RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 DPH6Q7L8W6 267 aa18.02■□□□□ 0.48
NUP54-205ENST00000507257 HERC6Q8IVU3 1022 aa18.02■□□□□ 0.48
NUP54-205ENST00000507257 ZNF567Q8N184 647 aa18.02■□□□□ 0.48
NUP54-205ENST00000507257 KDM1BQ8NB78 822 aa18.02■□□□□ 0.48
NUP54-205ENST00000507257 AGR3Q8TD06 166 aa18.02■□□□□ 0.48
NUP54-205ENST00000507257 SNRNP27Q8WVK2 155 aaKnown RBP18.02■□□□□ 0.48
NUP54-205ENST00000507257 VPS39Q96JC1 886 aa18.02■□□□□ 0.48
NUP54-205ENST00000507257 COX4I2Q96KJ9 171 aa18.02■□□□□ 0.48
NUP54-205ENST00000507257 NPAS2Q99743 824 aa18.02■□□□□ 0.48
NUP54-205ENST00000507257 TRPV6Q9H1D0 765 aa18.02■□□□□ 0.48
NUP54-205ENST00000507257 C20orf96Q9NUD7 363 aaPredicted RBP18.02■□□□□ 0.48
NUP54-205ENST00000507257 VANGL2Q9ULK5 521 aa18.02■□□□□ 0.48
NUP54-205ENST00000507257 ZBTB42B2RXF5 422 aa18.02■□□□□ 0.47
NUP54-205ENST00000507257 GABBR2O75899 941 aa18.02■□□□□ 0.47
NUP54-205ENST00000507257 RAD17O75943 681 aa18.02■□□□□ 0.47
NUP54-205ENST00000507257 GOT1P17174 413 aa18.02■□□□□ 0.47
NUP54-205ENST00000507257 TFE3P19532 575 aaPredicted RBP18.02■□□□□ 0.47
NUP54-205ENST00000507257 MYF6P23409 242 aa18.02■□□□□ 0.47
NUP54-205ENST00000507257 STT3AP46977 705 aa18.02■□□□□ 0.47
NUP54-205ENST00000507257 PFKPQ01813 784 aa18.02■□□□□ 0.47
NUP54-205ENST00000507257 PAFAH1B3Q15102 231 aaKnown RBP18.02■□□□□ 0.47
NUP54-205ENST00000507257 DLG2Q15700 870 aa18.02■□□□□ 0.47
NUP54-205ENST00000507257 HSDL1Q3SXM5 330 aa18.02■□□□□ 0.47
NUP54-205ENST00000507257 PPP1R26Q5T8A7 1209 aaPredicted RBP18.02■□□□□ 0.47
NUP54-205ENST00000507257 SCUBE3Q8IX30 993 aa18.02■□□□□ 0.47
NUP54-205ENST00000507257 FAR2Q96K12 515 aa18.02■□□□□ 0.47
NUP54-205ENST00000507257 SLC29A1Q99808 456 aa18.02■□□□□ 0.47
NUP54-205ENST00000507257 TASP1Q9H6P5 420 aa18.02■□□□□ 0.47
NUP54-205ENST00000507257 LIN28AQ9H9Z2 209 aaKnown RBP18.02■□□□□ 0.47
NUP54-205ENST00000507257 ADA2Q9NZK5 511 aa18.02■□□□□ 0.47
NUP54-205ENST00000507257 TLK1Q9UKI8 766 aa18.02■□□□□ 0.47
NUP54-205ENST00000507257 ITGB1BP2Q9UKP3 347 aa18.02■□□□□ 0.47
NUP54-205ENST00000507257 ZBTB12Q9Y330 459 aaPredicted RBP18.02■□□□□ 0.47
NUP54-205ENST00000507257 E2F8A0AVK6 867 aa18.01■□□□□ 0.47
NUP54-205ENST00000507257 TK2O00142 265 aa18.01■□□□□ 0.47
NUP54-205ENST00000507257 WNT10BO00744 389 aa18.01■□□□□ 0.47
NUP54-205ENST00000507257 SDHDO14521 159 aa18.01■□□□□ 0.47
NUP54-205ENST00000507257 B4GALT5O43286 388 aa18.01■□□□□ 0.47
NUP54-205ENST00000507257 TGFB3P10600 412 aa18.01■□□□□ 0.47
NUP54-205ENST00000507257 ITGA7Q13683 1181 aa18.01■□□□□ 0.47
NUP54-205ENST00000507257 MTX3Q5HYI7 312 aa18.01■□□□□ 0.47
NUP54-205ENST00000507257 ARHGAP17Q68EM7 881 aa18.01■□□□□ 0.47
NUP54-205ENST00000507257 NXNQ6DKJ4 435 aa18.01■□□□□ 0.47
NUP54-205ENST00000507257 FAM45BPQ6NSW5 357 aa18.01■□□□□ 0.47
NUP54-205ENST00000507257 CES3Q6UWW8 571 aa18.01■□□□□ 0.47
NUP54-205ENST00000507257 ZNF354CQ86Y25 554 aa18.01■□□□□ 0.47
NUP54-205ENST00000507257 MYO1HQ8N1T3 1032 aa18.01■□□□□ 0.47
NUP54-205ENST00000507257 GOLM1Q8NBJ4 401 aa18.01■□□□□ 0.47
NUP54-205ENST00000507257 FAM45AQ8TCE6 357 aa18.01■□□□□ 0.47
NUP54-205ENST00000507257 C12orf43Q96C57 262 aaKnown RBP18.01■□□□□ 0.47
NUP54-205ENST00000507257 ITPKCQ96DU7 683 aa18.01■□□□□ 0.47
NUP54-205ENST00000507257 AGAP2Q99490 1192 aa18.01■□□□□ 0.47
NUP54-205ENST00000507257 SPAG4Q9NPE6 437 aa18.01■□□□□ 0.47
NUP54-205ENST00000507257 PRMT7Q9NVM4 692 aaPredicted RBP18.01■□□□□ 0.47
NUP54-205ENST00000507257 CACNA2D2Q9NY47 1150 aa18.01■□□□□ 0.47
NUP54-205ENST00000507257 FZD10Q9ULW2 581 aa18.01■□□□□ 0.47
NUP54-205ENST00000507257 RAD54BQ9Y620 910 aa18.01■□□□□ 0.47
NUP54-205ENST00000507257 ZSWIM8A7E2V4 1837 aa18■□□□□ 0.47
NUP54-205ENST00000507257 INO80B-WBP1J3KQ70 363 aa18■□□□□ 0.47
NUP54-205ENST00000507257 DNAJB2P25686 324 aa18■□□□□ 0.47
NUP54-205ENST00000507257 NPY2RP49146 381 aa18■□□□□ 0.47
NUP54-205ENST00000507257 NAGLUP54802 743 aa18■□□□□ 0.47
NUP54-205ENST00000507257 POU5F1BQ06416 359 aa18■□□□□ 0.47
NUP54-205ENST00000507257 SQLEQ14534 574 aa18■□□□□ 0.47
NUP54-205ENST00000507257 C16orf72Q14CZ0 275 aa18■□□□□ 0.47
NUP54-205ENST00000507257 SAMD4BQ5PRF9 694 aaKnown RBP18■□□□□ 0.47
NUP54-205ENST00000507257 BSPRYQ5W0U4 402 aa18■□□□□ 0.47
NUP54-205ENST00000507257 HMBOX1Q6NT76 420 aa18■□□□□ 0.47
NUP54-205ENST00000507257 C8orf82Q6P1X6 216 aaPredicted RBP18■□□□□ 0.47
NUP54-205ENST00000507257 ZBTB49Q6ZSB9 765 aa18■□□□□ 0.47
NUP54-205ENST00000507257 KCNMB4Q86W47 210 aa18■□□□□ 0.47
NUP54-205ENST00000507257 CCDC185Q8N715 623 aa18■□□□□ 0.47
NUP54-205ENST00000507257 C12orf29Q8N999 325 aa18■□□□□ 0.47
NUP54-205ENST00000507257 OR52K1Q8NGK4 314 aa18■□□□□ 0.47
NUP54-205ENST00000507257 GIPC3Q8TF64 312 aa18■□□□□ 0.47
NUP54-205ENST00000507257 LPGAT1Q92604 370 aa18■□□□□ 0.47
NUP54-205ENST00000507257 CNDP2Q96KP4 475 aaKnown RBP18■□□□□ 0.47
NUP54-205ENST00000507257 PHF12Q96QT6 1004 aa18■□□□□ 0.47
NUP54-205ENST00000507257 RHOJQ9H4E5 214 aa18■□□□□ 0.47
NUP54-205ENST00000507257 CAB39LQ9H9S4 337 aa18■□□□□ 0.47
NUP54-205ENST00000507257 AS3MTQ9HBK9 375 aa18■□□□□ 0.47
NUP54-205ENST00000507257 PIH1D1Q9NWS0 290 aaKnown RBP18■□□□□ 0.47
NUP54-205ENST00000507257 ARHGEF38Q9NXL2 777 aa18■□□□□ 0.47
NUP54-205ENST00000507257 CNOT6Q9ULM6 557 aaKnown RBP18■□□□□ 0.47
NUP54-205ENST00000507257 MFHAS1Q9Y4C4 1052 aa18■□□□□ 0.47
NUP54-205ENST00000507257 AFG3L2Q9Y4W6 797 aa18■□□□□ 0.47
NUP54-205ENST00000507257 E7ENX8 843 aa18■□□□□ 0.47
NUP54-205ENST00000507257 DCKP27707 260 aa18■□□□□ 0.47
NUP54-205ENST00000507257 DNAJB13P59910 316 aa18■□□□□ 0.47
NUP54-205ENST00000507257 ZBTB17Q13105 803 aa18■□□□□ 0.47
NUP54-205ENST00000507257 TNFAIP1Q13829 316 aa18■□□□□ 0.47
NUP54-205ENST00000507257 TMEM132DQ14C87 1099 aa18■□□□□ 0.47
NUP54-205ENST00000507257 TMEM132AQ24JP5 1023 aa18■□□□□ 0.47
NUP54-205ENST00000507257 GLRA4Q5JXX5 417 aa18■□□□□ 0.47
NUP54-205ENST00000507257 KCTD11Q693B1 232 aa18■□□□□ 0.47
NUP54-205ENST00000507257 METTL7BQ6UX53 244 aa18■□□□□ 0.47
NUP54-205ENST00000507257 ERMP1Q7Z2K6 904 aa18■□□□□ 0.47
NUP54-205ENST00000507257 PIWIL4Q7Z3Z4 852 aaKnown RBP18■□□□□ 0.47
NUP54-205ENST00000507257 CLVS1Q8IUQ0 354 aaPredicted RBP18■□□□□ 0.47
NUP54-205ENST00000507257 ADAM32Q8TC27 787 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms