RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 SERPINB11Q96P15 392 aa17.9■□□□□ 0.46
PVT1-220ENST00000524165 PPP1R9BQ96SB3 815 aa17.9■□□□□ 0.46
PVT1-220ENST00000524165 C7orf25Q9BPX7 421 aa17.9■□□□□ 0.46
PVT1-220ENST00000524165 HDAC8Q9BY41 377 aa17.9■□□□□ 0.46
PVT1-220ENST00000524165 SLC39A2Q9NP94 309 aa17.9■□□□□ 0.46
PVT1-220ENST00000524165 DYRK4Q9NR20 520 aa17.9■□□□□ 0.46
PVT1-220ENST00000524165 HESX1Q9UBX0 185 aa17.9■□□□□ 0.46
PVT1-220ENST00000524165 FARP1Q9Y4F1 1045 aaPredicted RBP17.9■□□□□ 0.46
PVT1-220ENST00000524165 ITPR3Q14573 2671 aa17.9■□□□□ 0.46
PVT1-220ENST00000524165 FPGTO14772 594 aa17.89■□□□□ 0.45
PVT1-220ENST00000524165 RAD51BO15315 384 aa17.89■□□□□ 0.45
PVT1-220ENST00000524165 YY2O15391 372 aa17.89■□□□□ 0.45
PVT1-220ENST00000524165 MTSS1O43312 755 aa17.89■□□□□ 0.45
PVT1-220ENST00000524165 PAK4O96013 591 aaPredicted RBP17.89■□□□□ 0.45
PVT1-220ENST00000524165 CHRNA3P32297 505 aa17.89■□□□□ 0.45
PVT1-220ENST00000524165 ETV5P41161 510 aa17.89■□□□□ 0.45
PVT1-220ENST00000524165 NUMBP49757 651 aa17.89■□□□□ 0.45
PVT1-220ENST00000524165 ATP1A2P50993 1020 aa17.89■□□□□ 0.45
PVT1-220ENST00000524165 ZFP36L1Q07352 338 aaKnown RBP17.89■□□□□ 0.45
PVT1-220ENST00000524165 FGL2Q14314 439 aa17.89■□□□□ 0.45
PVT1-220ENST00000524165 TPRG1LQ5T0D9 272 aa17.89■□□□□ 0.45
PVT1-220ENST00000524165 FHL5Q5TD97 284 aa17.89■□□□□ 0.45
PVT1-220ENST00000524165 ERN2Q76MJ5 926 aaKnown RBP17.89■□□□□ 0.45
PVT1-220ENST00000524165 ZSCAN30Q86W11 494 aa17.89■□□□□ 0.45
PVT1-220ENST00000524165 SDR16C5Q8N3Y7 309 aa17.89■□□□□ 0.45
PVT1-220ENST00000524165 SH2D3CQ8N5H7 860 aa17.89■□□□□ 0.45
PVT1-220ENST00000524165 LENG8Q96PV6 779 aaPredicted RBP17.89■□□□□ 0.45
PVT1-220ENST00000524165 CMKLR1Q99788 373 aa17.89■□□□□ 0.45
PVT1-220ENST00000524165 LRRC61Q9BV99 259 aa17.89■□□□□ 0.45
PVT1-220ENST00000524165 CPEB1Q9BZB8 566 aaKnown RBP17.89■□□□□ 0.45
PVT1-220ENST00000524165 LRRN3Q9H3W5 708 aa17.89■□□□□ 0.45
PVT1-220ENST00000524165 STMND1H3BQB6 276 aa17.88■□□□□ 0.45
PVT1-220ENST00000524165 BNIP3LO60238 219 aa17.88■□□□□ 0.45
PVT1-220ENST00000524165 LTFP02788 710 aa17.88■□□□□ 0.45
PVT1-220ENST00000524165 ELAVL4P26378 380 aaKnown RBP17.88■□□□□ 0.45
PVT1-220ENST00000524165 VAMP7P51809 220 aa17.88■□□□□ 0.45
PVT1-220ENST00000524165 MAPK10P53779 464 aa17.88■□□□□ 0.45
PVT1-220ENST00000524165 NUCB2P80303 420 aa17.88■□□□□ 0.45
PVT1-220ENST00000524165 C1orf61Q13536 156 aa17.88■□□□□ 0.45
PVT1-220ENST00000524165 TMEM164Q5U3C3 297 aa17.88■□□□□ 0.45
PVT1-220ENST00000524165 PHACTR4Q8IZ21 702 aa17.88■□□□□ 0.45
PVT1-220ENST00000524165 CCAR2Q8N163 923 aaKnown RBP17.88■□□□□ 0.45
PVT1-220ENST00000524165 GPBAR1Q8TDU6 330 aa17.88■□□□□ 0.45
PVT1-220ENST00000524165 ALG14Q96F25 216 aa17.88■□□□□ 0.45
PVT1-220ENST00000524165 CCDC114Q96M63 670 aa17.88■□□□□ 0.45
PVT1-220ENST00000524165 TCEAL2Q9H3H9 227 aaPredicted RBP17.88■□□□□ 0.45
PVT1-220ENST00000524165 MOCS2O96007 188 aaPredicted RBP17.87■□□□□ 0.45
PVT1-220ENST00000524165 PRNPP04156 253 aa17.87■□□□□ 0.45
PVT1-220ENST00000524165 SETSIPP0DME0 302 aa17.87■□□□□ 0.45
PVT1-220ENST00000524165 LCP1P13796 627 aa17.87■□□□□ 0.45
PVT1-220ENST00000524165 TACR2P21452 398 aa17.87■□□□□ 0.45
PVT1-220ENST00000524165 PFN3P60673 137 aa17.87■□□□□ 0.45
PVT1-220ENST00000524165 KLRB1Q12918 225 aa17.87■□□□□ 0.45
PVT1-220ENST00000524165 PTK2BQ14289 1009 aa17.87■□□□□ 0.45
PVT1-220ENST00000524165 TTC39BQ5VTQ0 682 aaPredicted RBP17.87■□□□□ 0.45
PVT1-220ENST00000524165 RAP1GAP2Q684P5 730 aa17.87■□□□□ 0.45
PVT1-220ENST00000524165 CXorf57Q6NSI4 855 aaKnown RBP17.87■□□□□ 0.45
PVT1-220ENST00000524165 CHSY1Q86X52 802 aa17.87■□□□□ 0.45
PVT1-220ENST00000524165 OR6C4Q8NGE1 309 aa17.87■□□□□ 0.45
PVT1-220ENST00000524165 NKD1Q969G9 470 aa17.87■□□□□ 0.45
PVT1-220ENST00000524165 FEM1CQ96JP0 617 aa17.87■□□□□ 0.45
PVT1-220ENST00000524165 PHF12Q96QT6 1004 aa17.87■□□□□ 0.45
PVT1-220ENST00000524165 KLF6Q99612 283 aaPredicted RBP17.87■□□□□ 0.45
PVT1-220ENST00000524165 SLC13A1Q9BZW2 595 aa17.87■□□□□ 0.45
PVT1-220ENST00000524165 CLPBQ9H078 707 aa17.87■□□□□ 0.45
PVT1-220ENST00000524165 GULP1Q9UBP9 304 aa17.87■□□□□ 0.45
PVT1-220ENST00000524165 XPO7Q9UIA9 1087 aaKnown RBP17.87■□□□□ 0.45
PVT1-220ENST00000524165 NAALADL1Q9UQQ1 740 aa17.87■□□□□ 0.45
PVT1-220ENST00000524165 FRMD4BQ9Y2L6 1034 aa17.87■□□□□ 0.45
PVT1-220ENST00000524165 VPS37CA5D8V6 355 aaPredicted RBP17.86■□□□□ 0.45
PVT1-220ENST00000524165 TCAF2A6NFQ2 919 aa17.86■□□□□ 0.45
PVT1-220ENST00000524165 MAPK13O15264 365 aa17.86■□□□□ 0.45
PVT1-220ENST00000524165 NR3C1P04150 777 aa17.86■□□□□ 0.45
PVT1-220ENST00000524165 TSHRP16473 764 aa17.86■□□□□ 0.45
PVT1-220ENST00000524165 ITGB7P26010 798 aa17.86■□□□□ 0.45
PVT1-220ENST00000524165 TNFRSF8P28908 595 aa17.86■□□□□ 0.45
PVT1-220ENST00000524165 GCLMP48507 274 aa17.86■□□□□ 0.45
PVT1-220ENST00000524165 PPP3CAQ08209 521 aa17.86■□□□□ 0.45
PVT1-220ENST00000524165 LVRNQ6Q4G3 990 aa17.86■□□□□ 0.45
PVT1-220ENST00000524165 OR2A12Q8NGT7 310 aa17.86■□□□□ 0.45
PVT1-220ENST00000524165 DQX1Q8TE96 717 aaKnown RBP17.86■□□□□ 0.45
PVT1-220ENST00000524165 SCG3Q8WXD2 468 aaKnown RBP17.86■□□□□ 0.45
PVT1-220ENST00000524165 PPP1R16AQ96I34 528 aa17.86■□□□□ 0.45
PVT1-220ENST00000524165 CDH19Q9H159 772 aa17.86■□□□□ 0.45
PVT1-220ENST00000524165 CUEDC1Q9NWM3 386 aaPredicted RBP17.86■□□□□ 0.45
PVT1-220ENST00000524165 SMC3Q9UQE7 1217 aa17.86■□□□□ 0.45
PVT1-220ENST00000524165 HS3ST2Q9Y278 367 aa17.86■□□□□ 0.45
PVT1-220ENST00000524165 ESPL1Q14674 2120 aa17.86■□□□□ 0.45
PVT1-220ENST00000524165 PVALEFA0A1B0GWK0 134 aa17.85■□□□□ 0.45
PVT1-220ENST00000524165 F5H5T6 163 aa17.85■□□□□ 0.45
PVT1-220ENST00000524165 M0QYT0 321 aa17.85■□□□□ 0.45
PVT1-220ENST00000524165 SPTLC2O15270 562 aa17.85■□□□□ 0.45
PVT1-220ENST00000524165 APOEP02649 317 aa17.85■□□□□ 0.45
PVT1-220ENST00000524165 RECQLP46063 649 aaPredicted RBP17.85■□□□□ 0.45
PVT1-220ENST00000524165 THOP1P52888 689 aa17.85■□□□□ 0.45
PVT1-220ENST00000524165 LACTB2Q53H82 288 aaPredicted RBP17.85■□□□□ 0.45
PVT1-220ENST00000524165 CEP135Q66GS9 1140 aa17.85■□□□□ 0.45
PVT1-220ENST00000524165 ZNF787Q6DD87 383 aa17.85■□□□□ 0.45
PVT1-220ENST00000524165 FSTL5Q8N475 847 aaPredicted RBP17.85■□□□□ 0.45
PVT1-220ENST00000524165 KYQ8NBH2 561 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms