 CCNHP51946 323 aaPredicted RBP17.58■□□□□ 0.4
SHKBP1-212ENST00000596163 TAS2R40P59535 323 aa17.58■□□□□ 0.4
SHKBP1-212ENST00000596163 RHOAP61586 193 aa17.58■□□□□ 0.4
SHKBP1-212ENST00000596163 IL10RBQ08334 325 aa17.58■□□□□ 0.4
SHKBP1-212ENST00000596163 DPYSL3Q14195 570 aa17.58■□□□□ 0.4
SHKBP1-212ENST00000596163 RFTN1Q14699 578 aaPredicted RBP17.58■□□□□ 0.4
SHKBP1-212ENST00000596163 MYLK3Q32MK0 819 aa17.58■□□□□ 0.4
SHKBP1-212ENST00000596163 AASDHQ4L235 1098 aaPredicted RBP17.58■□□□□ 0.4
SHKBP1-212ENST00000596163 ATP13A4Q4VNC1 1196 aa17.58■□□□□ 0.4
SHKBP1-212ENST00000596163 ARSIQ5FYB1 569 aa17.58■□□□□ 0.4
SHKBP1-212ENST00000596163 TMCO4Q5TGY1 634 aa17.58■□□□□ 0.4
SHKBP1-212ENST00000596163 PEAR1Q5VY43 1037 aaPredicted RBP17.58■□□□□ 0.4
SHKBP1-212ENST00000596163 LEKR1Q6ZMV7 388 aa17.58■□□□□ 0.4
SHKBP1-212ENST00000596163 LRRC49Q8IUZ0 686 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms