RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 CIITAP33076 1130 aa5.81□□□□□ -1.48
SSR3-208ENST00000496050 CPOXP36551 454 aa5.81□□□□□ -1.48
SSR3-208ENST00000496050 CPA2P48052 419 aa5.81□□□□□ -1.48
SSR3-208ENST00000496050 DRG2P55039 364 aaKnown RBP5.81□□□□□ -1.48
SSR3-208ENST00000496050 YWHAZP63104 245 aaKnown RBP5.81□□□□□ -1.48
SSR3-208ENST00000496050 RPE65Q16518 533 aa5.81□□□□□ -1.48
SSR3-208ENST00000496050 CCNG2Q16589 344 aa5.81□□□□□ -1.48
SSR3-208ENST00000496050 GSTA3Q16772 222 aa5.81□□□□□ -1.48
SSR3-208ENST00000496050 KIAA1755Q5JYT7 1200 aa5.81□□□□□ -1.48
SSR3-208ENST00000496050 SNX30Q5VWJ9 437 aa5.81□□□□□ -1.48
SSR3-208ENST00000496050 AAGABQ6PD74 315 aa5.81□□□□□ -1.48
SSR3-208ENST00000496050 CCDC129Q6ZRS4 1044 aa5.81□□□□□ -1.48
SSR3-208ENST00000496050 PLD5Q8N7P1 536 aa5.81□□□□□ -1.48
SSR3-208ENST00000496050 KLHL29Q96CT2 875 aa5.81□□□□□ -1.48
SSR3-208ENST00000496050 KLHL15Q96M94 604 aa5.81□□□□□ -1.48
SSR3-208ENST00000496050 HIPK3Q9H422 1215 aa5.81□□□□□ -1.48
SSR3-208ENST00000496050 PRKRIP1Q9H875 184 aaPredicted RBP5.81□□□□□ -1.48
SSR3-208ENST00000496050 MOV10Q9HCE1 1003 aaKnown RBP5.81□□□□□ -1.48
SSR3-208ENST00000496050 RABGAP1Q9Y3P9 1069 aa5.81□□□□□ -1.48
SSR3-208ENST00000496050 PIAS3Q9Y6X2 628 aa5.81□□□□□ -1.48
SSR3-208ENST00000496050 RSF1Q96T23 1441 aaPredicted RBP5.81□□□□□ -1.48
SSR3-208ENST00000496050 WDR17Q8IZU2 1322 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.8□□□□□ -1.48
SSR3-208ENST00000496050 A0A1W2PQM1 296 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 PABPN1LA6NDY0 278 aaKnown RBP5.8□□□□□ -1.48
SSR3-208ENST00000496050 NPIPB15A6NHN6 443 aaPredicted RBP5.8□□□□□ -1.48
SSR3-208ENST00000496050 DOK2O60496 412 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 DDAH2O95865 285 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 FSHBP01225 129 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 LAMP2P13473 410 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 NFKBIAP25963 317 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 BSGP35613 385 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 KLF10Q13118 480 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 KCTD2Q14681 263 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 ZNF667Q5HYK9 610 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 MEX3CQ5U5Q3 659 aaKnown RBP5.8□□□□□ -1.48
SSR3-208ENST00000496050 FAM205BPQ63HN1 556 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 ATG9BQ674R7 924 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 ISM2Q6H9L7 571 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 FBXO42Q6P3S6 717 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 FAM57BQ71RH2 274 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 PXKQ7Z7A4 578 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 GGNQ86UU5 652 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 CNTROBQ8N137 903 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 BOLLQ8N9W6 283 aaKnown RBP5.8□□□□□ -1.48
SSR3-208ENST00000496050 HASPINQ8TF76 798 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 GDPD5Q8WTR4 605 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 HDAC7Q8WUI4 952 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 USP6NLQ92738 828 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 CLMNQ96JQ2 1002 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 FAM118BQ9BPY3 351 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 LBHD1Q9BQE6 289 aaPredicted RBP5.8□□□□□ -1.48
SSR3-208ENST00000496050 FRMD8Q9BZ67 464 aaPredicted RBP5.8□□□□□ -1.48
SSR3-208ENST00000496050 RIOX1Q9H6W3 641 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 ZNF304Q9HCX3 659 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 KIAA1456Q9P272 454 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 LAMP3Q9UQV4 416 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.8□□□□□ -1.48
SSR3-208ENST00000496050 SLC45A1Q9Y2W3 748 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 LYVE1Q9Y5Y7 322 aa5.8□□□□□ -1.48
SSR3-208ENST00000496050 ZNF335Q9H4Z2 1342 aaPredicted RBP5.79□□□□□ -1.48
SSR3-208ENST00000496050 C2CD4BA6NLJ0 364 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 FAM157AC9JC47 383 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 PTP4A3O75365 173 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 TACC1O75410 805 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 TUBB4AP04350 444 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 PRKCGP05129 697 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 IRF1P10914 325 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 ALOX12P18054 663 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 YWHAQP27348 245 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 RGS2P41220 211 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 ARSFP54793 590 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 GHRHRQ02643 423 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 PMPCAQ10713 525 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 PGM5Q15124 567 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 TAF11Q15544 211 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 SLC9C1Q4G0N8 1177 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 TTC39AQ5SRH9 613 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 LCE3BQ5TA77 95 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 CDC73Q6P1J9 531 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 PTF1AQ7RTS3 328 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 FAM160B2Q86V87 743 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 WDR5BQ86VZ2 330 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 CCDC25Q86WR0 208 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 RPAP2Q8IXW5 612 aaPredicted RBP5.79□□□□□ -1.48
SSR3-208ENST00000496050 PDILTQ8N807 584 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 FAM98AQ8NCA5 519 aaKnown RBP5.79□□□□□ -1.48
SSR3-208ENST00000496050 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.79□□□□□ -1.48
SSR3-208ENST00000496050 KAT2AQ92830 837 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 CCDC68Q9H2F9 335 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 ACTR5Q9H9F9 607 aaPredicted RBP5.79□□□□□ -1.48
SSR3-208ENST00000496050 HAUS2Q9NVX0 235 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 NSMCE4AQ9NXX6 385 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 GPR34Q9UPC5 381 aa5.79□□□□□ -1.48
SSR3-208ENST00000496050 COL11A2P13942 1736 aaPredicted RBP5.79□□□□□ -1.48
SSR3-208ENST00000496050 WDR33Q9C0J8 1336 aaKnown RBP5.78□□□□□ -1.48
SSR3-208ENST00000496050 A6NCN8 305 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 LINC01548A6NM66 108 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 GTPBP1O00178 669 aaKnown RBP5.78□□□□□ -1.48
SSR3-208ENST00000496050 AP3D1O14617 1153 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms