RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-208	ENST00000578178	L1CAM	P32004	1257 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	DRD3	P35462	400 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	SERPINH1	P50454	418 aa	Known RBP	11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	ADPRH	P54922	357 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	ARF5	P84085	180 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	ZBED6	P86452	979 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	GRIK2	Q13002	908 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	UAP1L1	Q3KQV9	507 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	FAM46C	Q5VWP2	391 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	HGSNAT	Q68CP4	663 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	RETSAT	Q6NUM9	610 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	NCEH1	Q6PIU2	408 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	LINGO4	Q6UY18	593 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	VPS36	Q86VN1	386 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	DNAAF5	Q86Y56	855 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	MINDY1	Q8N5J2	469 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	OR2T34	Q8NGX1	318 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	FNIP1	Q8TF40	1166 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	FAM131C	Q96AQ9	280 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	BIRC7	Q96CA5	298 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	ZNF653	Q96CK0	615 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	EPAS1	Q99814	870 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	SPON2	Q9BUD6	331 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	ZDHHC5	Q9C0B5	715 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	NEUROG2	Q9H2A3	272 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	NDFIP2	Q9NV92	336 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	CNOT8	Q9UFF9	292 aa	Known RBP	11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	FZD10	Q9ULW2	581 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	CAPN11	Q9UMQ6	739 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	BZW2	Q9Y6E2	419 aa	Known RBP	11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	SCIN	Q9Y6U3	715 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	CXorf51A	A0A1B0GTR3	108 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	FAM47DP	A6NHR8	397 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	SLC7A4	O43246	635 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	SMAD6	O43541	496 aa	Known RBP	11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	OPHN1	O60890	802 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	RAMP2	O60895	175 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	SERPING1	P05155	500 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	IGHV4-34	P06331	123 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	CD27	P26842	260 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	EPHB2	P29323	1055 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	ACVRL1	P37023	503 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	METAP1	P53582	386 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	GALC	P54803	685 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	SLC20A2	Q08357	652 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	ZNF252P-AS1	Q0IIN9	211 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	SEMA3B	Q13214	749 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	PYROXD2	Q8N2H3	581 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	RTL3	Q8N8U3	475 aa	Known RBP	11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	OR2A12	Q8NGT7	310 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	OR14C36	Q8NHC7	312 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	C1orf216	Q8TAB5	229 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	PIP4K2C	Q8TBX8	421 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	ARHGEF2	Q92974	986 aa	Known RBP	11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	ACE2	Q9BYF1	805 aa	Predicted RBP	11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	MAGEB5	Q9BZ81	275 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	XPO4	Q9C0E2	1151 aa	Known RBP	11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	CEP44	Q9C0F1	390 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	ISCU	Q9H1K1	167 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	MAGEH1	Q9H213	219 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	TSPY26P	Q9H489	355 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	OSGEP	Q9NPF4	335 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	DNAAF2	Q9NVR5	837 aa	Known RBP	11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	DNAI1	Q9UI46	699 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	SARDH	Q9UL12	918 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	PPM1H	Q9ULR3	514 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	TPX2	Q9ULW0	747 aa	Known RBP	11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	SLCO1B1	Q9Y6L6	691 aa		11.17	□□□□□ -0.62
PPP4R1-208	ENST00000578178	TMEM191C	A6NGB0	347 aa		11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	C10orf142	B7Z368	130 aa		11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	FGF10	O15520	208 aa	Predicted RBP	11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	CBFA2T2	O43439	604 aa		11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	CREB3	O43889	395 aa		11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	KCNK5	O95279	499 aa		11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	PRNP	P04156	253 aa		11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	CTSL	P07711	333 aa		11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	ADRB1	P08588	477 aa		11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	CSRP1	P21291	193 aa	Known RBP	11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	CHRNA3	P32297	505 aa		11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	HTR7	P34969	479 aa		11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	RECQL	P46063	649 aa	Predicted RBP	11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	GRIA4	P48058	902 aa		11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	NOVA1	P51513	510 aa	Known RBP	11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	CCR5	P51681	352 aa		11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	AFF3	P51826	1226 aa	Known RBP	11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	GEMIN4	P57678	1058 aa	Known RBP	11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	TEAD4	Q15561	434 aa		11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	POM121L1P	Q3SYA9	428 aa		11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	AGBL4	Q5VU57	503 aa		11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	PSAPL1	Q6NUJ1	521 aa		11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	PCDH20	Q8N6Y1	951 aa	Known RBP	11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	OR2I1P	Q8NGU4	316 aa		11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	CPLX3	Q8WVH0	158 aa		11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	ORAI3	Q9BRQ5	295 aa		11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	TRIM7	Q9C029	511 aa		11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	TNKS2	Q9H2K2	1166 aa		11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	KDM4C	Q9H3R0	1056 aa		11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	CATSPERB	Q9H7T0	1116 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 240 ms