RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 PIRTP0C851 137 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 MSL3P1P0C860 447 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 CHRNB1P11230 501 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 PROZP22891 400 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 DNAJB2P25686 324 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 KLRC2P26717 231 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 GRK4P32298 578 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 WDR4P57081 412 aaKnown RBP12.54□□□□□ -0.4
USP11-206ENST00000469080 AP2B1P63010 937 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 SLC10A2Q12908 348 aaPredicted RBP12.54□□□□□ -0.4
USP11-206ENST00000469080 POU6F1Q14863 301 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 SF3B4Q15427 424 aaKnown RBP eCLIP12.54□□□□□ -0.43e-7■■■■■ 27.5
USP11-206ENST00000469080 SLC39A12Q504Y0 691 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 TJAP1Q5JTD0 557 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 MAP3K21Q5TCX8 1036 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 NXNQ6DKJ4 435 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 ZNF410Q86VK4 478 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 ARID3BQ8IVW6 561 aaPredicted RBP12.54□□□□□ -0.4
USP11-206ENST00000469080 OR6Y1Q8NGX8 325 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 NEURL2Q9BR09 285 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 GPBP1L1Q9HC44 474 aaPredicted RBP12.54□□□□□ -0.4
USP11-206ENST00000469080 RPL26L1Q9UNX3 145 aaKnown RBP12.54□□□□□ -0.4
USP11-206ENST00000469080 SLC15A5A6NIM6 579 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 K7EPI3 171 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 NEMP1O14524 444 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 TBX18O95935 607 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 MT-CO1P00395 513 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 IRF1P10914 325 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 SERPINB6P35237 376 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 SOX11P35716 441 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 GSSP48637 474 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 RPL10AP62906 217 aaKnown RBP12.54□□□□□ -0.4
USP11-206ENST00000469080 POU5F1BQ06416 359 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 DLG1Q12959 904 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 SPIDRQ14159 915 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 ANKRD52Q8NB46 1076 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 ATAD1Q8NBU5 361 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 C3orf58Q8NDZ4 430 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 SHCBP1Q8NEM2 672 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 GIPC2Q8TF65 315 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 TFB1MQ8WVM0 346 aaKnown RBP12.54□□□□□ -0.4
USP11-206ENST00000469080 BTBD10Q9BSF8 475 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 BCO2Q9BYV7 579 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 APPL1Q9UKG1 709 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 PACSIN3Q9UKS6 424 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 ARL5CA6NH57 179 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 TADA2AO75478 443 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 FUCA1P04066 466 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 NCF2P19878 526 aaPredicted RBP12.54□□□□□ -0.4
USP11-206ENST00000469080 TYK2P29597 1187 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 GATMP50440 423 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 ALDH18A1P54886 795 aaKnown RBP12.54□□□□□ -0.4
USP11-206ENST00000469080 ADAM17P78536 824 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 OASLQ15646 514 aaKnown RBP12.54□□□□□ -0.4
USP11-206ENST00000469080 GRAMD1BQ3KR37 738 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 TIGD5Q53EQ6 642 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 LPCAT4Q643R3 524 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 PAOXQ6QHF9 649 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 RNF19BQ6ZMZ0 732 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 SYDE1Q6ZW31 735 aaPredicted RBP12.54□□□□□ -0.4
USP11-206ENST00000469080 CMC1Q7Z7K0 106 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 CROCCP2Q86T23 111 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 SPATA2LQ8IUW3 424 aaPredicted RBP12.54□□□□□ -0.4
USP11-206ENST00000469080 SPERTQ8NA61 448 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 CALML6Q8TD86 181 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 PRICKLE1Q96MT3 831 aaPredicted RBP12.54□□□□□ -0.4
USP11-206ENST00000469080 CSPG4P5Q96PW8 444 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 CAB39LQ9H9S4 337 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 CYP4F11Q9HBI6 524 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 ZNF358Q9NW07 568 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 KIAA1257Q9ULG3 409 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 C15orf38-AP3S2A0A0A6YYH1 394 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 LOC100653049A0A140TA62 436 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 IQANK1A0A1B0GTG1 560 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 MYOCOSA0A1B0GUC4 107 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 PQBP1O60828 265 aaKnown RBP12.53□□□□□ -0.4
USP11-206ENST00000469080 GPR32O75388 356 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 KRT34O76011 436 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 UBL4AP11441 157 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 NPR3P17342 541 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 ERCC2P18074 760 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 GPR15P49685 360 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 EFEMP1Q12805 493 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 CCDC81Q6ZN84 652 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 ARPINQ7Z6K5 226 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 ZBTB46Q86UZ6 589 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 NUDCD3Q8IVD9 361 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 DCUN1D5Q9BTE7 237 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 ROPN1BQ9BZX4 212 aaPredicted RBP12.53□□□□□ -0.4
USP11-206ENST00000469080 ROPN1Q9HAT0 212 aaPredicted RBP12.53□□□□□ -0.4
USP11-206ENST00000469080 FBXO6Q9NRD1 293 aaPredicted RBP12.53□□□□□ -0.4
USP11-206ENST00000469080 PIGVQ9NUD9 493 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 PAK5Q9P286 719 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 DMTF1Q9Y222 760 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 KIF13BQ9NQT8 1826 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 PFKMP08237 780 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 VCLP18206 1134 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 PFKPQ01813 784 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 GEN1Q17RS7 908 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 PPM1JQ5JR12 505 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms