RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 ZBED1O96006 694 aa11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 PAK4O96013 591 aaPredicted RBP11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 CELA2BP08218 269 aaPredicted RBP11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 PDGFRAP16234 1089 aa11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 ASPAP45381 313 aa11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 ANAPC15P60006 121 aa11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 EIF2B5Q13144 721 aaKnown RBP11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 FGL2Q14314 439 aa11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 PIP5KL1Q5T9C9 394 aa11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 STXBP4Q6ZWJ1 553 aa11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 DCP2Q8IU60 420 aaKnown RBP11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 ZNF557Q8N988 423 aaPredicted RBP11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 KYQ8NBH2 561 aa11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 FRS2Q8WU20 508 aa11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 NKD1Q969G9 470 aa11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 HEXIM2Q96MH2 286 aaKnown RBP11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 NUCKS1Q9H1E3 243 aaKnown RBP11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 LRRN3Q9H3W5 708 aa11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 STK17AQ9UEE5 414 aa11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 CCDC39Q9UFE4 941 aa11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 GGT7Q9UJ14 662 aa11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 LIMCH1Q9UPQ0 1083 aa11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 DOLKQ9UPQ8 538 aa11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 CRYBG3Q68DQ2 2970 aa11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 TTLL8A6PVC2 850 aa11.34□□□□□ -0.59
CTNNA1-234ENST00000522227 EFCAB7A8K855 629 aa11.34□□□□□ -0.59
CTNNA1-234ENST00000522227 STMND1H3BQB6 276 aa11.34□□□□□ -0.59
CTNNA1-234ENST00000522227 TULP2O00295 520 aa11.34□□□□□ -0.59
CTNNA1-234ENST00000522227 SPTLC2O15270 562 aa11.34□□□□□ -0.59
CTNNA1-234ENST00000522227 YY2O15391 372 aa11.34□□□□□ -0.59
CTNNA1-234ENST00000522227 TGFB1I1O43294 461 aa11.34□□□□□ -0.59
CTNNA1-234ENST00000522227 LUC7L3O95232 432 aaKnown RBP11.34□□□□□ -0.59
CTNNA1-234ENST00000522227 MOCS2O96007 188 aaPredicted RBP11.34□□□□□ -0.59
CTNNA1-234ENST00000522227 C4BPAP04003 597 aaKnown RBP11.34□□□□□ -0.59
CTNNA1-234ENST00000522227 CCKBRP32239 447 aa11.34□□□□□ -0.59
CTNNA1-234ENST00000522227 SGSM1Q2NKQ1 1148 aa11.34□□□□□ -0.59
CTNNA1-234ENST00000522227 DCAF6Q58WW2 860 aa11.34□□□□□ -0.59
CTNNA1-234ENST00000522227 TMEM164Q5U3C3 297 aa11.34□□□□□ -0.59
CTNNA1-234ENST00000522227 BSPRYQ5W0U4 402 aa11.34□□□□□ -0.59
CTNNA1-234ENST00000522227 BHLHA9Q7RTU4 235 aa11.34□□□□□ -0.59
CTNNA1-234ENST00000522227 CCDC65Q8IXS2 484 aa11.34□□□□□ -0.59
CTNNA1-234ENST00000522227 MOCOSQ96EN8 888 aa11.34□□□□□ -0.59
CTNNA1-234ENST00000522227 LRRC61Q9BV99 259 aa11.34□□□□□ -0.59
CTNNA1-234ENST00000522227 CLPBQ9H078 707 aa11.34□□□□□ -0.59
CTNNA1-234ENST00000522227 PPM1HQ9ULR3 514 aa11.34□□□□□ -0.59
CTNNA1-234ENST00000522227 F8P00451 2351 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 SDK2Q58EX2 2172 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 WIPF3A6NGB9 483 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 YJEFN3A6XGL0 299 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 ZNF891A8MT65 544 aaPredicted RBP11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 E7ENQ6 273 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 RNF103O00237 685 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 IRAK2O43187 625 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 EXOC3O60645 756 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 CCL4P13236 92 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 TSHRP16473 764 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 PIK3CAP42336 1068 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 TBX4P57082 545 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 DLG4P78352 724 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 ADIGQ0VDE8 80 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 DLG2Q15700 870 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 EIF2S3LQ2VIR3 472 aaKnown RBP11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 ATP1A1-AS1Q5TC04 95 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 FAXCQ5TGI0 409 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 C16orf46Q6P387 395 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 KYAT3Q6YP21 454 aaKnown RBP11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 CIR1Q86X95 450 aaPredicted RBP11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 PHACTR4Q8IZ21 702 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 LGI2Q8N0V4 545 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 GALNT11Q8NCW6 608 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 PMEPA1Q969W9 287 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 CATSPER2Q96P56 530 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 IPO9Q96P70 1041 aaKnown RBP11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 CMKLR1Q99788 373 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 DYRK4Q9NR20 520 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 CUEDC1Q9NWM3 386 aaPredicted RBP11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 HS3ST3A1Q9Y663 406 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 RNF215Q9Y6U7 377 aa11.33□□□□□ -0.6
CTNNA1-234ENST00000522227 SETD2Q9BYW2 2564 aaPredicted RBP11.32□□□□□ -0.6
CTNNA1-234ENST00000522227 FRMD3A2A2Y4 597 aa11.32□□□□□ -0.6
CTNNA1-234ENST00000522227 LMO7DNF2Z398 122 aa11.32□□□□□ -0.6
CTNNA1-234ENST00000522227 PIK3R2O00459 728 aa11.32□□□□□ -0.6
CTNNA1-234ENST00000522227 RIOK3O14730 519 aaKnown RBP11.32□□□□□ -0.6
CTNNA1-234ENST00000522227 HLA-DRAP01903 254 aa11.32□□□□□ -0.6
CTNNA1-234ENST00000522227 CTSLP07711 333 aa11.32□□□□□ -0.6
CTNNA1-234ENST00000522227 CD82P27701 267 aa11.32□□□□□ -0.6
CTNNA1-234ENST00000522227 RABIFP47224 123 aa11.32□□□□□ -0.6
CTNNA1-234ENST00000522227 SEPT6Q14141 434 aa11.32□□□□□ -0.6
CTNNA1-234ENST00000522227 MS4A13Q5J8X5 152 aa11.32□□□□□ -0.6
CTNNA1-234ENST00000522227 RAB41Q5JT25 222 aa11.32□□□□□ -0.6
CTNNA1-234ENST00000522227 NEK5Q6P3R8 708 aa11.32□□□□□ -0.6
CTNNA1-234ENST00000522227 CCNJLQ8IV13 435 aa11.32□□□□□ -0.6
CTNNA1-234ENST00000522227 UNC45BQ8IWX7 931 aa11.32□□□□□ -0.6
CTNNA1-234ENST00000522227 CACNA2D3Q8IZS8 1091 aa11.32□□□□□ -0.6
CTNNA1-234ENST00000522227 PCDH19Q8TAB3 1148 aa11.32□□□□□ -0.6
CTNNA1-234ENST00000522227 PRR7Q8TB68 274 aa11.32□□□□□ -0.6
CTNNA1-234ENST00000522227 CPT1CQ8TCG5 803 aa11.32□□□□□ -0.6
CTNNA1-234ENST00000522227 BTN2A2Q8WVV5 523 aa11.32□□□□□ -0.6
CTNNA1-234ENST00000522227 APOBEC4Q8WW27 367 aaKnown RBP11.32□□□□□ -0.6
CTNNA1-234ENST00000522227 TATDN2Q93075 761 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms