RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 CETN3O15182 167 aa17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 SMAD6O43541 496 aaKnown RBP17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 GCATO75600 419 aa17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 PAK4O96013 591 aaPredicted RBP17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 F13A1P00488 732 aa17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 FAM87AP0C7U9 286 aa17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 ZSCAN22P10073 491 aaPredicted RBP17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 CMA1P23946 247 aa17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 SLC5A2P31639 672 aa17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 OXCT1P55809 520 aa17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 DNM1Q05193 864 aaKnown RBP17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 EIF2B5Q13144 721 aaKnown RBP17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 STILQ15468 1287 aa17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 TAF5Q15542 800 aa17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 RABGAP1LQ5R372 815 aa17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 XKR5Q6UX68 686 aa17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 ERN2Q76MJ5 926 aaKnown RBP17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 B3GNT8Q7Z7M8 397 aa17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 FAM174AQ8TBP5 190 aa17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 LMX1AQ8TE12 382 aa17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 SLC35C1Q96A29 364 aa17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 SGF29Q96ES7 293 aa17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 KLF6Q99612 283 aaPredicted RBP17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 SLC17A9Q9BYT1 436 aa17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 VPS28Q9UK41 221 aa17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 PCDHGA7Q9Y5G6 932 aa17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 K7ELQ4 463 aaPredicted RBP17.58■□□□□ 0.4
UBE2D4-209ENST00000454428 NTN3O00634 580 aaPredicted RBP17.58■□□□□ 0.4
UBE2D4-209ENST00000454428 TPP1O14773 563 aa17.58■□□□□ 0.4
UBE2D4-209ENST00000454428 SART1O43290 800 aaKnown RBP17.58■□□□□ 0.4
UBE2D4-209ENST00000454428 SNAP91O60641 907 aa17.58■□□□□ 0.4
UBE2D4-209ENST00000454428 ITGB2P05107 769 aa17.58■□□□□ 0.4
UBE2D4-209ENST00000454428 JUNDP17535 347 aa17.58■□□□□ 0.4
UBE2D4-209ENST00000454428 GGCXP38435 758 aa17.58■□□□□ 0.4
UBE2D4-209ENST00000454428 AUHQ13825 339 aaKnown RBP17.58■□□□□ 0.4
UBE2D4-209ENST00000454428 ARSIQ5FYB1 569 aa17.58■□□□□ 0.4
UBE2D4-209ENST00000454428 DENND1BQ6P3S1 775 aa17.58■□□□□ 0.4
UBE2D4-209ENST00000454428 ZNF574Q6ZN55 896 aaPredicted RBP17.58■□□□□ 0.4
UBE2D4-209ENST00000454428 C14orf80Q86SX3 495 aa17.58■□□□□ 0.4
UBE2D4-209ENST00000454428 RBFAQ8N0V3 343 aa17.58■□□□□ 0.4
UBE2D4-209ENST00000454428 LIN37Q96GY3 246 aaPredicted RBP17.58■□□□□ 0.4
UBE2D4-209ENST00000454428 RPRD1AQ96P16 312 aaPredicted RBP17.58■□□□□ 0.4
UBE2D4-209ENST00000454428 SLC4A5Q9BY07 1137 aa17.58■□□□□ 0.4
UBE2D4-209ENST00000454428 POPDC2Q9HBU9 364 aa17.58■□□□□ 0.4
UBE2D4-209ENST00000454428 ST7Q9NRC1 585 aa17.58■□□□□ 0.4
UBE2D4-209ENST00000454428 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.58■□□□□ 0.4
UBE2D4-209ENST00000454428 ANKMY1Q9P2S6 941 aa17.58■□□□□ 0.4
UBE2D4-209ENST00000454428 ACSL6Q9UKU0 697 aa17.58■□□□□ 0.4
UBE2D4-209ENST00000454428 TBC1D30Q9Y2I9 924 aa17.58■□□□□ 0.4
UBE2D4-209ENST00000454428 USP9YO00507 2555 aaPredicted RBP17.58■□□□□ 0.4
UBE2D4-209ENST00000454428 H3BM21 787 aa17.57■□□□□ 0.4
UBE2D4-209ENST00000454428 RIOK3O14730 519 aaKnown RBP17.57■□□□□ 0.4
UBE2D4-209ENST00000454428 SLC16A3O15427 465 aaKnown RBP17.57■□□□□ 0.4
UBE2D4-209ENST00000454428 ZNF821O75541 412 aaPredicted RBP17.57■□□□□ 0.4
UBE2D4-209ENST00000454428 AFPP02771 609 aaKnown RBP17.57■□□□□ 0.4
UBE2D4-209ENST00000454428 RRM1P23921 792 aa17.57■□□□□ 0.4
UBE2D4-209ENST00000454428 RABIFP47224 123 aa17.57■□□□□ 0.4
UBE2D4-209ENST00000454428 NDUFA8P51970 172 aa17.57■□□□□ 0.4
UBE2D4-209ENST00000454428 YWHAZP63104 245 aaKnown RBP17.57■□□□□ 0.4
UBE2D4-209ENST00000454428 MAPK8IP2Q13387 824 aaPredicted RBP17.57■□□□□ 0.4
UBE2D4-209ENST00000454428 PKP1Q13835 747 aa17.57■□□□□ 0.4
UBE2D4-209ENST00000454428 PDE1CQ14123 709 aaPredicted RBP17.57■□□□□ 0.4
UBE2D4-209ENST00000454428 ATL3Q6DD88 541 aa17.57■□□□□ 0.4
UBE2D4-209ENST00000454428 USP53Q70EK8 1073 aa17.57■□□□□ 0.4
UBE2D4-209ENST00000454428 LMO3Q8TAP4 145 aa17.57■□□□□ 0.4
UBE2D4-209ENST00000454428 GRIN3AQ8TCU5 1115 aa17.57■□□□□ 0.4
UBE2D4-209ENST00000454428 SEMA3CQ99985 751 aa17.57■□□□□ 0.4
UBE2D4-209ENST00000454428 CCDC3Q9BQI4 270 aa17.57■□□□□ 0.4
UBE2D4-209ENST00000454428 VPS51Q9UID3 782 aa17.57■□□□□ 0.4
UBE2D4-209ENST00000454428 RABGEF1Q9UJ41 708 aa17.57■□□□□ 0.4
UBE2D4-209ENST00000454428 VANGL2Q9ULK5 521 aa17.57■□□□□ 0.4
UBE2D4-209ENST00000454428 FADS3Q9Y5Q0 445 aa17.57■□□□□ 0.4
UBE2D4-209ENST00000454428 HS3ST4Q9Y661 456 aa17.57■□□□□ 0.4
UBE2D4-209ENST00000454428 WASF2Q9Y6W5 498 aa17.57■□□□□ 0.4
UBE2D4-209ENST00000454428 FAM237AA0A1B0GTK4 181 aa17.56■□□□□ 0.4
UBE2D4-209ENST00000454428 E5RJQ4 531 aa17.56■□□□□ 0.4
UBE2D4-209ENST00000454428 PLD2O14939 933 aa17.56■□□□□ 0.4
UBE2D4-209ENST00000454428 CNTN5O94779 1100 aa17.56■□□□□ 0.4
UBE2D4-209ENST00000454428 GJB6O95452 261 aa17.56■□□□□ 0.4
UBE2D4-209ENST00000454428 PRNPP04156 253 aa17.56■□□□□ 0.4
UBE2D4-209ENST00000454428 WT1P19544 449 aaPredicted RBP17.56■□□□□ 0.4
UBE2D4-209ENST00000454428 UGT1A5P35504 534 aa17.56■□□□□ 0.4
UBE2D4-209ENST00000454428 PMS1P54277 932 aaKnown RBP17.56■□□□□ 0.4
UBE2D4-209ENST00000454428 PFN3P60673 137 aa17.56■□□□□ 0.4
UBE2D4-209ENST00000454428 RPS21P63220 83 aaKnown RBP17.56■□□□□ 0.4
UBE2D4-209ENST00000454428 C5orf22Q49AR2 442 aa17.56■□□□□ 0.4
UBE2D4-209ENST00000454428 TMEM110Q86TL2 294 aa17.56■□□□□ 0.4
UBE2D4-209ENST00000454428 ATP11CQ8NB49 1132 aa17.56■□□□□ 0.4
UBE2D4-209ENST00000454428 CCDC47Q96A33 483 aaKnown RBP17.56■□□□□ 0.4
UBE2D4-209ENST00000454428 PPP1R9BQ96SB3 815 aa17.56■□□□□ 0.4
UBE2D4-209ENST00000454428 IL12RB2Q99665 862 aa17.56■□□□□ 0.4
UBE2D4-209ENST00000454428 TNKS2Q9H2K2 1166 aa17.56■□□□□ 0.4
UBE2D4-209ENST00000454428 LEFTY1O75610 366 aa17.55■□□□□ 0.4
UBE2D4-209ENST00000454428 HGFP14210 728 aa17.55■□□□□ 0.4
UBE2D4-209ENST00000454428 CCR1P32246 355 aa17.55■□□□□ 0.4
UBE2D4-209ENST00000454428 SYKP43405 635 aa17.55■□□□□ 0.4
UBE2D4-209ENST00000454428 ACADSBP45954 432 aa17.55■□□□□ 0.4
UBE2D4-209ENST00000454428 FMO5P49326 533 aa17.55■□□□□ 0.4
UBE2D4-209ENST00000454428 CCDC15Q0P6D6 951 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms