RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 SMYD2Q9NRG4 433 aa22.47■■□□□ 1.19
VSX1-205ENST00000429762 CXorf49A8MYA2 514 aaPredicted RBP22.47■■□□□ 1.19
VSX1-205ENST00000429762 MUSKO15146 869 aa22.47■■□□□ 1.19
VSX1-205ENST00000429762 CDH16O75309 829 aa22.47■■□□□ 1.19
VSX1-205ENST00000429762 LATS1O95835 1130 aa22.47■■□□□ 1.19
VSX1-205ENST00000429762 GEMIN4P57678 1058 aaKnown RBP22.47■■□□□ 1.19
VSX1-205ENST00000429762 IHHQ14623 411 aa22.47■■□□□ 1.19
VSX1-205ENST00000429762 PPP2R2DQ66LE6 453 aa22.47■■□□□ 1.19
VSX1-205ENST00000429762 TPGS1Q6ZTW0 290 aa22.47■■□□□ 1.19
VSX1-205ENST00000429762 EXOC3L1Q86VI1 746 aa22.47■■□□□ 1.19
VSX1-205ENST00000429762 ZNF707Q96C28 371 aaPredicted RBP22.47■■□□□ 1.19
VSX1-205ENST00000429762 TMA16Q96EY4 203 aaKnown RBP22.47■■□□□ 1.19
VSX1-205ENST00000429762 TBL1YQ9BQ87 522 aa22.47■■□□□ 1.19
VSX1-205ENST00000429762 SELENOSQ9BQE4 189 aa22.47■■□□□ 1.19
VSX1-205ENST00000429762 MUC3BQ9H195 1237 aa22.47■■□□□ 1.19
VSX1-205ENST00000429762 ATP13A1Q9HD20 1204 aa22.47■■□□□ 1.19
VSX1-205ENST00000429762 LGALS13Q9UHV8 139 aa22.47■■□□□ 1.19
VSX1-205ENST00000429762 PDE4DIPQ5VU43 2346 aa22.46■■□□□ 1.19
VSX1-205ENST00000429762 H0Y626 953 aa22.46■■□□□ 1.19
VSX1-205ENST00000429762 ATP9BO43861 1147 aa22.46■■□□□ 1.19
VSX1-205ENST00000429762 MZF1P28698 734 aaPredicted RBP22.46■■□□□ 1.19
VSX1-205ENST00000429762 CD86P42081 329 aa22.46■■□□□ 1.19
VSX1-205ENST00000429762 NRIP1P48552 1158 aa22.46■■□□□ 1.19
VSX1-205ENST00000429762 OXCT1P55809 520 aa22.46■■□□□ 1.19
VSX1-205ENST00000429762 PPP2R2AP63151 447 aa22.46■■□□□ 1.19
VSX1-205ENST00000429762 TEX26Q8N6G2 289 aa22.46■■□□□ 1.19
VSX1-205ENST00000429762 HJURPQ8NCD3 748 aaPredicted RBP22.46■■□□□ 1.19
VSX1-205ENST00000429762 TLE6Q9H808 572 aa22.46■■□□□ 1.19
VSX1-205ENST00000429762 IL1RAPL1Q9NZN1 696 aa22.46■■□□□ 1.19
VSX1-205ENST00000429762 MYLKQ15746 1914 aa22.46■■□□□ 1.19
VSX1-205ENST00000429762 CCDC78A2IDD5 438 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 ERI2A8K979 691 aaKnown RBP22.45■■□□□ 1.18
VSX1-205ENST00000429762 GFRA2O00451 464 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 XYLBO75191 536 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 FAM155BO75949 473 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 ANXA9O76027 345 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 C1RP00736 705 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 C1QAP02745 245 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 GEMP55040 296 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 KLHL38Q2WGJ6 581 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 TMCO4Q5TGY1 634 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 HTR3DQ70Z44 454 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 CMTM8Q8IZV2 173 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 TDRD5Q8NAT2 981 aaKnown RBP22.45■■□□□ 1.18
VSX1-205ENST00000429762 MDM1Q8TC05 714 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 ZSWIM3Q96MP5 696 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 SLC17A6Q9P2U8 582 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 AAR2Q9Y312 384 aaKnown RBP22.45■■□□□ 1.18
VSX1-205ENST00000429762 ILVBLA1L0T0 632 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 CBX4O00257 560 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 SNAP91O60641 907 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 UGT1A9O60656 530 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 PRAMEF12O95522 483 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 MMP2P08253 660 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 HNRNPA1P09651 372 aaKnown RBP eCLIP22.45■■□□□ 1.18
VSX1-205ENST00000429762 CEBPBP17676 345 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 HOXA9P31269 272 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 STX2P32856 288 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 AVPR1AP37288 418 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 CHRNA4P43681 627 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 PRSS36Q5K4E3 855 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 CTAGE3PQ8IX95 158 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 FAM217AQ8IXS0 508 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 KLHDC8BQ8IXV7 354 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 DDI1Q8WTU0 396 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 DCAKDQ8WVC6 231 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 USP13Q92995 863 aaPredicted RBP22.45■■□□□ 1.18
VSX1-205ENST00000429762 FATE1Q969F0 183 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 MRGPRX2Q96LB1 330 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 CYTH2Q99418 400 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 PRKD2Q9BZL6 878 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 SLC25A51Q9H1U9 297 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 UGT1A7Q9HAW7 530 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 UGT1A10Q9HAW8 530 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 UGT1A8Q9HAW9 530 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 ARHGAP26Q9UNA1 814 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 TBC1D30Q9Y2I9 924 aa22.45■■□□□ 1.18
VSX1-205ENST00000429762 KDELR3O43731 214 aa22.44■■□□□ 1.18
VSX1-205ENST00000429762 LUC7L3O95232 432 aaKnown RBP22.44■■□□□ 1.18
VSX1-205ENST00000429762 IFNAR2P48551 515 aa22.44■■□□□ 1.18
VSX1-205ENST00000429762 GUCY1A3Q02108 690 aa22.44■■□□□ 1.18
VSX1-205ENST00000429762 ZNF235Q14590 738 aa22.44■■□□□ 1.18
VSX1-205ENST00000429762 CBX2Q14781 532 aaPredicted RBP22.44■■□□□ 1.18
VSX1-205ENST00000429762 TERF2Q15554 542 aa22.44■■□□□ 1.18
VSX1-205ENST00000429762 ARHGAP15Q53QZ3 475 aa22.44■■□□□ 1.18
VSX1-205ENST00000429762 TTC39BQ5VTQ0 682 aaPredicted RBP22.44■■□□□ 1.18
VSX1-205ENST00000429762 NAPEPLDQ6IQ20 393 aa22.44■■□□□ 1.18
VSX1-205ENST00000429762 PDE12Q6L8Q7 609 aaKnown RBP22.44■■□□□ 1.18
VSX1-205ENST00000429762 KDELC1Q6UW63 502 aa22.44■■□□□ 1.18
VSX1-205ENST00000429762 LINGO4Q6UY18 593 aa22.44■■□□□ 1.18
VSX1-205ENST00000429762 SETD3Q86TU7 594 aaPredicted RBP22.44■■□□□ 1.18
VSX1-205ENST00000429762 RNF135Q8IUD6 432 aa22.44■■□□□ 1.18
VSX1-205ENST00000429762 SRRM1Q8IYB3 904 aaKnown RBP22.44■■□□□ 1.18
VSX1-205ENST00000429762 PPM1NQ8N819 430 aa22.44■■□□□ 1.18
VSX1-205ENST00000429762 VN1R2Q8NFZ6 395 aa22.44■■□□□ 1.18
VSX1-205ENST00000429762 GSDMBQ8TAX9 411 aa22.44■■□□□ 1.18
VSX1-205ENST00000429762 IMP4Q96G21 291 aaKnown RBP22.44■■□□□ 1.18
VSX1-205ENST00000429762 STMN4Q9H169 189 aaPredicted RBP22.44■■□□□ 1.18
VSX1-205ENST00000429762 TASP1Q9H6P5 420 aa22.44■■□□□ 1.18
VSX1-205ENST00000429762 PSMC3IPQ9P2W1 217 aaPredicted RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms