RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 FSD1LQ9BXM9 530 aa26.28■■□□□ 1.8
COL13A1-214ENST00000522165 NT5MQ9NPB1 228 aa26.28■■□□□ 1.8
COL13A1-214ENST00000522165 ZNF840PA6NDX5 716 aa26.27■■□□□ 1.8
COL13A1-214ENST00000522165 H0YHG0 523 aa26.27■■□□□ 1.8
COL13A1-214ENST00000522165 RAMP2O60895 175 aa26.27■■□□□ 1.8
COL13A1-214ENST00000522165 GLRA3O75311 464 aa26.27■■□□□ 1.8
COL13A1-214ENST00000522165 DNAJC8O75937 253 aaPredicted RBP26.27■■□□□ 1.8
COL13A1-214ENST00000522165 HMGA1P17096 107 aaKnown RBP26.27■■□□□ 1.8
COL13A1-214ENST00000522165 RFC2P35250 354 aa26.27■■□□□ 1.8
COL13A1-214ENST00000522165 MAPKAPK2P49137 400 aa26.27■■□□□ 1.8
COL13A1-214ENST00000522165 OVGP1Q12889 678 aa26.27■■□□□ 1.8
COL13A1-214ENST00000522165 POU6F1Q14863 301 aa26.27■■□□□ 1.8
COL13A1-214ENST00000522165 POLD3Q15054 466 aaPredicted RBP26.27■■□□□ 1.8
COL13A1-214ENST00000522165 PARP15Q460N3 678 aa26.27■■□□□ 1.8
COL13A1-214ENST00000522165 PDPK2PQ6A1A2 396 aa26.27■■□□□ 1.8
COL13A1-214ENST00000522165 POTEHQ6S545 545 aa26.27■■□□□ 1.8
COL13A1-214ENST00000522165 KDELC1Q6UW63 502 aa26.27■■□□□ 1.8
COL13A1-214ENST00000522165 TEX26Q8N6G2 289 aa26.27■■□□□ 1.8
COL13A1-214ENST00000522165 ZNF398Q8TD17 642 aa26.27■■□□□ 1.8
COL13A1-214ENST00000522165 ZNF689Q96CS4 500 aaPredicted RBP26.27■■□□□ 1.8
COL13A1-214ENST00000522165 IMP4Q96G21 291 aaKnown RBP26.27■■□□□ 1.8
COL13A1-214ENST00000522165 KLHL5Q96PQ7 755 aa26.27■■□□□ 1.8
COL13A1-214ENST00000522165 IARS2Q9NSE4 1012 aaKnown RBP26.27■■□□□ 1.8
COL13A1-214ENST00000522165 HSFX1Q9UBD0 423 aa26.27■■□□□ 1.8
COL13A1-214ENST00000522165 BIRC5O15392 142 aa26.27■■□□□ 1.8
COL13A1-214ENST00000522165 MAGEA12P43365 314 aa26.27■■□□□ 1.8
COL13A1-214ENST00000522165 WNT3AP56704 352 aa26.27■■□□□ 1.8
COL13A1-214ENST00000522165 TNK2Q07912 1038 aa26.27■■□□□ 1.8
COL13A1-214ENST00000522165 DCLK2Q8N568 766 aa26.27■■□□□ 1.8
COL13A1-214ENST00000522165 ATP2A3Q93084 1043 aa26.27■■□□□ 1.8
COL13A1-214ENST00000522165 AZIN2Q96A70 460 aa26.27■■□□□ 1.8
COL13A1-214ENST00000522165 PABPC5Q96DU9 382 aaKnown RBP26.27■■□□□ 1.8
COL13A1-214ENST00000522165 MCMBPQ9BTE3 642 aa26.27■■□□□ 1.8
COL13A1-214ENST00000522165 DCDC2Q9UHG0 476 aa26.27■■□□□ 1.8
COL13A1-214ENST00000522165 BPGMP07738 259 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 TYK2P29597 1187 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 ALDH3A1P30838 453 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 CSE1LP55060 971 aaKnown RBP26.26■■□□□ 1.79
COL13A1-214ENST00000522165 DSG1Q02413 1049 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 BNIP1Q12981 228 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 SERINC3Q13530 473 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 C5orf22Q49AR2 442 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 FSTL4Q6MZW2 842 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 NUDCD3Q8IVD9 361 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 SLC39A11Q8N1S5 342 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 PPHLN1Q8NEY8 458 aaKnown RBP26.26■■□□□ 1.79
COL13A1-214ENST00000522165 PTCD2Q8WV60 388 aaKnown RBP26.26■■□□□ 1.79
COL13A1-214ENST00000522165 ZNF558Q96NG5 402 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 EMCNQ9ULC0 261 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 CCDC78A2IDD5 438 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 F5H5T6 163 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 ACSL4O60488 711 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 GJB5O95377 273 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 TGDSO95455 350 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 OR1E1P30953 314 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 YBEYP58557 167 aaPredicted RBP26.26■■□□□ 1.79
COL13A1-214ENST00000522165 IL10RBQ08334 325 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 HECTD3Q5T447 861 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 TPGS2Q68CL5 300 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 KLHDC10Q6PID8 442 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 TMCO2Q7Z6W1 182 aaPredicted RBP26.26■■□□□ 1.79
COL13A1-214ENST00000522165 ZNF354CQ86Y25 554 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 LGI2Q8N0V4 545 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 E2F7Q96AV8 911 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 MRM3Q9HC36 420 aaKnown RBP26.26■■□□□ 1.79
COL13A1-214ENST00000522165 SNX15Q9NRS6 342 aa26.26■■□□□ 1.79
COL13A1-214ENST00000522165 ABHD14A-ACY1A0A1B0GW23 586 aa26.25■■□□□ 1.79
COL13A1-214ENST00000522165 F7P08709 466 aaPredicted RBP26.25■■□□□ 1.79
COL13A1-214ENST00000522165 CLTBP09497 229 aa26.25■■□□□ 1.79
COL13A1-214ENST00000522165 SERPINB8P50452 374 aa26.25■■□□□ 1.79
COL13A1-214ENST00000522165 INSCQ1MX18 579 aa26.25■■□□□ 1.79
COL13A1-214ENST00000522165 PPM1JQ5JR12 505 aa26.25■■□□□ 1.79
COL13A1-214ENST00000522165 N4BP2L1Q5TBK1 243 aaPredicted RBP26.25■■□□□ 1.79
COL13A1-214ENST00000522165 ATG16L1Q676U5 607 aa26.25■■□□□ 1.79
COL13A1-214ENST00000522165 RFWD2Q8NHY2 731 aa26.25■■□□□ 1.79
COL13A1-214ENST00000522165 RAB3IL1Q8TBN0 382 aa26.25■■□□□ 1.79
COL13A1-214ENST00000522165 NSMCE1Q8WV22 266 aa26.25■■□□□ 1.79
COL13A1-214ENST00000522165 TMEM169Q96HH4 297 aa26.25■■□□□ 1.79
COL13A1-214ENST00000522165 TRIM55Q9BYV6 548 aa26.25■■□□□ 1.79
COL13A1-214ENST00000522165 NACA2Q9H009 215 aa26.25■■□□□ 1.79
COL13A1-214ENST00000522165 RC3H2Q9HBD1 1191 aaKnown RBP26.25■■□□□ 1.79
COL13A1-214ENST00000522165 CHKBQ9Y259 395 aa26.25■■□□□ 1.79
COL13A1-214ENST00000522165 TCAF1Q9Y4C2 921 aa26.25■■□□□ 1.79
COL13A1-214ENST00000522165 LTBP2Q14767 1821 aa26.25■■□□□ 1.79
COL13A1-214ENST00000522165 HGSO14964 777 aaPredicted RBP26.24■■□□□ 1.79
COL13A1-214ENST00000522165 SLC6A4P31645 630 aa26.24■■□□□ 1.79
COL13A1-214ENST00000522165 MAXP61244 160 aa26.24■■□□□ 1.79
COL13A1-214ENST00000522165 CHI3L2Q15782 390 aa26.24■■□□□ 1.79
COL13A1-214ENST00000522165 C16orf46Q6P387 395 aa26.24■■□□□ 1.79
COL13A1-214ENST00000522165 KDELC2Q7Z4H8 507 aa26.24■■□□□ 1.79
COL13A1-214ENST00000522165 ATXN7L3BQ96GX2 97 aa26.24■■□□□ 1.79
COL13A1-214ENST00000522165 MYRFLQ96LU7 910 aa26.24■■□□□ 1.79
COL13A1-214ENST00000522165 ATXN3LQ9H3M9 355 aa26.24■■□□□ 1.79
COL13A1-214ENST00000522165 CYP4F11Q9HBI6 524 aa26.24■■□□□ 1.79
COL13A1-214ENST00000522165 ARNT2Q9HBZ2 717 aa26.24■■□□□ 1.79
COL13A1-214ENST00000522165 VPS45Q9NRW7 570 aa26.24■■□□□ 1.79
COL13A1-214ENST00000522165 NSMCE4AQ9NXX6 385 aa26.24■■□□□ 1.79
COL13A1-214ENST00000522165 MTO1Q9Y2Z2 717 aaKnown RBP26.24■■□□□ 1.79
COL13A1-214ENST00000522165 GOLGA8TH3BQL2 631 aa26.24■■□□□ 1.79
COL13A1-214ENST00000522165 COCHO43405 550 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms