RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 CCL7P80098 99 aa14.25□□□□□ -0.13
NKX3-1-202ENST00000523261 EIF2B5Q13144 721 aaKnown RBP14.25□□□□□ -0.13
NKX3-1-202ENST00000523261 ZNF394Q53GI3 561 aa14.25□□□□□ -0.13
NKX3-1-202ENST00000523261 DCAF6Q58WW2 860 aa14.25□□□□□ -0.13
NKX3-1-202ENST00000523261 FAM26FQ5R3K3 315 aa14.25□□□□□ -0.13
NKX3-1-202ENST00000523261 FHL5Q5TD97 284 aa14.25□□□□□ -0.13
NKX3-1-202ENST00000523261 RBFAQ8N0V3 343 aa14.25□□□□□ -0.13
NKX3-1-202ENST00000523261 HEXIM2Q96MH2 286 aaKnown RBP14.25□□□□□ -0.13
NKX3-1-202ENST00000523261 TMEM74Q96NL1 305 aa14.25□□□□□ -0.13
NKX3-1-202ENST00000523261 CLIC6Q96NY7 704 aa14.25□□□□□ -0.13
NKX3-1-202ENST00000523261 DDX50Q9BQ39 737 aaKnown RBP14.25□□□□□ -0.13
NKX3-1-202ENST00000523261 PANK2Q9BZ23 570 aa14.25□□□□□ -0.13
NKX3-1-202ENST00000523261 TCEAL2Q9H3H9 227 aaPredicted RBP14.25□□□□□ -0.13
NKX3-1-202ENST00000523261 ZNF768Q9H5H4 540 aaKnown RBP14.25□□□□□ -0.13
NKX3-1-202ENST00000523261 CGNQ9P2M7 1197 aaKnown RBP14.25□□□□□ -0.13
NKX3-1-202ENST00000523261 SPASTQ9UBP0 616 aa14.25□□□□□ -0.13
NKX3-1-202ENST00000523261 F8P00451 2351 aa14.25□□□□□ -0.13
NKX3-1-202ENST00000523261 UNC13CQ8NB66 2214 aa14.25□□□□□ -0.13
NKX3-1-202ENST00000523261 SPINT1O43278 529 aa14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 ATP9BO43861 1147 aa14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 KRT7P08729 469 aa14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 COL8A1P27658 744 aa14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 CD82P27701 267 aa14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 GJB2P29033 226 aa14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 DCTP40126 519 aa14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 PIK3CAP42336 1068 aa14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 VASPP50552 380 aaPredicted RBP14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 MLLT10P55197 1068 aa14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 ADKP55263 362 aaKnown RBP14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 TBX4P57082 545 aa14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 SULT2A1Q06520 285 aa14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 ADIGQ0VDE8 80 aa14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 C1orf61Q13536 156 aa14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 FGL2Q14314 439 aa14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 ARHGAP17Q68EM7 881 aa14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 CAPRIN2Q6IMN6 1127 aaKnown RBP14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 Q6ZVU0 165 aa14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 SDR16C5Q8N3Y7 309 aa14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 ANKRD52Q8NB46 1076 aa14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 JPH3Q8WXH2 748 aaPredicted RBP14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 CCDC74AQ96AQ1 378 aa14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 SRRTQ9BXP5 876 aaKnown RBP14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 DNAI2Q9GZS0 605 aa14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 TFIP11Q9UBB9 837 aaKnown RBP14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 IPO11Q9UI26 975 aaKnown RBP14.24□□□□□ -0.13
NKX3-1-202ENST00000523261 AGRPO00253 132 aa14.23□□□□□ -0.13
NKX3-1-202ENST00000523261 RAD51BO15315 384 aa14.23□□□□□ -0.13
NKX3-1-202ENST00000523261 PCDH8O95206 1070 aa14.23□□□□□ -0.13
NKX3-1-202ENST00000523261 RPLP0P05388 317 aaKnown RBP14.23□□□□□ -0.13
NKX3-1-202ENST00000523261 CTSLP07711 333 aa14.23□□□□□ -0.13
NKX3-1-202ENST00000523261 ZNF18P17022 549 aa14.23□□□□□ -0.13
NKX3-1-202ENST00000523261 NOS2P35228 1153 aa14.23□□□□□ -0.13
NKX3-1-202ENST00000523261 RABIFP47224 123 aa14.23□□□□□ -0.13
NKX3-1-202ENST00000523261 MAPK10P53779 464 aa14.23□□□□□ -0.13
NKX3-1-202ENST00000523261 SLC12A1Q13621 1099 aa14.23□□□□□ -0.13
NKX3-1-202ENST00000523261 PDE1CQ14123 709 aaPredicted RBP14.23□□□□□ -0.13
NKX3-1-202ENST00000523261 ACCSLQ4AC99 568 aa14.23□□□□□ -0.13
NKX3-1-202ENST00000523261 PRRT3Q5FWE3 981 aa14.23□□□□□ -0.13
NKX3-1-202ENST00000523261 ESRP1Q6NXG1 681 aaKnown RBP14.23□□□□□ -0.13
NKX3-1-202ENST00000523261 BTN2A2Q8WVV5 523 aa14.23□□□□□ -0.13
NKX3-1-202ENST00000523261 ERCC4Q92889 916 aaPredicted RBP14.23□□□□□ -0.13
NKX3-1-202ENST00000523261 TATDN2Q93075 761 aa14.23□□□□□ -0.13
NKX3-1-202ENST00000523261 CATSPER2Q96P56 530 aa14.23□□□□□ -0.13
NKX3-1-202ENST00000523261 IPO9Q96P70 1041 aaKnown RBP14.23□□□□□ -0.13
NKX3-1-202ENST00000523261 BACH2Q9BYV9 841 aa14.23□□□□□ -0.13
NKX3-1-202ENST00000523261 CPEB1Q9BZB8 566 aaKnown RBP14.23□□□□□ -0.13
NKX3-1-202ENST00000523261 NIF3L1Q9GZT8 377 aa14.23□□□□□ -0.13
NKX3-1-202ENST00000523261 LRRC4Q9HBW1 653 aa14.23□□□□□ -0.13
NKX3-1-202ENST00000523261 SRPRBQ9Y5M8 271 aaKnown RBP14.23□□□□□ -0.13
NKX3-1-202ENST00000523261 XPO1O14980 1071 aaKnown RBP14.22□□□□□ -0.13
NKX3-1-202ENST00000523261 YY2O15391 372 aa14.22□□□□□ -0.13
NKX3-1-202ENST00000523261 ANXA6P08133 673 aa14.22□□□□□ -0.13
NKX3-1-202ENST00000523261 PDGFRAP16234 1089 aa14.22□□□□□ -0.13
NKX3-1-202ENST00000523261 SLC8A3P57103 927 aa14.22□□□□□ -0.13
NKX3-1-202ENST00000523261 ZFP36L1Q07352 338 aaKnown RBP14.22□□□□□ -0.13
NKX3-1-202ENST00000523261 KLRB1Q12918 225 aa14.22□□□□□ -0.13
NKX3-1-202ENST00000523261 DLG2Q15700 870 aa14.22□□□□□ -0.13
NKX3-1-202ENST00000523261 C1orf220Q5T0J3 134 aa14.22□□□□□ -0.13
NKX3-1-202ENST00000523261 KYQ8NBH2 561 aa14.22□□□□□ -0.13
NKX3-1-202ENST00000523261 SLC4A11Q8NBS3 891 aa14.22□□□□□ -0.13
NKX3-1-202ENST00000523261 NKD1Q969G9 470 aa14.22□□□□□ -0.13
NKX3-1-202ENST00000523261 TMEM159Q96B96 161 aa14.22□□□□□ -0.13
NKX3-1-202ENST00000523261 ABHD17AQ96GS6 310 aa14.22□□□□□ -0.13
NKX3-1-202ENST00000523261 FCRL2Q96LA5 508 aaPredicted RBP14.22□□□□□ -0.13
NKX3-1-202ENST00000523261 TBATAQ96M53 351 aa14.22□□□□□ -0.13
NKX3-1-202ENST00000523261 EPAS1Q99814 870 aa14.22□□□□□ -0.13
NKX3-1-202ENST00000523261 LRRC61Q9BV99 259 aa14.22□□□□□ -0.13
NKX3-1-202ENST00000523261 SLC17A9Q9BYT1 436 aa14.22□□□□□ -0.13
NKX3-1-202ENST00000523261 B3GNT4Q9C0J1 378 aa14.22□□□□□ -0.13
NKX3-1-202ENST00000523261 CLPBQ9H078 707 aa14.22□□□□□ -0.13
NKX3-1-202ENST00000523261 LRRN3Q9H3W5 708 aa14.22□□□□□ -0.13
NKX3-1-202ENST00000523261 APOBEC3BQ9UH17 382 aaKnown RBP14.22□□□□□ -0.13
NKX3-1-202ENST00000523261 PNMA8BQ9ULN7 279 aaPredicted RBP14.22□□□□□ -0.13
NKX3-1-202ENST00000523261 ZFHX3Q15911 3703 aa14.21□□□□□ -0.13
NKX3-1-202ENST00000523261 PRR19A6NJB7 356 aa14.21□□□□□ -0.13
NKX3-1-202ENST00000523261 STMND1H3BQB6 276 aa14.21□□□□□ -0.13
NKX3-1-202ENST00000523261 KPNA3O00505 521 aaPredicted RBP14.21□□□□□ -0.13
NKX3-1-202ENST00000523261 SEMA7AO75326 666 aa14.21□□□□□ -0.13
NKX3-1-202ENST00000523261 PAK4O96013 591 aaPredicted RBP14.21□□□□□ -0.13
NKX3-1-202ENST00000523261 LIFP15018 202 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms