RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 IL12RB1P42701 662 aa15.27■□□□□ 0.04
NUP54-213ENST00000513352 ATP5OP48047 213 aa15.27■□□□□ 0.04
NUP54-213ENST00000513352 ARF5P84085 180 aa15.27■□□□□ 0.04
NUP54-213ENST00000513352 GALNT2Q10471 571 aa15.27■□□□□ 0.04
NUP54-213ENST00000513352 AP1B1Q10567 949 aa15.27■□□□□ 0.04
NUP54-213ENST00000513352 SLC10A2Q12908 348 aaPredicted RBP15.27■□□□□ 0.04
NUP54-213ENST00000513352 PDK1Q15118 436 aa15.27■□□□□ 0.04
NUP54-213ENST00000513352 PTPRNQ16849 979 aa15.27■□□□□ 0.04
NUP54-213ENST00000513352 EOGTQ5NDL2 527 aa15.27■□□□□ 0.04
NUP54-213ENST00000513352 PKN3Q6P5Z2 889 aa15.27■□□□□ 0.04
NUP54-213ENST00000513352 SYT10Q6XYQ8 523 aa15.27■□□□□ 0.04
NUP54-213ENST00000513352 BZW1Q7L1Q6 419 aaKnown RBP15.27■□□□□ 0.04
NUP54-213ENST00000513352 ZSCAN30Q86W11 494 aa15.27■□□□□ 0.04
NUP54-213ENST00000513352 LRRN4Q8WUT4 740 aa15.27■□□□□ 0.04
NUP54-213ENST00000513352 NSMCE1Q8WV22 266 aa15.27■□□□□ 0.04
NUP54-213ENST00000513352 PBKQ96KB5 322 aa15.27■□□□□ 0.04
NUP54-213ENST00000513352 OSBPL9Q96SU4 736 aa15.27■□□□□ 0.04
NUP54-213ENST00000513352 FAM118BQ9BPY3 351 aa15.27■□□□□ 0.04
NUP54-213ENST00000513352 SLCO3A1Q9UIG8 710 aa15.27■□□□□ 0.04
NUP54-213ENST00000513352 HCN2Q9UL51 889 aa15.27■□□□□ 0.04
NUP54-213ENST00000513352 SNX12Q9UMY4 172 aa15.27■□□□□ 0.04
NUP54-213ENST00000513352 FCF1Q9Y324 198 aaKnown RBP15.27■□□□□ 0.04
NUP54-213ENST00000513352 RAD54BQ9Y620 910 aa15.27■□□□□ 0.04
NUP54-213ENST00000513352 MUC22E2RYF6 1773 aaPredicted RBP15.26■□□□□ 0.03
NUP54-213ENST00000513352 TTC34A8MYJ7 566 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 WASH3PC4AMC7 463 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 APOC4-APOC2K7ER74 178 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 K7ERQ8 282 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 NPC1O15118 1278 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 SYNCRIPO60506 623 aaKnown RBP15.26■□□□□ 0.03
NUP54-213ENST00000513352 ATG13O75143 517 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 ZMPSTE24O75844 475 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 MT-CO1P00395 513 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 APOC2P02655 101 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 ATXN8OSP0DMR3 200 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 SRCP12931 536 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 HOXB2P14652 356 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 RPS9P46781 194 aaKnown RBP15.26■□□□□ 0.03
NUP54-213ENST00000513352 NR2C2P49116 596 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 SERPINH1P50454 418 aaKnown RBP15.26■□□□□ 0.03
NUP54-213ENST00000513352 CLCN5P51795 746 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 ETF1P62495 437 aaKnown RBP15.26■□□□□ 0.03
NUP54-213ENST00000513352 IL10RBQ08334 325 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 FZD5Q13467 585 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 STARD3Q14849 445 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 LONRF2Q1L5Z9 754 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 TIGD7Q6NT04 549 aaPredicted RBP15.26■□□□□ 0.03
NUP54-213ENST00000513352 B4GALNT4Q76KP1 1039 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 ZC3H18Q86VM9 953 aaKnown RBP15.26■□□□□ 0.03
NUP54-213ENST00000513352 SLC13A5Q86YT5 568 aaPredicted RBP15.26■□□□□ 0.03
NUP54-213ENST00000513352 LRRC49Q8IUZ0 686 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 FBXL6Q8N531 539 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 SH2D3CQ8N5H7 860 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 KCNV2Q8TDN2 545 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 CLDN23Q96B33 292 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 MRGPRX3Q96LB0 322 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 CHRDQ9H2X0 955 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 SPATA6Q9NWH7 488 aaPredicted RBP15.26■□□□□ 0.03
NUP54-213ENST00000513352 SEPT10Q9P0V9 454 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 MMP17Q9ULZ9 603 aa15.26■□□□□ 0.03
NUP54-213ENST00000513352 TCRBV7S2A1N4TA0A589 114 aa15.25■□□□□ 0.03
NUP54-213ENST00000513352 SGK1O00141 431 aa15.25■□□□□ 0.03
NUP54-213ENST00000513352 MCF2LO15068 1137 aa15.25■□□□□ 0.03
NUP54-213ENST00000513352 MAFKO60675 156 aa15.25■□□□□ 0.03
NUP54-213ENST00000513352 TMCC1O94876 653 aa15.25■□□□□ 0.03
NUP54-213ENST00000513352 FGGP02679 453 aa15.25■□□□□ 0.03
NUP54-213ENST00000513352 TCP1P17987 556 aaKnown RBP15.25■□□□□ 0.03
NUP54-213ENST00000513352 MAGEA9P43362 315 aa15.25■□□□□ 0.03
NUP54-213ENST00000513352 EIF3EP60228 445 aaKnown RBP15.25■□□□□ 0.03
NUP54-213ENST00000513352 OTUD4Q01804 1114 aaKnown RBP15.25■□□□□ 0.03
NUP54-213ENST00000513352 SLC20A2Q08357 652 aa15.25■□□□□ 0.03
NUP54-213ENST00000513352 ZNF235Q14590 738 aa15.25■□□□□ 0.03
NUP54-213ENST00000513352 NOMO1Q15155 1222 aa15.25■□□□□ 0.03
NUP54-213ENST00000513352 DLG2Q15700 870 aa15.25■□□□□ 0.03
NUP54-213ENST00000513352 HSF5Q4G112 596 aaPredicted RBP15.25■□□□□ 0.03
NUP54-213ENST00000513352 TMCO4Q5TGY1 634 aa15.25■□□□□ 0.03
NUP54-213ENST00000513352 C22orf39Q6P5X5 142 aa15.25■□□□□ 0.03
NUP54-213ENST00000513352 Q6ZVU0 165 aa15.25■□□□□ 0.03
NUP54-213ENST00000513352 CCDC13Q8IYE1 715 aa15.25■□□□□ 0.03
NUP54-213ENST00000513352 TTC13Q8NBP0 860 aa15.25■□□□□ 0.03
NUP54-213ENST00000513352 ACTL9Q8TC94 416 aa15.25■□□□□ 0.03
NUP54-213ENST00000513352 TFB1MQ8WVM0 346 aaKnown RBP15.25■□□□□ 0.03
NUP54-213ENST00000513352 ZNF592Q92610 1267 aa15.25■□□□□ 0.03
NUP54-213ENST00000513352 HDAC11Q96DB2 347 aa15.25■□□□□ 0.03
NUP54-213ENST00000513352 LGMNQ99538 433 aa15.25■□□□□ 0.03
NUP54-213ENST00000513352 CINPQ9BW66 212 aaPredicted RBP15.25■□□□□ 0.03
NUP54-213ENST00000513352 TM6SF2Q9BZW4 377 aa15.25■□□□□ 0.03
NUP54-213ENST00000513352 TNKS2Q9H2K2 1166 aa15.25■□□□□ 0.03
NUP54-213ENST00000513352 MTG2Q9H4K7 406 aa15.25■□□□□ 0.03
NUP54-213ENST00000513352 POLR3BQ9NW08 1133 aaPredicted RBP15.25■□□□□ 0.03
NUP54-213ENST00000513352 SUN2Q9UH99 717 aa15.25■□□□□ 0.03
NUP54-213ENST00000513352 HS3ST2Q9Y278 367 aa15.25■□□□□ 0.03
NUP54-213ENST00000513352 ZDBF2Q9HCK1 2354 aa15.24■□□□□ 0.03
NUP54-213ENST00000513352 ZNF185O15231 689 aa15.24■□□□□ 0.03
NUP54-213ENST00000513352 SMAD6O43541 496 aaKnown RBP15.24■□□□□ 0.03
NUP54-213ENST00000513352 ATP9BO43861 1147 aa15.24■□□□□ 0.03
NUP54-213ENST00000513352 VAV1P15498 845 aa15.24■□□□□ 0.03
NUP54-213ENST00000513352 RECQLP46063 649 aaPredicted RBP15.24■□□□□ 0.03
NUP54-213ENST00000513352 CLCN6P51797 869 aa15.24■□□□□ 0.03
NUP54-213ENST00000513352 RHOAP61586 193 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms