RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 SNRPD1P62314 119 aaKnown RBP16.29■□□□□ 0.2
SSBP1-214ENST00000498107 TAZQ16635 292 aa16.29■□□□□ 0.2
SSBP1-214ENST00000498107 KIAA1324Q6UXG2 1013 aaKnown RBP16.29■□□□□ 0.2
SSBP1-214ENST00000498107 BBS5Q8N3I7 341 aa16.29■□□□□ 0.2
SSBP1-214ENST00000498107 ZBTB44Q8NCP5 570 aa16.29■□□□□ 0.2
SSBP1-214ENST00000498107 ATOH1Q92858 354 aaPredicted RBP16.29■□□□□ 0.2
SSBP1-214ENST00000498107 HES6Q96HZ4 224 aa16.29■□□□□ 0.2
SSBP1-214ENST00000498107 SPACA7Q96KW9 195 aa16.29■□□□□ 0.2
SSBP1-214ENST00000498107 MRGPRX1Q96LB2 322 aa16.29■□□□□ 0.2
SSBP1-214ENST00000498107 RSPH9Q9H1X1 276 aaPredicted RBP16.29■□□□□ 0.2
SSBP1-214ENST00000498107 HAUS2Q9NVX0 235 aa16.29■□□□□ 0.2
SSBP1-214ENST00000498107 EFR3BQ9Y2G0 817 aa16.29■□□□□ 0.2
SSBP1-214ENST00000498107 K7ERQ8 282 aa16.28■□□□□ 0.2
SSBP1-214ENST00000498107 MCF2LO15068 1137 aa16.28■□□□□ 0.2
SSBP1-214ENST00000498107 SMAD6O43541 496 aaKnown RBP16.28■□□□□ 0.2
SSBP1-214ENST00000498107 MFSD11O43934 449 aa16.28■□□□□ 0.2
SSBP1-214ENST00000498107 CD160O95971 181 aa16.28■□□□□ 0.2
SSBP1-214ENST00000498107 GSRP00390 522 aa16.28■□□□□ 0.2
SSBP1-214ENST00000498107 DNTTP04053 509 aa16.28■□□□□ 0.2
SSBP1-214ENST00000498107 C7P10643 843 aa16.28■□□□□ 0.2
SSBP1-214ENST00000498107 TGM2P21980 687 aa16.28■□□□□ 0.2
SSBP1-214ENST00000498107 MSNP26038 577 aaKnown RBP16.28■□□□□ 0.2
SSBP1-214ENST00000498107 PTPN7P35236 360 aa16.28■□□□□ 0.2
SSBP1-214ENST00000498107 MARCKSL1P49006 195 aa16.28■□□□□ 0.2
SSBP1-214ENST00000498107 PXNP49023 591 aaPredicted RBP16.28■□□□□ 0.2
SSBP1-214ENST00000498107 NR2C2P49116 596 aa16.28■□□□□ 0.2
SSBP1-214ENST00000498107 DNA2P51530 1060 aa16.28■□□□□ 0.2
SSBP1-214ENST00000498107 RENBPP51606 427 aa16.28■□□□□ 0.2
SSBP1-214ENST00000498107 COPAP53621 1224 aa16.28■□□□□ 0.2
SSBP1-214ENST00000498107 GALNT2Q10471 571 aa16.28■□□□□ 0.2
SSBP1-214ENST00000498107 TTC31Q49AM3 519 aaPredicted RBP16.28■□□□□ 0.2
SSBP1-214ENST00000498107 CARD16Q5EG05 197 aa16.28■□□□□ 0.2
SSBP1-214ENST00000498107 FAM46CQ5VWP2 391 aa16.28■□□□□ 0.2
SSBP1-214ENST00000498107 TIGD7Q6NT04 549 aaPredicted RBP16.28■□□□□ 0.2
SSBP1-214ENST00000498107 Q6ZVU0 165 aa16.28■□□□□ 0.2
SSBP1-214ENST00000498107 MKRN2Q9H000 416 aaKnown RBP16.28■□□□□ 0.2
SSBP1-214ENST00000498107 BRD8Q9H0E9 1235 aa16.28■□□□□ 0.2
SSBP1-214ENST00000498107 PDFQ9HBH1 243 aa16.28■□□□□ 0.2
SSBP1-214ENST00000498107 FCF1Q9Y324 198 aaKnown RBP16.28■□□□□ 0.2
SSBP1-214ENST00000498107 MFHAS1Q9Y4C4 1052 aa16.28■□□□□ 0.2
SSBP1-214ENST00000498107 hCG_1818297A0A087WSY0 165 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 C1QTNF3-AMACRE9PGA6 284 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 J3KR12 359 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 PPP1R12AO14974 1030 aaPredicted RBP16.27■□□□□ 0.2
SSBP1-214ENST00000498107 BNIP3LO60238 219 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 CST8O60676 142 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 TMCC1O94876 653 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 IGSF6O95976 241 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 ADH1BP00325 375 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 PRNPP04156 253 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 HSPA9P38646 679 aaKnown RBP16.27■□□□□ 0.2
SSBP1-214ENST00000498107 PLA2G5P39877 138 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 GARSP41250 739 aaKnown RBP16.27■□□□□ 0.2
SSBP1-214ENST00000498107 RHOAP61586 193 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 RAD51Q06609 339 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 DMWDQ09019 674 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 PDK1Q15118 436 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 RPS6KA1Q15418 735 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 KAZNQ674X7 775 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 STK40Q8N2I9 435 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 PLD5Q8N7P1 536 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 GAB3Q8WWW8 586 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 ERLEC1Q96DZ1 483 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 LRIG1Q96JA1 1093 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 GDAP1L1Q96MZ0 367 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 TSGA13Q96PP4 275 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 TPSD1Q9BZJ3 242 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 SEMA4AQ9H3S1 761 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 MTG2Q9H4K7 406 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 NCKAP1Q9Y2A7 1128 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 HEY1Q9Y5J3 304 aa16.27■□□□□ 0.2
SSBP1-214ENST00000498107 NYNRINQ9P2P1 1898 aaKnown RBP16.27■□□□□ 0.19
SSBP1-214ENST00000498107 MAFKO60675 156 aa16.26■□□□□ 0.19
SSBP1-214ENST00000498107 LILRB5O75023 590 aa16.26■□□□□ 0.19
SSBP1-214ENST00000498107 RPP40O75818 363 aaKnown RBP16.26■□□□□ 0.19
SSBP1-214ENST00000498107 TJP3O95049 919 aa16.26■□□□□ 0.19
SSBP1-214ENST00000498107 IL1BP01584 269 aa16.26■□□□□ 0.19
SSBP1-214ENST00000498107 VAV1P15498 845 aa16.26■□□□□ 0.19
SSBP1-214ENST00000498107 C5AR1P21730 350 aa16.26■□□□□ 0.19
SSBP1-214ENST00000498107 CCNCP24863 283 aa16.26■□□□□ 0.19
SSBP1-214ENST00000498107 OXTRP30559 389 aa16.26■□□□□ 0.19
SSBP1-214ENST00000498107 CHRNA3P32297 505 aa16.26■□□□□ 0.19
SSBP1-214ENST00000498107 RPS14P62263 151 aaKnown RBP16.26■□□□□ 0.19
SSBP1-214ENST00000498107 DYNLT1P63172 113 aa16.26■□□□□ 0.19
SSBP1-214ENST00000498107 GBE1Q04446 702 aa16.26■□□□□ 0.19
SSBP1-214ENST00000498107 ZNF33AQ06730 810 aa16.26■□□□□ 0.19
SSBP1-214ENST00000498107 CCDC15Q0P6D6 951 aa16.26■□□□□ 0.19
SSBP1-214ENST00000498107 LBRQ14739 615 aaKnown RBP16.26■□□□□ 0.19
SSBP1-214ENST00000498107 GRM3Q14832 879 aa16.26■□□□□ 0.19
SSBP1-214ENST00000498107 CST6Q15828 149 aa16.26■□□□□ 0.19
SSBP1-214ENST00000498107 MEI1Q5TIA1 1274 aa16.26■□□□□ 0.19
SSBP1-214ENST00000498107 CCDC181Q5TID7 509 aa16.26■□□□□ 0.19
SSBP1-214ENST00000498107 LEKR1Q6ZMV7 388 aa16.26■□□□□ 0.19
SSBP1-214ENST00000498107 KBTBD6Q86V97 674 aa16.26■□□□□ 0.19
SSBP1-214ENST00000498107 MMAAQ8IVH4 418 aaKnown RBP16.26■□□□□ 0.19
SSBP1-214ENST00000498107 TMIEQ8NEW7 156 aa16.26■□□□□ 0.19
SSBP1-214ENST00000498107 OR2AP1Q8NGE2 309 aa16.26■□□□□ 0.19
SSBP1-214ENST00000498107 OR2A12Q8NGT7 310 aa16.26■□□□□ 0.19
SSBP1-214ENST00000498107 ALG3Q92685 438 aa16.26■□□□□ 0.19
SSBP1-214ENST00000498107 P3H4Q92791 437 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms