RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 PUS10Q3MIT2 529 aaKnown RBP12.3□□□□□ -0.44
USF1-203ENST00000368021 ARHGAP15Q53QZ3 475 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 FAXCQ5TGI0 409 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 ARHGAP36Q6ZRI8 547 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 HTR3DQ70Z44 454 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 GPR149Q86SP6 731 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 SDCCAG8Q86SQ7 713 aaPredicted RBP12.3□□□□□ -0.44
USF1-203ENST00000368021 SETD3Q86TU7 594 aaPredicted RBP12.3□□□□□ -0.44
USF1-203ENST00000368021 TAB3Q8N5C8 712 aaPredicted RBP12.3□□□□□ -0.44
USF1-203ENST00000368021 SUSD6Q92537 303 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 WBP2Q969T9 261 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 ZNF707Q96C28 371 aaPredicted RBP12.3□□□□□ -0.44
USF1-203ENST00000368021 HMCESQ96FZ2 354 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 RSRC1Q96IZ7 334 aaKnown RBP12.3□□□□□ -0.44
USF1-203ENST00000368021 PRICKLE1Q96MT3 831 aaPredicted RBP12.3□□□□□ -0.44
USF1-203ENST00000368021 SERPINB12Q96P63 405 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 SLC46A2Q9BY10 475 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 MAGEH1Q9H213 219 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 ACTR5Q9H9F9 607 aaPredicted RBP12.3□□□□□ -0.44
USF1-203ENST00000368021 XAB2Q9HCS7 855 aaKnown RBP12.3□□□□□ -0.44
USF1-203ENST00000368021 DNAJC17Q9NVM6 304 aaKnown RBP12.3□□□□□ -0.44
USF1-203ENST00000368021 NINJ2Q9NZG7 142 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 FAM50BQ9Y247 325 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 FAM169AQ9Y6X4 670 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 CUL9Q8IWT3 2517 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 LIN7AO14910 233 aaPredicted RBP12.3□□□□□ -0.44
USF1-203ENST00000368021 CACNG3O60359 315 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 MOSPD3O75425 235 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 JCHAINP01591 159 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 MLNP12872 115 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 PSMB4P28070 264 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 MAGEA3P43357 314 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 MAGEA8P43361 318 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 IFNAR2P48551 515 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 NTHL1P78549 312 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 GAD2Q05329 585 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 TNK2Q07912 1038 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 ZNF844Q08AG5 666 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 SERINC3Q13530 473 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 HNRNPDQ14103 355 aaKnown RBP12.3□□□□□ -0.44
USF1-203ENST00000368021 KYNUQ16719 465 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 FNBP1LQ5T0N5 605 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 C6orf118Q5T5N4 469 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 GRASPQ7Z6J2 395 aaPredicted RBP12.3□□□□□ -0.44
USF1-203ENST00000368021 CROCCP2Q86T23 111 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 CIR1Q86X95 450 aaPredicted RBP12.3□□□□□ -0.44
USF1-203ENST00000368021 KLHDC8BQ8IXV7 354 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 ZBED8Q8IZ13 594 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 CMTM8Q8IZV2 173 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 LRRC39Q96DD0 335 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 RIPOR3Q96MK2 946 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 PPP1R2P1Q96PQ5 205 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 UHRF1Q96T88 793 aaPredicted RBP12.3□□□□□ -0.44
USF1-203ENST00000368021 TMEM109Q9BVC6 243 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 CEP41Q9BYV8 373 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 TASP1Q9H6P5 420 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 TBC1D30Q9Y2I9 924 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 HELZP42694 1942 aaKnown RBP12.29□□□□□ -0.44
USF1-203ENST00000368021 H3BQF6 201 aa12.29□□□□□ -0.44
USF1-203ENST00000368021 NRG2O14511 850 aaPredicted RBP12.29□□□□□ -0.44
USF1-203ENST00000368021 ZNF197O14709 1029 aa12.29□□□□□ -0.44
USF1-203ENST00000368021 ZBTB24O43167 697 aaPredicted RBP12.29□□□□□ -0.44
USF1-203ENST00000368021 ACSL3O95573 720 aa12.29□□□□□ -0.44
USF1-203ENST00000368021 PEX11BO96011 259 aa12.29□□□□□ -0.44
USF1-203ENST00000368021 TSHRP16473 764 aa12.29□□□□□ -0.44
USF1-203ENST00000368021 GJA1P17302 382 aa12.29□□□□□ -0.44
USF1-203ENST00000368021 CD68P34810 354 aaPredicted RBP12.29□□□□□ -0.44
USF1-203ENST00000368021 AVPR1AP37288 418 aa12.29□□□□□ -0.44
USF1-203ENST00000368021 RENBPP51606 427 aa12.29□□□□□ -0.44
USF1-203ENST00000368021 RPS24P62847 133 aaKnown RBP12.29□□□□□ -0.44
USF1-203ENST00000368021 MSS51Q4VC12 460 aa12.29□□□□□ -0.44
USF1-203ENST00000368021 PRSS36Q5K4E3 855 aa12.29□□□□□ -0.44
USF1-203ENST00000368021 STXBP5Q5T5C0 1151 aa12.29□□□□□ -0.44
USF1-203ENST00000368021 GPR158Q5T848 1215 aa12.29□□□□□ -0.44
USF1-203ENST00000368021 CAND1Q86VP6 1230 aaKnown RBP12.29□□□□□ -0.44
USF1-203ENST00000368021 CFAP52Q8N1V2 620 aa12.29□□□□□ -0.44
USF1-203ENST00000368021 CPXM2Q8N436 756 aa12.29□□□□□ -0.44
USF1-203ENST00000368021 CNTD1Q8N815 330 aa12.29□□□□□ -0.44
USF1-203ENST00000368021 ST13P5Q8NFI4 369 aaPredicted RBP12.29□□□□□ -0.44
USF1-203ENST00000368021 C9orf72Q96LT7 481 aa12.29□□□□□ -0.44
USF1-203ENST00000368021 AGAP3Q96P47 875 aa12.29□□□□□ -0.44
USF1-203ENST00000368021 COL25A1Q9BXS0 654 aaPredicted RBP12.29□□□□□ -0.44
USF1-203ENST00000368021 CD320Q9NPF0 282 aa12.29□□□□□ -0.44
USF1-203ENST00000368021 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.28□□□□□ -0.44
USF1-203ENST00000368021 ILVBLA1L0T0 632 aa12.28□□□□□ -0.44
USF1-203ENST00000368021 TYW5A2RUC4 315 aaKnown RBP12.28□□□□□ -0.44
USF1-203ENST00000368021 GOLGA6CA6NDK9 693 aa12.28□□□□□ -0.44
USF1-203ENST00000368021 GOLGA6L10A6NI86 522 aa12.28□□□□□ -0.44
USF1-203ENST00000368021 GOLGA8KD6RF30 607 aa12.28□□□□□ -0.44
USF1-203ENST00000368021 SUN1O94901 812 aa12.28□□□□□ -0.44
USF1-203ENST00000368021 AP2A1O95782 977 aa12.28□□□□□ -0.44
USF1-203ENST00000368021 GOLGA6DP0CG33 693 aa12.28□□□□□ -0.44
USF1-203ENST00000368021 ETFBP38117 255 aa12.28□□□□□ -0.44
USF1-203ENST00000368021 GNA12Q03113 381 aa12.28□□□□□ -0.44
USF1-203ENST00000368021 IL10RBQ08334 325 aa12.28□□□□□ -0.44
USF1-203ENST00000368021 ZNF177Q13360 481 aaPredicted RBP12.28□□□□□ -0.44
USF1-203ENST00000368021 FASTKD3Q14CZ7 662 aaKnown RBP12.28□□□□□ -0.44
USF1-203ENST00000368021 SLC5A9Q2M3M2 681 aa12.28□□□□□ -0.44
USF1-203ENST00000368021 CEP85LQ5SZL2 805 aa12.28□□□□□ -0.44
USF1-203ENST00000368021 FAM182AQ5T1J6 154 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms